Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT3G16720
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G16720 | 1 |  |
| Anchor point | AT4G15975 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT3G16720 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00003G02490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00129G00380 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G17930 | 1 | |
| Anchor point | 1-to-many | AL3G17930 AL7G27540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G17930 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G43000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G43000 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR03G34840 BR05G26660 | 2 | |
| Anchor point | 1-to-many | BR05G26660 BR07G17480 BR01G32460 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G34840 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G15670 | 1 | |
| Anchor point | 1-to-many | CRU_003G15670 CRU_007G24510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G15670 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00050G01640 | 1 | |
| Anchor point | 1-to-1 | CP00050G01640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00050G01640 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL05G07020 | 1 | |
| Anchor point | 1-to-many | CL06G04760 CL05G07020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G07020 | 1 | ||
| Citrus sinensis | Anchor point | 1-to-many | CS00016G00540 CS00001G07330 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00136G00180 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00006G07880 | 1 | |
| Anchor point | 1-to-many | CM00006G07880 CM00047G01850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G07880 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G31870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G31870 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV4G13740 | 1 | |
| Anchor point | 1-to-1 | FV4G13740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G13740 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM09G04750 | 1 | |
| Anchor point | 1-to-many | GM07G37470 GM09G04750 GM17G03155 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM09G04750 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G02870 GR06G26110 | 2 | |
| Anchor point | 1-to-many | GR06G26110 GR02G02870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G26110 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ2G001740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G001740 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G262340 MD13G015090 | 2 | |
| Anchor point | 1-to-1 | MD13G015090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G015090 MD00G262340 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME01551G03770 ME01945G00650 | 2 | |
| Anchor point | 1-to-many | ME01945G00650 ME04457G00530 ME01551G03770 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME01945G00650 ME01551G03770 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G436100 | 1 | |
| Anchor point | 1-to-many | MT2G436100 MT4G120270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G436100 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS03G22080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G09310 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00038G00250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00038G00250 PP00133G00330 PP00006G01120 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT00G13910 PT08G21920 PT10G01050 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G01050 PT08G21920 PT00G13910 | 3 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G11630 | 1 | |
| Anchor point | 1-to-1 | PPE_001G11630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G11630 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29726G01890 | 1 | |
| Anchor point | 1-to-many | RC29726G01890 RC29986G00570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29726G01890 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G066430 | 1 | |
| Anchor point | 1-to-1 | SL09G075320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G066430 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G020540 | 1 | |
| Anchor point | 1-to-many | ST01G020540 ST09G022880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G020540 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G14990 | 1 | |
| Anchor point | 1-to-many | TP3G14990 TP7G14470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G14990 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0004G28990 | 1 | |
| Anchor point | 1-to-many | TC0001G30170 TC0004G28990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G28990 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV07G08580 | 1 | |
| Anchor point | 1-to-1 | VV07G08580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G08580 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G15370 ZM09G02420 | 2 | |