Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Cpa.g.sc41.24	Carica papaya	HOM04D005535	ORTHO04D007022	4.0e-41	169.9	82	100.0
Cpa.g.sc41.30	Carica papaya	HOM04D005535	ORTHO04D007022	9.3e-30	132.1	127	59.8
TCA.TCM_021507	Theobroma cacao	HOM04D005535	ORTHO04D007022	3.1e-17	90.5	128	44.5
HBR0306G019	Hevea brasiliensis	HOM04D005535	ORTHO04D007022	6.9e-17	89.4	123	43.9
Manes.04G041300	Manihot esculenta	HOM04D005535	ORTHO04D007022	1.5e-16	88.2	123	43.1
Ciclev10021008m.g	Citrus clementina	HOM04D005535	ORTHO04D007022	1.5e-16	88.2	127	42.5
Achn086421	Actinidia chinensis	HOM04D005535	ORTHO04D007022	1.5e-16	88.2	127	42.5
COL.COLO4_21665	Corchorus olitorius	HOM04D005535	ORTHO04D007022	5.9e-16	86.3	128	41.4
Gorai.009G302100	Gossypium raimondii	HOM04D005535	ORTHO04D007022	1.7e-15	84.7	126	40.5
MELO3C017720	Cucumis melo	HOM04D005535	ORTHO04D007022	2.2e-15	84.3	125	40.0
ZJU.LOC107421848	Ziziphus jujuba	HOM04D005535	ORTHO04D007022	3.8e-15	83.6	128	40.6
Achn013231	Actinidia chinensis	HOM04D005535	ORTHO04D007022	5.0e-15	83.2	124	40.3
GSVIVG01010747001	Vitis vinifera	HOM04D005535	ORTHO04D007022	1.1e-14	82.0	123	40.7
Potri.007G127500	Populus trichocarpa	HOM04D005535	ORTHO04D007022	1.9e-14	81.3	126	38.1
DCAR_003909	Daucus carota	HOM04D005535	ORTHO04D007022	1.9e-14	81.3	122	37.7
RCO.g.28011.000003	Ricinus communis	HOM04D005535	ORTHO04D007022	2.5e-14	80.9	123	39.0
NNU_02731	Nelumbo nucifera	HOM04D005535	ORTHO04D007022	5.5e-14	79.7	123	40.7
Bv3_056900_ipjm	Beta vulgaris	HOM04D005535	ORTHO04D007022	1.2e-13	78.6	123	39.8
Medtr2g098650	Medicago truncatula	HOM04D005535	ORTHO04D007022	1.6e-13	78.2	128	35.9
AH019966	Amaranthus hypochondriacus	HOM04D005535	ORTHO04D007022	7.9e-13	75.9	123	38.2
Peaxi162Scf00375g00059	Petunia axillaris	HOM04D005535	ORTHO04D007022	2.3e-12	74.3	122	36.1
Prupe.1G191500	Prunus persica	HOM04D005535	ORTHO04D007022	2.3e-12	74.3	125	36.8
Araip.14VDU	Arachis ipaensis	HOM04D005535	ORTHO04D007022	3.9e-12	73.6	128	35.2
TPR.G18871	Trifolium pratense	HOM04D005535	ORTHO04D007022	8.8e-12	72.4	128	34.4
Cc05_g03950	Coffea canephora	HOM04D005535	ORTHO04D007022	8.8e-12	72.4	119	37.8
Cc05_g13970	Coffea canephora	HOM04D005535	ORTHO04D007022	8.8e-12	72.4	119	37.8
Cc08_g05980	Coffea canephora	HOM04D005535	ORTHO04D007022	1.1e-11	72.0	119	37.8
FVE21692	Fragaria vesca	HOM04D005535	ORTHO04D007022	1.1e-11	72.0	116	41.4
AUR62002291	Chenopodium quinoa	HOM04D005535	ORTHO04D007022	2.0e-11	71.2	123	39.0
Brara.A01981	Brassica rapa	HOM04D005535	ORTHO04D007022	3.3e-11	70.5	128	36.7
