Interactive Phylogenetics Module

Gene Id
PGSC0003DMG400012204

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012204 Solanum tuberosum HOM04D001990 ORTHO04D002104 0.0e+00 1564.3 817 100.0
Solyc08g081160.2 Solanum lycopersicum HOM04D001990 ORTHO04D002104 0.0e+00 1441.4 814 90.9
Peaxi162Scf00119g00948 Petunia axillaris HOM04D001990 ORTHO04D002104 0.0e+00 1144.8 828 73.7
Cc08_g14810 Coffea canephora HOM04D001990 ORTHO04D002104 1.4e-85 320.9 912 30.6
FVE32499 Fragaria vesca HOM04D001990 ORTHO04D002104 1.9e-58 230.7 850 27.9
Pbr005090.1.g Pyrus bretschneideri HOM04D001990 ORTHO04D002104 3.7e-54 216.5 918 26.1
Pbr005091.1.g Pyrus bretschneideri HOM04D001990 ORTHO04D002104 3.7e-54 216.5 918 26.1
Potri.014G084600 Populus trichocarpa HOM04D001990 ORTHO04D002104 1.7e-51 207.6 936 25.0
Migut.A00735 Erythranthe guttata HOM04D001990 ORTHO04D002104 3.9e-51 206.5 544 31.8
GSVIVG01026934001 Vitis vinifera HOM04D001990 ORTHO04D002104 1.8e-48 197.6 901 26.1
Pbr041339.1.g Pyrus bretschneideri HOM04D001990 ORTHO04D002104 4.0e-48 196.4 929 24.8
Cpa.g.sc74.55 Carica papaya HOM04D001990 ORTHO04D002104 4.0e-48 196.4 952 24.8
NNU_16309 Nelumbo nucifera HOM04D001990 ORTHO04D002104 4.0e-48 196.4 976 26.1
HBR2687G010 Hevea brasiliensis HOM04D001990 ORTHO04D002104 5.2e-48 196.1 865 25.9
Manes.01G059400 Manihot esculenta HOM04D001990 ORTHO04D002104 6.8e-48 195.7 879 24.0
TCA.TCM_016267 Theobroma cacao HOM04D001990 ORTHO04D002104 8.9e-48 195.3 933 25.3
ZJU.LOC107433043 Ziziphus jujuba HOM04D001990 ORTHO04D002104 1.5e-47 194.5 947 25.6
Potri.002G160000 Populus trichocarpa HOM04D001990 ORTHO04D002104 3.4e-47 193.4 934 24.9
Ciclev10018716m.g Citrus clementina HOM04D001990 ORTHO04D002104 1.3e-46 191.4 951 25.1
ZJU.LOC107429856 Ziziphus jujuba HOM04D001990 ORTHO04D002104 4.9e-46 189.5 940 23.9
Achn195941 Actinidia chinensis HOM04D001990 ORTHO04D002104 8.4e-46 188.7 936 25.4
HBR3485G024 Hevea brasiliensis HOM04D001990 ORTHO04D002104 1.4e-45 188.0 946 24.0
Prupe.2G170700 Prunus persica HOM04D001990 ORTHO04D002104 1.4e-45 188.0 951 24.6
Manes.01G256600 Manihot esculenta HOM04D001990 ORTHO04D002104 1.4e-45 188.0 954 24.9
Pbr004755.1.g Pyrus bretschneideri HOM04D001990 ORTHO04D002104 4.6e-44 183.0 930 24.1
Pbr018174.1.g Pyrus bretschneideri HOM04D001990 ORTHO04D002104 4.6e-44 183.0 930 24.1
Pbr009173.1.g Pyrus bretschneideri HOM04D001990 ORTHO04D002104 1.0e-43 181.8 944 24.8
NNU_08673 Nelumbo nucifera HOM04D001990 ORTHO04D002104 5.1e-43 179.5 1057 24.5
RCO.g.30190.000461 Ricinus communis HOM04D001990 ORTHO04D002104 1.1e-42 178.3 904 25.2
Manes.02G019700 Manihot esculenta HOM04D001990 ORTHO04D002104 7.3e-42 175.6 912 24.5
