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Integrative Orthology Viewer:
ATR_00080G00460
(Amborella trichopoda)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | ATR_00080G00460 | 1 |  |
| Tree-based ortholog | ATR_00080G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ATR_00080G00460 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL8G26450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G26450 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G37080 | 1 | |
| Tree-based ortholog | 1-to-many | AT3G53350 AT2G37080 AT5G60210 | 3 | ||
| Anchor point | N/A | AT5G60210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G37080 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G13850 | 1 | |
| Tree-based ortholog | 1-to-many | BV0G13850 BV0G78020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G13850 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR03G18280 BR05G08070 | 2 | |
| Tree-based ortholog | 1-to-many | BR05G08070 BR03G18280 BR02G11730 ... | 4 | ||
| Anchor point | N/A | BR03G10100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G08070 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_004G18380 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_005G18700 CRU_004G18380 CRU_005G17630 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G18380 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00318G00020 | 1 | |
| Tree-based ortholog | 1-to-many | CP00045G00360 CP00318G00020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00318G00020 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL04G08660 CL10G18530 | 2 | |
| Tree-based ortholog | 1-to-many | CL04G08660 CL10G18530 CL03G02450 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G18530 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00014G01700 | 1 | |
| Tree-based ortholog | 1-to-many | CS00115G00150 CS00014G01700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00014G01700 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00004G03530 CM00022G00640 | 2 | |
| Tree-based ortholog | 1-to-many | CM00022G00640 CM00004G03530 CM00082G00640 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00004G03530 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0002G19770 | 1 | |
| Tree-based ortholog | 1-to-many | EG0011G27040 EG0002G19770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G27040 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV6G48200 FV3G29880 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G48200 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM11G15780 | 1 | |
| Tree-based ortholog | 1-to-many | GM19G36260 GM03G33540 GM13G20020 ... | 8 | ||
| Anchor point | N/A | GM11G15780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G36260 GM13G20020 GM10G05670 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G25010 GR04G06630 GR06G12120 ... | 4 | |
| Tree-based ortholog | 1-to-many | GR04G06630 GR02G25010 GR09G42030 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G16860 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G032100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G032100 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD03G008260 MD11G009600 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G190700 MD04G006960 MD12G011530 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G190700 MD12G011530 MD04G006960 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME00506G00080 ME03537G00110 ME03750G00590 | 3 | |
| Tree-based ortholog | 1-to-many | ME05133G00110 ME03537G00110 ME03750G00590 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05133G00110 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT1G066850 MT7G061150 MT7G100730 | 3 | |
| Tree-based ortholog | 1-to-many | MT7G100730 MT1G066850 MT4G461060 ... | 4 | ||
| Anchor point | N/A | MT4G461060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G100730 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G61760 | 1 | |
| Tree-based ortholog | 1-to-1 | OS01G61760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G61760 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT16G08590 | 1 | |
| Tree-based ortholog | 1-to-many | PT06G13140 PT16G08590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G08590 PT06G13140 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G09150 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_006G24950 PPE_006G09150 | 2 | ||
| Anchor point | N/A | PPE_006G09150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G24950 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29688G00010 | 1 | |
| Tree-based ortholog | 1-to-many | RC29805G00150 RC29688G00010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29805G00150 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL09G007360 SL10G084290 SL10G086030 | 3 | |
| Tree-based ortholog | 1-to-many | SL10G086030 SL10G084290 SL09G007360 ... | 4 | ||
| Anchor point | N/A | SL11G072490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G086030 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST09G006870 ST10G024710 ST10G028720 | 3 | |
| Tree-based ortholog | 1-to-many | ST10G028720 ST10G024710 ST09G006870 ... | 4 | ||
| Anchor point | N/A | ST11G029410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G028720 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP4G19400 | 1 | |
| Tree-based ortholog | 1-to-many | TP1G13110 TP4G19400 TP6G21840 | 3 | ||
| Anchor point | N/A | TP6G21840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G19400 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0009G25730 | 1 | |
| Tree-based ortholog | 1-to-many | TC0005G05200 TC0009G25730 | 2 | ||
| Anchor point | N/A | TC0009G25730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G05200 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV08G02450 | 1 | |
| Tree-based ortholog | 1-to-many | VV08G02450 VV06G04820 | 2 | ||
| Anchor point | N/A | VV06G04820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G02450 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM06G03960 | 1 | |
| Tree-based ortholog | 1-to-many | ZM03G27780 ZM06G03960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G03960 | 1 |