Tp7g13790	Schrenkiella parvula	HOM04D005535	ORTHO04D007022	3.3e-11	70.5	128	35.9
AL5G41280	Arabidopsis lyrata	HOM04D005535	ORTHO04D007022	3.3e-11	70.5	126	35.7
Eucgr.A00272	Eucalyptus grandis	HOM04D005535	ORTHO04D007022	4.4e-11	70.1	126	35.7
THA.LOC104803670	Tarenaya hassleriana	HOM04D005535	ORTHO04D007022	9.7e-11	68.9	128	36.7
Ca_02680.g	Cicer arietinum	HOM04D005535	ORTHO04D007022	9.7e-11	68.9	125	32.8
Bo1g056660	Brassica oleracea	HOM04D005535	ORTHO04D007022	9.7e-11	68.9	128	35.2
Glyma.13G343600	Glycine max	HOM04D005535	ORTHO04D007022	1.3e-10	68.6	134	33.6
AUR62015400	Chenopodium quinoa	HOM04D005535	ORTHO04D007022	1.3e-10	68.6	123	37.4
Eucgr.A00076	Eucalyptus grandis	HOM04D005535	ORTHO04D007022	3.7e-10	67.0	128	34.4
LOC_Os09g33930	Oryza sativa ssp. japonica	HOM04D005535	ORTHO04D007022	3.7e-10	67.0	120	35.0
Migut.G00958	Erythranthe guttata	HOM04D005535	ORTHO04D007022	6.3e-10	66.2	121	37.2
AT3G59380	Arabidopsis thaliana	HOM04D005535	ORTHO04D007022	6.3e-10	66.2	126	34.9
Carubv10017596m.g	Capsella rubella	HOM04D005535	ORTHO04D007022	8.2e-10	65.9	126	34.9
MDO.mRNA.g.2604.24	Malus domestica	HOM04D005535	ORTHO04D007022	1.8e-09	64.7	121	33.9
Pbr002714.1.g	Pyrus bretschneideri	HOM04D005535	ORTHO04D007022	1.8e-09	64.7	121	33.9
Pbr037280.1.g	Pyrus bretschneideri	HOM04D005535	ORTHO04D007022	2.4e-09	64.3	121	33.9
Zm00001d006118	Zea mays	HOM04D005535	ORTHO04D007022	3.1e-09	63.9	125	36.8
UGI.Scf00644.18015	Utricularia gibba	HOM04D005535	ORTHO04D007022	5.3e-09	63.2	126	32.5
Vradi0332s00020	Vigna radiata var. radiata	HOM04D005535	ORTHO04D007022	7.0e-09	62.8	134	31.3
PAB00002621	Picea abies	HOM04D005535	ORTHO04D007022	7.7e-08	59.3	120	34.2
CAN.G65.180	Capsicum annuum	HOM04D005535	ORTHO04D007022	1.0e-07	58.9	37	67.6
C.cajan_13445.g	Cajanus cajan	HOM04D005535	ORTHO04D007022	1.7e-07	58.2	134	29.9
Solyc06g073390.2	Solanum lycopersicum	HOM04D005535	ORTHO04D007022	2.9e-07	57.4	37	64.9
Eucgr.A00077	Eucalyptus grandis	HOM04D005535	ORTHO04D007022	2.9e-07	57.4	36	72.2
Cla010850.g	Citrullus lanatus	HOM04D005535	ORTHO04D007022	2.9e-07	57.4	57	57.9
Cucsa.094840	Cucumis sativus L.	HOM04D005535	ORTHO04D007022	6.5e-07	56.2	30	80.0
Glyma.15G030700	Glycine max	HOM04D005535	ORTHO04D007022	1.4e-06	55.1	55	54.5
ATR0743G276	Amborella trichopoda	HOM04D005535	ORTHO04D007022	1.4e-06	55.1	122	32.0
PGSC0003DMG400027009	Solanum tuberosum	HOM04D005535	ORTHO04D007022	2.5e-06	54.3	37	59.5

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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