HBR0441G034 Hevea brasiliensis HOM04D001990 ORTHO04D002104 3.6e-41 173.3 914 24.2
HBR0388G001 Hevea brasiliensis HOM04D001990 ORTHO04D002104 4.8e-41 172.9 946 23.7
HBR2168G027 Hevea brasiliensis HOM04D001990 ORTHO04D002104 4.8e-41 172.9 914 24.2
Gorai.006G223200 Gossypium raimondii HOM04D001990 ORTHO04D002104 1.1e-40 171.8 910 24.3
Ciclev10018878m.g Citrus clementina HOM04D001990 ORTHO04D002104 1.1e-40 171.8 842 27.2
Gorai.008G247100 Gossypium raimondii HOM04D001990 ORTHO04D002104 1.4e-40 171.4 943 24.2
Prupe.5G101000 Prunus persica HOM04D001990 ORTHO04D002104 2.4e-40 170.6 977 23.5
Pbr031292.1.g Pyrus bretschneideri HOM04D001990 ORTHO04D002104 2.4e-40 170.6 951 23.8
TCA.TCM_020277 Theobroma cacao HOM04D001990 ORTHO04D002104 5.3e-40 169.5 940 23.7
COL.COLO4_20185 Corchorus olitorius HOM04D001990 ORTHO04D002104 1.2e-39 168.3 958 23.7
TPR.G37805 Trifolium pratense HOM04D001990 ORTHO04D002104 2.6e-39 167.2 950 24.2
Solyc01g094640.2 Solanum lycopersicum HOM04D001990 ORTHO04D002104 3.4e-39 166.8 952 24.1
Manes.05G034100 Manihot esculenta HOM04D001990 ORTHO04D002104 9.9e-39 165.2 947 23.2
Achn071951 Actinidia chinensis HOM04D001990 ORTHO04D002104 3.8e-38 163.3 866 23.9
PGSC0003DMG400000172 Solanum tuberosum HOM04D001990 ORTHO04D002104 3.8e-38 163.3 953 23.8
Gorai.005G129500 Gossypium raimondii HOM04D001990 ORTHO04D002104 6.4e-38 162.5 938 23.9
Ca_06204.g Cicer arietinum HOM04D001990 ORTHO04D002104 1.6e-36 157.9 943 24.9
Peaxi162Scf00020g00328 Petunia axillaris HOM04D001990 ORTHO04D002104 1.0e-35 155.2 962 24.3
Cc02_g38040 Coffea canephora HOM04D001990 ORTHO04D002104 1.7e-35 154.5 943 24.3
COL.COLO4_34473 Corchorus olitorius HOM04D001990 ORTHO04D002104 3.9e-35 153.3 846 25.1
Eucgr.D02291 Eucalyptus grandis HOM04D001990 ORTHO04D002104 3.9e-35 153.3 953 23.1
DCAR_006930 Daucus carota HOM04D001990 ORTHO04D002104 2.5e-34 150.6 872 24.8
Cucsa.258370 Cucumis sativus L. HOM04D001990 ORTHO04D002104 2.5e-34 150.6 964 23.8
Potri.001G103400 Populus trichocarpa HOM04D001990 ORTHO04D002104 2.5e-34 150.6 929 25.1
MELO3C006109 Cucumis melo HOM04D001990 ORTHO04D002104 5.6e-34 149.4 966 23.0
Araip.VQ371 Arachis ipaensis HOM04D001990 ORTHO04D002104 9.6e-34 148.7 928 24.6
C.cajan_18266.g Cajanus cajan HOM04D001990 ORTHO04D002104 1.6e-33 147.9 937 23.9
Medtr8g030750 Medicago truncatula HOM04D001990 ORTHO04D002104 2.8e-33 147.1 887 23.1
Achn302571 Actinidia chinensis HOM04D001990 ORTHO04D002104 3.6e-33 146.7 902 23.1
THA.LOC104825840 Tarenaya hassleriana HOM04D001990 ORTHO04D002104 1.8e-32 144.4 897 23.2
TPR.G10305 Trifolium pratense HOM04D001990 ORTHO04D002104 3.1e-32 143.7 902 23.6
