Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G13050
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G13050 | 1 |  |
| Tree-based ortholog | AT1G13050 | 1 | ||
| Anchor point | AT3G26350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G13050 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00061G01420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00061G01420 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G13640 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G13640 | 1 | ||
| Anchor point | 1-to-many | AL1G13640 AL7G30790 AL5G04970 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G13640 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV2G05260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G05260 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR06G08090 | 1 | |
| Tree-based ortholog | 1-to-1 | BR06G08090 | 1 | ||
| Anchor point | 1-to-many | BR06G08090 BR02G33300 BR06G33640 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G08090 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G12190 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G12190 | 1 | ||
| Anchor point | 1-to-many | CRU_005G03910 CRU_001G12190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G12190 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00033G00480 | 1 | |
| Anchor point | 1-to-1 | CP00033G00480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00033G00480 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL05G26820 | 1 | |
| Anchor point | 1-to-1 | CL05G26820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G26820 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00003G01650 | 1 | |
| Anchor point | 1-to-1 | CS00003G01650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G01650 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00016G02520 | 1 | |
| Anchor point | 1-to-1 | CM00016G02520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G02520 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0008G19840 | 1 | |
| Anchor point | 1-to-1 | EG0008G19840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G19840 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV0G11000 | 1 | |
| Anchor point | 1-to-1 | FV0G11000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G11000 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM08G13920 GM05G30720 | 2 | |
| Anchor point | 1-to-1 | GM08G13920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G30720 GM08G13920 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR12G17340 GR05G17620 | 2 | |
| Anchor point | 1-to-many | GR12G17340 GR05G17620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G17620 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G049170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G049170 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD16G006040 MD13G007720 | 2 | |
| Anchor point | 1-to-many | MD13G007720 MD16G006040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G007720 MD16G006040 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME12211G00480 ME12211G00540 ME04175G00440 | 3 | |
| Anchor point | 1-to-many | ME12211G00480 ME04175G00440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME12211G00480 ME04175G00440 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT8G089695 | 1 | |
| Anchor point | 1-to-1 | MT8G089695 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G089695 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS01G68090 OS01G68080 | 2 | |
| Anchor point | 1-to-1 | OS01G68080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G68090 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00134G00370 PP00152G00730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00134G00370 PP00427G00110 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT08G18450 PT08G18410 PT10G04900 | 3 | |
| Anchor point | 1-to-many | PT10G04900 PT08G18410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G04900 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G25300 | 1 | |
| Anchor point | 1-to-1 | PPE_001G25300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G25300 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29792G00290 | 1 | |
| Anchor point | 1-to-1 | RC29792G00290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29792G00290 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL05G013760 | 1 | |
| Anchor point | 1-to-1 | SL05G013760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G013760 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST05G014690 | 1 | |
| Anchor point | 1-to-1 | ST05G014690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G014690 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G11600 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G11600 | 1 | ||
| Anchor point | 1-to-many | TP1G11600 TP2G15500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G11600 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0002G26420 | 1 | |
| Anchor point | 1-to-1 | TC0002G26420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G26420 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV19G06710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G06710 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM03G23520 ZM08G29570 | 2 | |
| Anchor point | 1-to-1 | ZM03G23520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G31330 | 1 |