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Integrative Orthology Viewer:
AT4G00860
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G01170 AT4G00860 | 2 |  |
| Tree-based ortholog | AT4G00860 | 1 | ||
| Anchor point | AT1G01170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT4G00860 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00109G00870 ATR_00110G00690 | 2 | |
| Tree-based ortholog | 1-to-many | ATR_00110G00690 ATR_00109G00870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00109G00870 ATR_00110G00690 | 2 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G01190 AL6G40770 | 2 | |
| Tree-based ortholog | 1-to-1 | AL6G40770 | 1 | ||
| Anchor point | 1-to-many | AL6G40770 AL1G01190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G40770 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G13910 BV4G13090 | 2 | |
| Tree-based ortholog | 1-to-many | BV0G13910 BV4G13090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G13090 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR09G01160 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G01160 | 1 | ||
| Anchor point | 1-to-many | BR09G01160 BR10G05970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G01160 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G00950 CRU_006G34630 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_006G34630 | 1 | ||
| Anchor point | 1-to-many | CRU_006G34630 CRU_001G00950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G34630 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00009G01900 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00009G01900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G01900 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL03G09560 CL04G00210 | 2 | |
| Tree-based ortholog | 1-to-many | CL03G09560 CL04G00210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL04G00210 CL03G09560 | 2 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00054G00370 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00054G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00054G00370 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM30898G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CM30898G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM30898G00010 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G19840 EG0010G06650 | 2 | |
| Tree-based ortholog | 1-to-many | EG0001G19840 EG0010G06650 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G06650 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV2G48920 FV6G47840 | 2 | |
| Tree-based ortholog | 1-to-many | FV6G47840 FV2G48920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G48920 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G00700 GM08G24930 GM15G31250 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM08G24930 GM15G31250 GM19G30130 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G00700 GM19G30130 GM08G24930 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR02G23060 | 1 | |
| Tree-based ortholog | 1-to-many | GR06G13720 GR02G23060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G23060 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD11G015400 MD15G008720 | 2 | |
| Tree-based ortholog | 1-to-many | MD15G008720 MD11G015400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G008720 MD11G015400 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02242G00070 ME02631G00050 | 2 | |
| Tree-based ortholog | 1-to-many | ME02242G00070 ME02631G00050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME02631G00050 ME02242G00070 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT4G097550 MT7G091770 | 2 | |
| Tree-based ortholog | 1-to-many | MT7G091770 MT4G097550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G091770 MT4G097550 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS06G02420 OS06G02470 OS11G06240 | 3 | |
| Tree-based ortholog | 1-to-many | OS02G39620 OS04G41980 OS11G06240 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS06G02470 OS11G06240 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00392G00190 PP00392G00210 | 2 | |
| Tree-based ortholog | 1-to-many | PP00392G00190 PP00392G00210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00392G00190 PP00392G00210 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT06G05190 | 1 | |
| Tree-based ortholog | 1-to-many | PT06G05190 PT16G05520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G05190 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_007G07680 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_007G07680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G07680 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30078G00800 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30078G00800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30078G00800 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL10G080190 | 1 | |
| Tree-based ortholog | 1-to-1 | SL10G080190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G080190 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST10G021940 | 1 | |
| Tree-based ortholog | 1-to-many | ST10G021940 ST04G012810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G021940 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G01260 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G01260 | 1 | ||
| Anchor point | 1-to-many | TP1G01120 TP6G01260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G01260 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G15940 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G15940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G15940 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV08G07550 | 1 | |
| Tree-based ortholog | 1-to-many | VV08G07550 VV13G11670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G07550 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM06G07020 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM06G07020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G07020 | 1 |