Integrative Orthology Viewer: ATR_00003G03560 (Amborella trichopoda)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | ATR_00003G03560 | 1 | |
Tree-based ortholog | ATR_00003G03560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | ATR_00003G03560 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL7G13650 | 1 | |
Tree-based ortholog | 1-to-many | AL3G41810 AL7G13650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G13650 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G28190 | 1 | |
Tree-based ortholog | 1-to-many | AT2G20825 AT4G28190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G28190 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR01G18420 | 1 | |
Tree-based ortholog | 1-to-many | BR07G00060 BR01G18420 BR03G50170 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G18420 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_007G11840 | 1 | |
Tree-based ortholog | 1-to-many | CRU_003G34050 CRU_007G11840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G11840 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00034G01070 | 1 | |
Tree-based ortholog | 1-to-1 | CP00034G01070 | 1 | ||
Anchor point | N/A | CP00034G01070 CP00080G01050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00034G01070 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G00820 | 1 | |
Tree-based ortholog | 1-to-1 | CL02G00820 | 1 | ||
Anchor point | N/A | CL11G12390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G00820 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00181G00070 | 1 | |
Tree-based ortholog | 1-to-1 | CS00181G00070 | 1 | ||
Anchor point | N/A | CS00012G00470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00181G00070 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00034G03890 | 1 | |
Tree-based ortholog | 1-to-1 | CM00034G03890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00034G03890 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G07870 | 1 | |
Tree-based ortholog | 1-to-1 | EG0011G07870 | 1 | ||
Anchor point | N/A | EG0011G07870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G07870 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G40460 | 1 | |
Tree-based ortholog | 1-to-1 | FV6G40460 | 1 | ||
Anchor point | N/A | FV6G40460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G40460 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM06G45180 GM12G11800 | 2 | |
Tree-based ortholog | 1-to-many | GM06G45180 GM12G11800 | 2 | ||
Anchor point | N/A | GM12G11800 GM06G45180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G11800 GM06G45180 | 2 | ||
Gossypium raimondii | Orthologous gene family | 1-to-many | GR05G20480 GR08G15240 | 2 | |
Tree-based ortholog | 1-to-many | GR05G20480 GR08G15240 | 2 | ||
Anchor point | N/A | GR05G20480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G20480 | 1 | ||
Lotus japonicus | Orthologous gene family | 1-to-1 | LJ3G039140 | 1 | |
Tree-based ortholog | 1-to-1 | LJ3G039140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G039140 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD00G119900 MD05G011700 MD17G007060 | 3 | |
Tree-based ortholog | 1-to-many | MD00G430790 MD00G119900 MD05G011700 ... | 4 | ||
Anchor point | N/A | MD03G019160 MD17G007060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G119900 MD05G011700 MD17G007060 | 3 | ||
Manihot esculenta | Orthologous gene family | 1-to-many | ME00253G00020 ME11689G00180 | 2 | |
Tree-based ortholog | 1-to-many | ME11689G00180 ME00253G00020 | 2 | ||
Anchor point | N/A | ME11689G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME11689G00180 ME00253G00020 | 2 | ||
Medicago truncatula | Orthologous gene family | 1-to-many | MT00G18250 MT2G090080 | 2 | |
Tree-based ortholog | 1-to-1 | MT2G090080 | 1 | ||
Anchor point | N/A | MT2G090080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G090080 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G57240 | 1 | |
Tree-based ortholog | 1-to-many | OS01G57240 OS05G42290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G57240 | 1 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT13G14540 PT19G10450 | 2 | |
Tree-based ortholog | 1-to-many | PT13G14540 PT19G10450 | 2 | ||
Anchor point | N/A | PT13G14540 PT11G12750 PT19G10450 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G14540 PT19G10450 | 2 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_003G21240 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_003G21240 | 1 | ||
Anchor point | N/A | PPE_004G18070 PPE_003G21240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G21240 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29983G01500 | 1 | |
Tree-based ortholog | 1-to-1 | RC29983G01500 | 1 | ||
Anchor point | N/A | RC29983G01500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29983G01500 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL07G054450 | 1 | |
Tree-based ortholog | 1-to-many | SL12G010760 SL12G010370 SL07G054450 | 3 | ||
Anchor point | N/A | SL07G054450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G054450 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST07G020040 | 1 | |
Tree-based ortholog | 1-to-many | ST12G007000 ST07G020040 | 2 | ||
Anchor point | N/A | ST07G026850 ST07G020040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G020040 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G26140 | 1 | |
Tree-based ortholog | 1-to-many | TP3G34060 TP7G26140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G26140 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G16850 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G16850 | 1 | ||
Anchor point | N/A | TC0002G16850 TC0007G06830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G16850 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV12G11950 | 1 | |
Tree-based ortholog | 1-to-1 | VV12G11950 | 1 | ||
Anchor point | N/A | VV12G11950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G11950 | 1 | ||
Zea mays | Orthologous gene family | 1-to-1 | ZM03G30180 | 1 | |
Tree-based ortholog | 1-to-many | ZM03G30180 ZM08G33830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G30180 | 1 |