Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G23140
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G23140 | 1 |  |
| Tree-based ortholog | AT3G23140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G23140 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00012G03040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00012G03040 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL5G23870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G25690 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G13450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G04730 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR03G37490 | 1 | |
| Tree-based ortholog | 1-to-1 | BR03G37490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G37490 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G22370 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G22370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G22370 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00044G00940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00044G00940 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL05G04950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G04950 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00566G00050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00566G00050 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00105G00270 CM00006G05540 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00105G00270 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0008G01700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G12530 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV1G24590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G24590 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM20G34840 GM10G32810 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G34840 GM10G32810 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR11G17200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G17200 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ5G021540 LJ6G000580 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G000580 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD05G019210 MD13G022670 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD05G019210 MD13G022670 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME10563G00890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10563G00890 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT1G044225 MT1G075430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G044225 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS05G14130 OS03G05490 OS02G57550 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G14130 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00186G00010 PP00002G02380 PP00011G00570 ... | 7 | |
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT10G07440 PT08G16410 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G22150 PT02G04160 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G03300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G03300 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29603G00270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29603G00270 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL09G089600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G089600 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST09G026400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G026400 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G20790 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G20790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G20790 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0004G25170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G25170 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV06G03050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G03050 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM08G16760 ZM05G44440 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G07070 ZM02G19790 | 2 |