Medtr7g077740 Medicago truncatula HOM04D001990 ORTHO04D002104 4.0e-32 143.3 966 24.3
Gorai.005G030500 Gossypium raimondii HOM04D001990 ORTHO04D002104 1.2e-31 141.7 940 22.6
Glyma.09G259200 Glycine max HOM04D001990 ORTHO04D002104 1.2e-31 141.7 955 23.5
Glyma.18G233100 Glycine max HOM04D001990 ORTHO04D002104 2.6e-31 140.6 950 23.8
C.cajan_20729.g Cajanus cajan HOM04D001990 ORTHO04D002104 1.7e-30 137.9 944 22.8
RCO.g.30174.000003 Ricinus communis HOM04D001990 ORTHO04D002104 2.9e-30 137.1 715 24.3
Bv1_004640_ejnz Beta vulgaris HOM04D001990 ORTHO04D002104 1.1e-29 135.2 917 24.4
AUR62022567 Chenopodium quinoa HOM04D001990 ORTHO04D002104 1.9e-29 134.4 931 24.9
Cla021236.g Citrullus lanatus HOM04D001990 ORTHO04D002104 3.2e-29 133.7 962 23.3
AUR62004359 Chenopodium quinoa HOM04D001990 ORTHO04D002104 7.1e-29 132.5 922 23.1
Cpa.g.sc11.5 Carica papaya HOM04D001990 ORTHO04D002104 7.1e-29 132.5 592 27.2
MDO.mRNA.g.766.2 Malus domestica HOM04D001990 ORTHO04D002104 1.6e-28 131.3 237 35.0
THA.LOC104801437 Tarenaya hassleriana HOM04D001990 ORTHO04D002104 2.7e-28 130.6 932 23.1
GSVIVG01019747001 Vitis vinifera HOM04D001990 ORTHO04D002104 4.6e-28 129.8 784 25.0
Achn336431 Actinidia chinensis HOM04D001990 ORTHO04D002104 6.0e-28 129.4 874 23.3
Araip.63F23 Arachis ipaensis HOM04D001990 ORTHO04D002104 7.9e-28 129.0 952 22.3
Vradi09g04490 Vigna radiata var. radiata HOM04D001990 ORTHO04D002104 1.0e-27 128.6 926 23.4
Tp6g00480 Schrenkiella parvula HOM04D001990 ORTHO04D002104 1.5e-26 124.8 918 23.1
MDO.mRNA.g.766.1 Malus domestica HOM04D001990 ORTHO04D002104 2.5e-26 124.0 569 25.8
Glyma.08G015100 Glycine max HOM04D001990 ORTHO04D002104 7.4e-26 122.5 684 25.1
Glyma.03G009000 Glycine max HOM04D001990 ORTHO04D002104 2.8e-25 120.6 953 24.2
ATR0680G229 Amborella trichopoda HOM04D001990 ORTHO04D002104 2.8e-25 120.6 787 23.8
Eucgr.E00135 Eucalyptus grandis HOM04D001990 ORTHO04D002104 6.2e-25 119.4 897 22.9
Migut.B01756 Erythranthe guttata HOM04D001990 ORTHO04D002104 6.2e-25 119.4 904 24.1
DCAR_004631 Daucus carota HOM04D001990 ORTHO04D002104 8.1e-25 119.0 623 25.2
Glyma.05G208500 Glycine max HOM04D001990 ORTHO04D002104 1.4e-24 118.2 708 24.7
AL4G45110 Arabidopsis lyrata HOM04D001990 ORTHO04D002104 1.4e-24 118.2 211 37.4
DCAR_015992 Daucus carota HOM04D001990 ORTHO04D002104 3.1e-24 117.1 938 22.7
Vradi04g06750 Vigna radiata var. radiata HOM04D001990 ORTHO04D002104 4.0e-24 116.7 940 22.8
Carubv10022705m.g Capsella rubella HOM04D001990 ORTHO04D002104 5.3e-24 116.3 213 37.6
Manes.06G173100 Manihot esculenta HOM04D001990 ORTHO04D002104 2.6e-23 114.0 250 29.2
