Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
AT3G26360	Arabidopsis thaliana	HOM04D006928	ORTHO04D008927	1.0e-46	188.7	102	100.0
Carubv10018299m.g	Capsella rubella	HOM04D006928	ORTHO04D008927	1.3e-41	171.8	102	92.2
AL5G15130	Arabidopsis lyrata	HOM04D006928	ORTHO04D008927	1.7e-41	171.4	102	93.1
Tp2g15510	Schrenkiella parvula	HOM04D006928	ORTHO04D008927	2.3e-41	171.0	102	92.2
Bo2g139120	Brassica oleracea	HOM04D006928	ORTHO04D008927	1.5e-40	168.3	102	91.2
Brara.B03232	Brassica rapa	HOM04D006928	ORTHO04D008927	1.5e-40	168.3	102	91.2
Brara.F03277	Brassica rapa	HOM04D006928	ORTHO04D008927	5.6e-40	166.4	102	91.2
Bo7g082620	Brassica oleracea	HOM04D006928	ORTHO04D008927	9.5e-40	165.6	102	90.2
THA.LOC104805276	Tarenaya hassleriana	HOM04D006928	ORTHO04D008927	1.3e-33	145.2	102	78.4
THA.LOC104824009	Tarenaya hassleriana	HOM04D006928	ORTHO04D008927	3.0e-33	144.1	102	78.4
ZJU.LOC107428472	Ziziphus jujuba	HOM04D006928	ORTHO04D008927	1.9e-27	124.8	109	63.3
GSVIVG01003295001	Vitis vinifera	HOM04D006928	ORTHO04D008927	9.2e-27	122.5	107	64.5
COL.COLO4_23485	Corchorus olitorius	HOM04D006928	ORTHO04D008927	1.2e-26	122.1	106	63.2
Ciclev10033123m.g	Citrus clementina	HOM04D006928	ORTHO04D008927	2.7e-26	120.9	113	60.2
TCA.TCM_010596	Theobroma cacao	HOM04D006928	ORTHO04D008927	4.6e-26	120.2	111	59.5
CAN.G128.103	Capsicum annuum	HOM04D002352	ORTHO04D001538	3.9e-25	117.1	98	65.3
DCAR_003344	Daucus carota	HOM04D006928	ORTHO04D008927	1.1e-24	115.5	105	61.9
Bv5_119790_pora	Beta vulgaris	HOM04D006928	ORTHO04D008927	3.3e-24	114.0	107	58.9
Eucgr.B03269	Eucalyptus grandis	HOM04D006928	ORTHO04D008927	4.3e-24	113.6	110	60.0
Manes.13G021600	Manihot esculenta	HOM04D006928	ORTHO04D008927	4.3e-24	113.6	112	57.1
Solyc10g054060.1	Solanum lycopersicum	HOM04D006928	ORTHO04D008927	4.3e-24	113.6	102	64.7
Gorai.009G233700	Gossypium raimondii	HOM04D006928	ORTHO04D008927	4.3e-24	113.6	111	61.3
ATR0691G211	Amborella trichopoda	HOM04D006928	ORTHO04D008927	5.6e-24	113.2	90	64.4
HBR0932G006	Hevea brasiliensis	HOM04D006928	ORTHO04D008927	7.3e-24	112.8	107	56.1
FVE10522	Fragaria vesca	HOM04D006928	ORTHO04D008927	1.2e-23	112.1	110	60.0
Prupe.5G046400	Prunus persica	HOM04D006928	ORTHO04D008927	1.6e-23	111.7	111	59.5
RCO.g.29792.000025	Ricinus communis	HOM04D006928	ORTHO04D008927	2.1e-23	111.3	105	59.0
Glyma.18G249300	Glycine max	HOM04D006928	ORTHO04D008927	3.6e-23	110.5	113	55.8
AH004463	Amaranthus hypochondriacus	HOM04D006928	ORTHO04D008927	1.1e-22	109.0	107	57.9
