Integrative Orthology Viewer: AT4G02710 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G03080 AT3G22790 AT4G02710 ... | 4 | |
Tree-based ortholog | AT4G02710 | 1 | ||
Anchor point | AT1G03080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT4G02710 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G06300 | 1 | |
Tree-based ortholog | 1-to-many | ATR_00002G06300 ATR_00016G01100 ATR_00057G01320 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G06300 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G02370 AL6G38640 AL7G29320 | 3 | |
Tree-based ortholog | 1-to-1 | AL6G38640 | 1 | ||
Anchor point | 1-to-many | AL1G02370 AL6G38640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G38640 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G53830 | 1 | |
Tree-based ortholog | 1-to-many | BV0G53830 BV0G37960 BV5G12460 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G12460 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G21070 BR01G28610 BR05G20890 ... | 5 | |
Tree-based ortholog | 1-to-1 | BR09G00230 | 1 | ||
Anchor point | 1-to-many | BR09G00230 BR09G53930 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G00230 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G21950 CRU_006G33200 CRU_007G26210 | 3 | |
Tree-based ortholog | 1-to-1 | CRU_006G33200 | 1 | ||
Anchor point | 1-to-many | CRU_001G02060 CRU_006G33200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G33200 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00058G00510 CP01647G00010 | 2 | |
Tree-based ortholog | 1-to-many | CP01647G00020 CP01647G00010 CP00058G00510 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01647G00010 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL05G05440 CL07G02580 CL09G06840 | 3 | |
Tree-based ortholog | 1-to-1 | CL05G05440 | 1 | ||
Anchor point | 1-to-many | CL09G06840 CL07G02580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G06840 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00011G00330 CS00022G00950 | 2 | |
Tree-based ortholog | 1-to-many | CS00011G00330 CS00001G08380 | 2 | ||
Anchor point | 1-to-1 | CS00022G00950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00022G00950 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G06130 CM00022G01050 CM00026G01160 | 3 | |
Tree-based ortholog | 1-to-1 | CM00006G06130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00026G01160 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G12250 EG0008G27730 EG0011G28230 | 3 | |
Tree-based ortholog | 1-to-many | EG0008G12250 EG0011G28230 EG0008G27730 ... | 4 | ||
Anchor point | 1-to-many | EG0011G28230 EG0011G29090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G28230 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G24480 FV4G08070 | 2 | |
Tree-based ortholog | 1-to-many | FV2G24480 FV4G08070 FV0G13840 ... | 4 | ||
Anchor point | 1-to-1 | FV2G24480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G24480 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G44310 GM01G44680 GM02G16380 ... | 18 | |
Tree-based ortholog | 1-to-many | GM13G07341 GM20G16080 GM20G28750 ... | 12 | ||
Anchor point | 1-to-many | GM02G16380 GM19G34130 GM03G31290 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G16380 GM10G14860 GM10G03450 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G07770 GR04G21730 GR06G24160 ... | 5 | |
Tree-based ortholog | 1-to-1 | GR04G21730 | 1 | ||
Anchor point | 1-to-many | GR04G21730 GR04G07770 GR08G00290 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G00290 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G034680 | 1 | |
Tree-based ortholog | 1-to-many | LJ5G034680 LJ1G001280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G034680 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G077960 MD00G437440 MD00G471100 ... | 7 | |
Tree-based ortholog | 1-to-many | MD00G471100 MD11G025450 MD00G496310 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G471100 MD11G025450 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01551G01860 ME04457G02070 ME10563G00190 ... | 5 | |
Tree-based ortholog | 1-to-many | ME10563G00210 ME10563G00220 ME10563G00190 ... | 6 | ||
Anchor point | 1-to-many | ME04457G02070 ME11998G00580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME04457G02070 ME11998G00580 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G071540 MT1G103160 MT5G006520 ... | 4 | |
Tree-based ortholog | 1-to-many | MT1G103160 MT5G006520 MT7G108070 ... | 4 | ||
Anchor point | 1-to-1 | MT7G095410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G071540 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G06510 OS03G43684 OS10G28610 ... | 4 | |
Tree-based ortholog | 1-to-many | OS12G41200 OS03G43684 OS10G28610 ... | 6 | ||
Anchor point | 1-to-1 | OS07G47090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G28610 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00077G00140 | 1 | |
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G15620 PT10G08330 | 2 | |
Tree-based ortholog | 1-to-many | PT05G21340 PT08G15620 PT10G08330 ... | 6 | ||
Anchor point | 1-to-many | PT05G21340 PT02G04960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G21340 PT02G04960 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G01890 PPE_008G25040 | 2 | |
Tree-based ortholog | 1-to-many | PPE_008G25040 PPE_001G01890 PPE_001G22550 ... | 4 | ||
Anchor point | 1-to-many | PPE_008G26500 PPE_008G25040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G25040 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29703G00110 RC29844G00840 | 2 | |
Tree-based ortholog | 1-to-many | RC29844G00840 RC30128G04390 RC29647G00360 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29703G00110 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G065550 SL09G082510 SL10G045290 | 3 | |
Tree-based ortholog | 1-to-many | SL10G045290 SL09G082510 SL09G074470 | 3 | ||
Anchor point | 1-to-1 | SL09G065550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G065550 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST09G020310 ST09G023550 ST10G015270 | 3 | |
Tree-based ortholog | 1-to-many | ST10G015270 ST09G023550 ST09G022670 | 3 | ||
Anchor point | 1-to-1 | ST09G020310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G020310 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G02080 TP3G20490 TP7G12890 | 3 | |
Tree-based ortholog | 1-to-1 | TP1G02080 | 1 | ||
Anchor point | 1-to-1 | TP1G02080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G02080 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G27150 TC0004G23940 | 2 | |
Tree-based ortholog | 1-to-1 | TC0001G27150 | 1 | ||
Anchor point | 1-to-1 | TC0001G27150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G27150 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV05G05290 VV07G02280 | 2 | |
Tree-based ortholog | 1-to-many | VV07G02280 VV05G05290 VV07G03880 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G02280 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G28930 ZM01G44200 ZM01G46870 ... | 6 | |
Tree-based ortholog | 1-to-many | ZM01G28930 ZM01G46870 ZM05G11030 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G11030 | 1 |