Glyma.07G070500 Glycine max HOM04D001990 ORTHO04D002104 3.4e-23 113.6 938 23.9
AT4G00440 Arabidopsis thaliana HOM04D001990 ORTHO04D002104 4.5e-23 113.2 868 22.5
Tp4g27970 Schrenkiella parvula HOM04D001990 ORTHO04D002104 1.7e-22 111.3 227 37.4
Cucsa.303220 Cucumis sativus L. HOM04D001990 ORTHO04D002104 1.7e-22 111.3 787 22.5
Bo4g195900 Brassica oleracea HOM04D001990 ORTHO04D002104 2.2e-22 110.9 367 30.5
C.cajan_11548.g Cajanus cajan HOM04D001990 ORTHO04D002104 4.9e-22 109.8 673 24.5
AT2G45900 Arabidopsis thaliana HOM04D001990 ORTHO04D002104 4.9e-22 109.8 534 27.5
AL6G53020 Arabidopsis lyrata HOM04D001990 ORTHO04D002104 8.4e-22 109.0 850 22.2
Vradi07g30630 Vigna radiata var. radiata HOM04D001990 ORTHO04D002104 2.5e-21 107.5 638 24.1
THA.LOC104802034 Tarenaya hassleriana HOM04D001990 ORTHO04D002104 4.2e-21 106.7 241 32.4
UGI.Scf00049.5074 Utricularia gibba HOM04D001990 ORTHO04D002104 4.2e-21 106.7 489 26.4
Carubv10000225m.g Capsella rubella HOM04D001990 ORTHO04D002104 2.1e-20 104.4 898 21.5
Gorai.004G212500 Gossypium raimondii HOM04D001990 ORTHO04D012271 2.7e-20 104.0 626 24.3
Araip.U8DBU Arachis ipaensis HOM04D001990 ORTHO04D002104 3.5e-20 103.6 673 24.5
Tp5g02020 Schrenkiella parvula HOM04D001990 ORTHO04D002104 3.5e-20 103.6 262 30.5
AH009687 Amaranthus hypochondriacus HOM04D001990 ORTHO04D002104 1.0e-19 102.1 903 21.7
Brara.K01855 Brassica rapa HOM04D001990 ORTHO04D002104 2.3e-19 100.9 859 22.2
MELO3C005681 Cucumis melo HOM04D001990 ORTHO04D002104 2.3e-19 100.9 717 22.6
Brara.D00108 Brassica rapa HOM04D001990 ORTHO04D002104 1.1e-18 98.6 270 29.3
MDO.mRNA.g.1706.4 Malus domestica HOM04D001990 ORTHO04D002104 1.5e-18 98.2 689 23.2
AL5G43660 Arabidopsis lyrata HOM04D001990 ORTHO04D002104 1.9e-18 97.8 209 31.1
Cla011440.g Citrullus lanatus HOM04D001990 ORTHO04D002104 3.3e-18 97.1 768 21.5
Bo8g095900 Brassica oleracea HOM04D001990 ORTHO04D002104 9.6e-18 95.5 212 30.7
Cpa.g.sc11.4 Carica papaya HOM04D001990 ORTHO04D002104 1.6e-17 94.7 183 30.1
Bo3g054760 Brassica oleracea HOM04D001990 ORTHO04D002104 2.1e-17 94.4 832 23.2
MDO.mRNA.g.1985.2 Malus domestica HOM04D001990 ORTHO04D002104 3.7e-17 93.6 243 28.0
Carubv10016737m.g Capsella rubella HOM04D001990 ORTHO04D002104 3.7e-17 93.6 209 30.1
Bo9g002330 Brassica oleracea HOM04D001990 ORTHO04D002104 2.4e-16 90.9 885 21.5
Bo4g025070 Brassica oleracea HOM04D001990 ORTHO04D002104 3.1e-16 90.5 508 26.6
DCAR_000349 Daucus carota HOM04D001990 ORTHO04D002104 3.1e-16 90.5 415 25.3
DCAR_008398 Daucus carota HOM04D001990 ORTHO04D002104 3.1e-16 90.5 415 25.3
Bo4g101410 Brassica oleracea HOM04D001990 ORTHO04D002104 3.1e-16 90.5 216 31.5
