Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BR04G23690
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR04G23690 | 1 |  |
| Tree-based ortholog | BR04G23690 BR05G05960 | 2 | ||
| Anchor point | BR05G05960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR04G23690 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00165G00210 | 1 | |
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL4G26490 | 1 | |
| Anchor point | 1-to-1 | AL4G26490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G26490 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT2G39870 | 1 | |
| Anchor point | 1-to-1 | AT2G39870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G39870 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV2G06150 | 1 | |
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_004G21270 | 1 | |
| Anchor point | 1-to-1 | CRU_004G21270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G21270 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00019G02430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G02430 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL07G03080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G00860 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00021G01630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G01630 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00008G02060 CM00097G00040 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00097G00040 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0010G08580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G08580 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G28490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G28490 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G41990 GM11G34710 GM14G06920 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G03580 GM11G34710 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR11G27460 GR12G07370 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G07370 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ6G004210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G004210 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD01G013070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD01G013070 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME06908G00070 ME08265G02690 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06908G00070 ME08265G02690 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT3G069670 MT5G081460 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G069670 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G63050 | 1 | |
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT08G06220 PT10G19580 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G19580 PT08G06220 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G23380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23380 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-many | RC29610G00010 RC29610G00020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29610G00010 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL10G084970 | 1 | |
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST10G023850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G014770 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP4G22160 | 1 | |
| Anchor point | 1-to-1 | TP4G22160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G22160 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0010G02840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G02840 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV13G04360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G04360 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G25510 ZM08G14320 | 2 | |