C.cajan_37206.g	Cajanus cajan	HOM04D006928	ORTHO04D008927	1.4e-22	108.6	112	56.2
Glyma.09G244200	Glycine max	HOM04D006928	ORTHO04D008927	1.4e-22	108.6	113	56.6
Cc01_g03580	Coffea canephora	HOM04D006928	ORTHO04D008927	1.8e-22	108.2	107	56.1
Cla017279.g	Citrullus lanatus	HOM04D006928	ORTHO04D008927	1.8e-22	108.2	104	60.6
AUR62024237	Chenopodium quinoa	HOM04D006928	ORTHO04D008927	1.8e-22	108.2	104	58.7
Cucsa.248980	Cucumis sativus L.	HOM04D006928	ORTHO04D008927	3.1e-22	107.5	100	61.0
MDO.mRNA.g.2576.7	Malus domestica	HOM04D006928	ORTHO04D008927	3.1e-22	107.5	87	60.9
Peaxi162Scf00128g00434	Petunia axillaris	HOM04D006928	ORTHO04D008927	3.1e-22	107.5	100	63.0
Migut.K00615	Erythranthe guttata	HOM04D006928	ORTHO04D008927	4.0e-22	107.1	98	62.2
Pbr014575.1.g	Pyrus bretschneideri	HOM04D006928	ORTHO04D008927	3.4e-21	104.0	108	50.9
TPR.G32914	Trifolium pratense	HOM04D006928	ORTHO04D008927	4.4e-21	103.6	111	55.0
Peaxi162Scf00067g00116	Petunia axillaris	HOM04D006928	ORTHO04D008927	4.4e-21	103.6	99	61.6
AUR62005503	Chenopodium quinoa	HOM04D006928	ORTHO04D008927	4.4e-21	103.6	97	59.8
Cpa.g.c31584	Carica papaya	HOM04D006928	ORTHO04D008927	7.5e-21	102.8	107	55.1
Pbr005301.1.g	Pyrus bretschneideri	HOM04D006928	ORTHO04D008927	2.2e-20	101.3	108	50.0
Potri.010G048600	Populus trichocarpa	HOM04D006928	ORTHO04D008927	3.7e-20	100.5	114	50.9
Ca_09026.g	Cicer arietinum	HOM04D006928	ORTHO04D008927	1.4e-19	98.6	110	52.7
Achn390121	Actinidia chinensis	HOM04D006928	ORTHO04D008927	1.7e-17	91.7	107	52.3
PAB00030388	Picea abies	HOM04D006928	ORTHO04D008927	1.5e-16	88.6	94	54.3
NNU_05996	Nelumbo nucifera	HOM04D006928	ORTHO04D008927	1.5e-16	88.6	81	55.6
Medtr3g464760	Medicago truncatula	HOM04D006928	ORTHO04D008927	1.5e-16	88.6	113	49.6
Zm00001d013509	Zea mays	HOM04D006928	ORTHO04D008927	2.5e-16	87.8	80	55.0
Zm00001d033589	Zea mays	HOM04D006928	ORTHO04D008927	3.6e-15	84.0	80	52.5
LOC_Os03g48830	Oryza sativa ssp. japonica	HOM04D006928	ORTHO04D008927	4.0e-14	80.5	104	44.2
MDO.mRNA.g.1191.8	Malus domestica	HOM04D006928	ORTHO04D008927	2.2e-12	74.7	57	59.6
Araip.6VR42	Arachis ipaensis	HOM04D006928	ORTHO04D008927	2.4e-11	71.2	110	41.8
UGI.Scf00007.1209	Utricularia gibba	HOM04D006928	ORTHO04D008927	1.5e-08	62.0	53	62.3
NNU_23080	Nelumbo nucifera	HOM04D006928	ORTHO04D008927	4.3e-08	60.5	61	52.5
Medtr3g450960	Medicago truncatula	HOM04D006928	ORTHO04D008927	1.2e-07	58.9	51	58.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment