Integrative Orthology Viewer: ATR_00006G01730 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00006G01730 ATR_00185G00210 | 2 | |
Tree-based ortholog | ATR_00185G00220 ATR_00024G00460 ATR_00006G01730 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00006G01730 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL8G08730 | 1 | |
Tree-based ortholog | many-to-many | AL4G00390 AL7G00790 AL8G08730 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G00390 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G42520 | 1 | |
Tree-based ortholog | many-to-many | AT2G21240 AT4G38910 AT5G42520 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G42520 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV1G07050 | 1 | |
Tree-based ortholog | many-to-many | BV0G53250 BV1G07050 BV0G27570 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G07050 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR04G01590 BR07G16460 | 2 | |
Tree-based ortholog | many-to-many | BR01G00160 BR08G20190 BR06G39610 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G01590 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_008G06390 | 1 | |
Tree-based ortholog | many-to-many | CRU_004G00290 CRU_008G06390 CRU_001G13820 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G06390 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-many | CP00150G00090 CP00002G01130 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00150G00090 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G14210 | 1 | |
Tree-based ortholog | many-to-many | CL02G04710 CL08G14210 CL01G06600 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G14210 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00002G05200 | 1 | |
Tree-based ortholog | many-to-many | CS00623G00030 CS00002G05200 CS01024G00030 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G05200 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00014G03580 | 1 | |
Tree-based ortholog | many-to-many | CM00019G03170 CM00014G03580 CM00005G01810 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00019G03170 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G08420 | 1 | |
Tree-based ortholog | many-to-many | EG0009G10720 EG0004G08420 EG0007G15560 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G08420 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G38950 | 1 | |
Tree-based ortholog | many-to-many | FV2G17510 FV2G38950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G17510 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G02860 GM06G02880 | 2 | |
Tree-based ortholog | many-to-many | GM08G01240 GM05G38430 GM06G02880 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G02860 GM06G02880 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR02G12490 | 1 | |
Tree-based ortholog | many-to-many | GR01G24370 GR02G12490 GR12G18320 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G12490 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G030220 | 1 | |
Tree-based ortholog | many-to-many | LJ4G045140 LJ1G030220 LJ4G039590 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G030220 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD08G001170 MD12G015010 | 2 | |
Tree-based ortholog | many-to-many | MD00G435520 MD10G008450 MD00G076120 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD08G001170 MD12G015010 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME07917G00030 | 1 | |
Tree-based ortholog | many-to-many | ME01579G00010 ME02994G00070 ME07917G00030 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME02994G00070 ME01579G00010 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G023660 | 1 | |
Tree-based ortholog | many-to-many | MT8G099780 MT1G023660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G023660 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G04010 | 1 | |
Tree-based ortholog | many-to-many | OS06G04010 OS10G02509 OS10G02584 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G04010 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-1 | PP00056G00020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00056G00020 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G02670 PT05G23590 | 2 | |
Tree-based ortholog | many-to-many | PT04G16370 PT09G12530 PT02G02670 ... | 16 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G16370 PT09G12530 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G37770 | 1 | |
Tree-based ortholog | many-to-many | PPE_008G10070 PPE_001G37770 PPE_001G34690 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G37770 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30170G05000 | 1 | |
Tree-based ortholog | many-to-many | RC30131G02900 RC30170G05000 RC29780G00780 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30131G02900 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G081170 | 1 | |
Tree-based ortholog | many-to-many | SL01G110470 SL04G081170 SL02G084230 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G110470 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST04G034550 | 1 | |
Tree-based ortholog | many-to-many | ST01G047920 ST04G034550 ST02G027470 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G047920 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G02970 | 1 | |
Tree-based ortholog | many-to-many | TP4G00440 TP7G36930 TP5G02970 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G02970 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G03750 | 1 | |
Tree-based ortholog | many-to-many | TC0002G07050 TC0008G03750 TC0002G30270 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G07050 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV18G10080 | 1 | |
Tree-based ortholog | many-to-many | VV03G05790 VV01G05300 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G05790 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM09G05720 | 1 | |
Tree-based ortholog | many-to-many | ZM09G05720 ZM01G33520 ZM04G09600 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G05720 | 1 |