Integrative Orthology Viewer: AT3G54000 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G54000 | 1 | |
Tree-based ortholog | AT3G54000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G54000 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00165G00210 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00165G00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00165G00210 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G24040 | 1 | |
Tree-based ortholog | 1-to-1 | AL5G24040 | 1 | ||
Anchor point | N/A | AL5G24040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G24040 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G17680 | 1 | |
Tree-based ortholog | 1-to-1 | BV6G17680 | 1 | ||
Anchor point | N/A | BV2G06150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G06150 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR04G05010 BR09G35070 | 2 | |
Tree-based ortholog | 1-to-many | BR09G35070 BR04G05010 | 2 | ||
Anchor point | N/A | BR04G05010 BR09G35070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G35070 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G19370 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_005G19370 | 1 | ||
Anchor point | N/A | CRU_005G19370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G19370 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00056G00530 | 1 | |
Tree-based ortholog | 1-to-1 | CP00056G00530 | 1 | ||
Anchor point | N/A | CP00056G00530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00056G00530 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL04G07490 | 1 | |
Tree-based ortholog | 1-to-many | CL10G19540 CL10G19550 CL04G07490 | 3 | ||
Anchor point | N/A | CL10G19540 CL04G07490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G07490 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00083G00300 | 1 | |
Tree-based ortholog | 1-to-1 | CS00083G00300 | 1 | ||
Anchor point | N/A | CS00083G00300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00083G00300 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00002G01420 | 1 | |
Tree-based ortholog | 1-to-many | CM00011G01330 CM00011G01320 CM00002G01420 | 3 | ||
Anchor point | N/A | CM00002G01420 CM00008G02060 CM00011G01320 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G01330 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0002G22310 EG0011G25440 | 2 | |
Tree-based ortholog | 1-to-many | EG0002G22310 EG0011G25440 | 2 | ||
Anchor point | N/A | EG0002G22310 EG0011G25440 EG0010G17290 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G22310 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G11880 | 1 | |
Tree-based ortholog | 1-to-1 | FV6G11880 | 1 | ||
Anchor point | N/A | FV7G28490 FV6G11880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G11880 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM07G16970 GM18G41490 | 2 | |
Tree-based ortholog | 1-to-many | GM03G27551 GM18G41490 GM07G16970 ... | 5 | ||
Anchor point | N/A | GM18G03580 GM18G41490 GM15G03966 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G41490 GM07G16970 | 2 | ||
Gossypium raimondii | Orthologous gene family | 1-to-many | GR06G17880 GR12G10900 | 2 | |
Tree-based ortholog | 1-to-many | GR12G10900 GR07G37750 GR06G17880 | 3 | ||
Anchor point | N/A | GR12G10900 GR07G37750 GR11G27460 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G10900 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G004210 LJ3G045530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G045530 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-1 | MD04G011120 | 1 | |
Tree-based ortholog | 1-to-1 | MD04G011120 | 1 | ||
Anchor point | N/A | MD04G011120 MD01G013070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD04G011120 | 1 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME03651G00410 | 1 | |
Tree-based ortholog | 1-to-1 | ME03651G00410 | 1 | ||
Anchor point | N/A | ME03651G00410 ME08265G02690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03651G00410 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-1 | MT00G30430 | 1 | |
Tree-based ortholog | 1-to-many | MT4G019840 MT00G30430 | 2 | ||
Anchor point | N/A | MT3G069670 MT4G019840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT00G30430 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS05G37930 OS01G63050 | 2 | |
Anchor point | N/A | OS01G63050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G63050 | 1 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G09300 PT16G10500 | 2 | |
Tree-based ortholog | 1-to-many | PT06G09300 PT16G10500 | 2 | ||
Anchor point | N/A | PT10G19580 PT08G06220 PT06G09300 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G09300 PT16G10500 | 2 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G27250 | 1 | |
Tree-based ortholog | 1-to-many | PPE_004G25780 PPE_006G27250 | 2 | ||
Anchor point | N/A | PPE_006G27250 PPE_002G23380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G27250 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC28006G00010 | 1 | |
Tree-based ortholog | 1-to-1 | RC28006G00010 | 1 | ||
Anchor point | N/A | RC29751G00460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28006G00010 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL09G011690 | 1 | |
Tree-based ortholog | 1-to-many | SL10G084970 SL09G011690 | 2 | ||
Anchor point | N/A | SL06G076490 SL10G084970 SL09G011690 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G011690 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST05G014770 | 1 | |
Tree-based ortholog | 1-to-many | ST10G023850 ST05G014770 ST10G027860 | 3 | ||
Anchor point | N/A | ST06G032290 ST10G027860 ST10G023850 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G014770 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G08400 | 1 | |
Tree-based ortholog | 1-to-1 | TP5G08400 | 1 | ||
Anchor point | N/A | TP5G08400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08400 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G02680 | 1 | |
Tree-based ortholog | 1-to-1 | TC0005G02680 | 1 | ||
Anchor point | N/A | TC0005G02680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G02680 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV08G13660 | 1 | |
Tree-based ortholog | 1-to-1 | VV08G13660 | 1 | ||
Anchor point | N/A | VV13G04360 VV08G13660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G13660 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM08G14320 ZM06G25510 ZM03G26870 ... | 4 | |
Anchor point | N/A | ZM06G25510 ZM03G26870 ZM08G31800 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G26870 ZM08G31800 | 2 |