AT3G61380 Arabidopsis thaliana HOM04D001990 ORTHO04D002104 4.1e-16 90.1 246 29.7
Brara.I04229 Brassica rapa HOM04D001990 ORTHO04D002104 5.3e-16 89.7 364 26.4
UGI.Scf00062.5943 Utricularia gibba HOM04D001990 ORTHO04D002104 2.0e-15 87.8 690 22.3
Brara.C02910 Brassica rapa HOM04D001990 ORTHO04D002104 2.6e-15 87.4 847 21.0
UGI.Scf00051.5228 Utricularia gibba HOM04D001990 ORTHO04D002104 7.6e-15 85.9 912 21.4
AL1G10670 Arabidopsis lyrata HOM04D001990 ORTHO04D002104 7.6e-15 85.9 208 29.8
Eucgr.E00627 Eucalyptus grandis HOM04D001990 ORTHO04D002104 1.7e-14 84.7 676 23.2
NNU_12271 Nelumbo nucifera HOM04D002642 ORTHO04D002780 6.5e-14 82.8 715 23.6
UGI.Scf00132.9254 Utricularia gibba HOM04D001990 ORTHO04D002104 7.2e-13 79.3 311 24.1
Ca_13752.g Cicer arietinum HOM04D001990 ORTHO04D002104 9.3e-13 79.0 545 24.4
Zm00001d002695 Zea mays HOM04D001990 ORTHO04D002104 1.2e-12 78.6 919 22.0
LOC_Os03g01580 Oryza sativa ssp. japonica HOM04D001990 ORTHO04D002104 1.6e-12 78.2 913 20.2
UGI.Scf00086.7223 Utricularia gibba HOM04D001990 ORTHO04D002104 1.6e-12 78.2 753 23.0
Brara.I01247 Brassica rapa HOM04D010040 ORTHO04D012271 1.6e-12 78.2 755 22.0
AT1G01695 Arabidopsis thaliana HOM04D001990 ORTHO04D002104 3.5e-12 77.0 383 25.8
Tp1g00610 Schrenkiella parvula HOM04D001990 ORTHO04D002104 6.1e-12 76.3 161 31.7
Bo8g118020 Brassica oleracea HOM04D001990 ORTHO04D002104 7.9e-12 75.9 213 26.8
Ca_05752.g Cicer arietinum HOM04D001990 ORTHO04D002104 1.0e-11 75.5 179 31.3
Medtr8g098335 Medicago truncatula HOM04D001990 ORTHO04D002104 1.3e-11 75.1 201 28.9
Brara.I05634 Brassica rapa HOM04D001990 ORTHO04D002104 2.5e-10 70.9 212 26.9
Carubv10009199m.g Capsella rubella HOM04D001990 ORTHO04D002104 5.7e-10 69.7 201 28.4
Tp2g00990 Schrenkiella parvula HOM04D010040 ORTHO04D012271 5.7e-10 69.7 765 22.1
HBR0402G053 Hevea brasiliensis HOM04D002642 ORTHO04D002780 1.3e-09 68.6 884 20.4
TPR.G12877 Trifolium pratense HOM04D001990 ORTHO04D002104 1.8e-08 64.7 263 27.8
GSVIVG01024972001 Vitis vinifera HOM04D002642 ORTHO04D002780 2.4e-08 64.3 744 21.8
LOC_Os04g47180 Oryza sativa ssp. japonica HOM04D001990 ORTHO04D002104 6.9e-08 62.8 912 21.4
ATR0559G060 Amborella trichopoda HOM04D002642 ORTHO04D002780 6.9e-08 62.8 698 22.8
Ciclev10013810m.g Citrus clementina HOM04D002642 ORTHO04D002780 1.2e-07 62.0 688 21.9
Potri.001G239500 Populus trichocarpa HOM04D002642 ORTHO04D002780 1.2e-07 62.0 881 21.6
PAB00062972 Picea abies HOM04D002652 ORTHO04D002942 1.2e-07 62.0 254 29.1
Migut.L01943 Erythranthe guttata HOM04D002642 ORTHO04D002780 2.6e-07 60.8 667 23.7
Solyc10g084750.1 Solanum lycopersicum HOM04D002642 ORTHO04D002780 7.7e-07 59.3 635 23.6
