Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G11530	Arabidopsis thaliana	HOM04x5M012248	ORTHO04x5M016778	0.0e+00	2157.5	1097	100.0
Potri.006G240500	Populus trichocarpa	HOM04x5M012248	ORTHO04x5M016778	7.0e-70	268.9	1293	27.6
Potri.018G039500	Populus trichocarpa	HOM04x5M012248	ORTHO04x5M016778	8.6e-60	235.3	1302	26.2
GSVIVG01035651001	Vitis vinifera	HOM04x5M012248	ORTHO04x5M016778	5.6e-43	179.5	947	26.6
Solyc11g071250.1	Solanum lycopersicum	HOM04x5M012248	ORTHO04x5M016778	1.8e-17	94.7	1244	21.4
PAB00032423	Picea abies	HOM04x5M012855	ORTHO04x5M011672	3.7e-10	70.5	69	39.1
PAB00017780	Picea abies	HOM04x5M012855	ORTHO04x5M011672	4.8e-10	70.1	98	34.7
p5.00_sc00116_p0081	Elaeis guineensis	HOM04x5M009702	ORTHO04x5M011672	1.1e-09	68.9	89	36.0
p5.00_sc00116_p0082	Elaeis guineensis	HOM04x5M009702	ORTHO04x5M011672	1.4e-09	68.6	144	27.8
Ma03_g16430	Musa acuminata	HOM04x5M009702	ORTHO04x5M011672	1.5e-08	65.1	210	26.7
PAB00044739	Picea abies	HOM04x5M022000	ORTHO04x5M021872	2.6e-08	64.3	154	30.5
Zosma317g00170	Zostera marina	HOM04x5M012248	ORTHO04x5M011672	3.4e-08	63.9	92	33.7
CALSI_Maker00030828	Calamus simplicifolius	HOM04x5M009702	ORTHO04x5M011672	5.8e-08	63.2	75	40.0
Zosma9g00080	Zostera marina	HOM04x5M012248	ORTHO04x5M011672	5.8e-08	63.2	60	38.3
ASH_gene12301	Apostasia shenzhenica	HOM04x5M009702	ORTHO04x5M011672	1.7e-07	61.6	63	41.3
ATR0315G010	Amborella trichopoda	HOM04x5M012248	ORTHO04x5M011672	1.7e-07	61.6	67	40.3
Ma02_g11070	Musa acuminata	HOM04x5M009702	ORTHO04x5M011672	1.7e-07	61.6	62	41.9
PAB00010171	Picea abies	HOM04x5M012855	ORTHO04x5M011672	1.7e-07	61.6	749	21.8
PAB00006875	Picea abies	HOM04x5M026399	ORTHO04x5M011672	2.9e-07	60.8	60	40.0
PAB00030739	Picea abies	HOM04x5M022000	ORTHO04x5M021872	1.4e-06	58.5	66	43.9
PEQU_19716	Phalaenopsis equestris	HOM04x5M009702	ORTHO04x5M006388	1.9e-06	58.2	54	42.6
Ma08_g27990	Musa acuminata	HOM04x5M009702	ORTHO04x5M006388	3.2e-06	57.4	197	26.9

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment