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Integrative Orthology Viewer:
AL1G17780
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G17780 | 1 |  |
| Tree-based ortholog | AL1G17780 | 1 | ||
| Anchor point | AL2G27860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL1G17780 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00008G00100 ATR_00002G06110 | 2 | |
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G16905 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G16905 | 1 | ||
| Anchor point | 1-to-many | AT1G78820 AT1G16905 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G16905 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV4G15700 | 1 | |
| Anchor point | 1-to-1 | BV4G15700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G15700 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR07G18770 BR07G33490 BR07G33520 ... | 5 | |
| Anchor point | 1-to-many | BR07G33490 BR07G18760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G49960 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_002G24260 CRU_002G24250 CRU_002G24280 | 3 | |
| Anchor point | 1-to-1 | CRU_002G24250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G24280 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00077G00010 CP00097G01060 CP00097G01040 ... | 5 | |
| Anchor point | 1-to-1 | CP00077G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00097G01060 CP00097G01050 CP00097G01030 | 3 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL11G11520 CL07G14950 | 2 | |
| Anchor point | 1-to-many | CL07G14950 CL11G11520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G14950 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00421G00030 CS01628G00010 CS00421G00020 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS01759G00010 CS00322G00200 CS05068G00010 | 3 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00027G00770 | 1 | |
| Anchor point | 1-to-1 | CM00027G00770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00027G00770 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0006G10070 EG0006G10050 EG0006G10060 ... | 5 | |
| Anchor point | 1-to-1 | EG0006G10030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0006G10030 EG0006G10060 EG0006G10070 ... | 4 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV3G18630 FV3G18620 FV3G18610 ... | 6 | |
| Anchor point | 1-to-1 | FV3G18570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G18610 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM13G34540 GM13G34520 | 2 | |
| Anchor point | 1-to-1 | GM13G34520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM13G34520 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR02G06110 GR11G03990 GR11G03980 ... | 5 | |
| Anchor point | 1-to-1 | GR13G17360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G06130 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G066250 | 1 | |
| Malus domestica | Tree-based ortholog | 1-to-many | MD11G023760 MD03G021070 MD03G021060 ... | 12 | |
| Anchor point | 1-to-many | MD11G023710 MD03G021050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD11G023710 MD11G023740 MD11G023790 ... | 5 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME03741G00350 ME03741G00340 ME03741G00330 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03741G00330 ME03741G00300 ME03741G00350 | 3 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT2G076590 MT2G076490 MT2G076650 ... | 4 | |
| Anchor point | 1-to-1 | MT2G076490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT2G076490 MT2G076590 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G72810 | 1 | |
| Tree-based ortholog | 1-to-1 | OS01G72810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G72810 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00035G02010 PP00035G02000 PP00167G00400 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00035G02000 PP00035G02010 PP00167G00400 ... | 4 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT11G06620 PT10G00890 PT10G00590 ... | 10 | |
| Anchor point | 1-to-1 | PT11G11000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT11G11020 PT01G39130 PT11G11050 ... | 4 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_004G15780 PPE_004G15790 PPE_004G15800 ... | 7 | |
| Anchor point | 1-to-1 | PPE_004G15780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G15840 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC29681G00510 RC29681G00520 RC28108G00060 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC29681G00510 RC29681G00520 | 2 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL02G076830 SL07G062490 SL07G062480 | 3 | |
| Anchor point | 1-to-1 | SL07G062480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G076830 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST02G019410 ST07G024850 ST07G024860 | 3 | |
| Anchor point | 1-to-1 | ST07G024850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G019410 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP5G33860 TP7G12390 TP5G33870 | 3 | |
| Anchor point | 1-to-1 | TP5G33860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G33870 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0007G10230 TC0006G16710 TC0007G10220 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G10220 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV19G01860 | 1 | |
| Anchor point | 1-to-many | VV19G01860 VV12G03530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G01860 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G26430 | 1 | |