PGSC0003DMG400011004 Solanum tuberosum HOM04D002642 ORTHO04D002780 2.2e-06 57.8 644 24.1
PAB00062522 Picea abies HOM04D002652 ORTHO04D002942 2.9e-06 57.4 105 35.2
Prupe.6G078200 Prunus persica HOM04D002642 ORTHO04D002780 2.9e-06 57.4 152 30.9
Cc01_g17490 Coffea canephora HOM04D002652 ORTHO04D002942 2.9e-06 57.4 60 45.0
GSVIVG01025600001 Vitis vinifera HOM04D001956 ORTHO04D001923 2.9e-06 57.4 66 43.9
Manes.11G128400 Manihot esculenta HOM04D002642 ORTHO04D002780 3.8e-06 57.0 707 21.6
Zm00001d029849 Zea mays HOM04D001990 ORTHO04D002104 3.8e-06 57.0 777 22.4
LOC_Os10g40250 Oryza sativa ssp. japonica HOM04D001990 ORTHO04D002104 5.0e-06 56.6 951 21.2
Zm00001d047126 Zea mays HOM04D001990 ORTHO04D002104 6.5e-06 56.2 934 20.9
COL.COLO4_09164 Corchorus olitorius HOM04D001956 ORTHO04D001923 6.5e-06 56.2 67 41.8
ATR0787G113 Amborella trichopoda HOM04D002652 ORTHO04D002942 6.5e-06 56.2 83 37.3
RCO.g.30020.000002 Ricinus communis HOM04D002642 ORTHO04D002780 8.5e-06 55.8 166 30.7
Manes.09G091300 Manihot esculenta HOM04D002642 ORTHO04D002780 8.5e-06 55.8 875 20.5

Actinidia chinensis (4 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (3 genes)
Arabidopsis lyrata (4 genes)
Arabidopsis thaliana (4 genes)
Arachis ipaensis (3 genes)
Beta vulgaris (1 genes)
Brassica oleracea (7 genes)
Brassica rapa (6 genes)
Cajanus cajan (3 genes)
Capsella rubella (4 genes)
Capsicum annuum (0 genes)
Carica papaya (3 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (3 genes)
Citrullus lanatus (2 genes)
Citrus clementina (3 genes)
Coffea canephora (3 genes)
Corchorus olitorius (3 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (2 genes)
Daucus carota (5 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (3 genes)
Fragaria vesca (1 genes)
Glycine max (6 genes)
Gossypium raimondii (5 genes)
Hevea brasiliensis (6 genes)
Malus domestica (4 genes)
Manihot esculenta (7 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (3 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (3 genes)
Oryza sativa ssp. japonica (3 genes)
Petunia axillaris (2 genes)
Physcomitrium patens (0 genes)
Picea abies (2 genes)
Populus trichocarpa (4 genes)
Prunus persica (3 genes)
Pyrus bretschneideri (7 genes)
Ricinus communis (3 genes)
Schrenkiella parvula (5 genes)
Selaginella moellendorffii (0 genes)
Solanum lycopersicum (3 genes)
Solanum tuberosum (3 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (2 genes)
Trifolium pratense (3 genes)
Utricularia gibba (5 genes)
Vigna radiata var. radiata (3 genes)
Vitis vinifera (4 genes)
Zea mays (3 genes)
Ziziphus jujuba (2 genes)

Program Settings