Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
AL8G43810	Arabidopsis lyrata	HOM04D007208	ORTHO04D009144	1.8e-28	128.3	109	100.0
AT5G67490	Arabidopsis thaliana	HOM04D007208	ORTHO04D009144	8.3e-26	119.4	109	87.2
Carubv10028448m.g	Capsella rubella	HOM04D007208	ORTHO04D009144	7.8e-24	112.8	109	80.7
Brara.F02475	Brassica rapa	HOM04D007208	ORTHO04D009144	1.0e-23	112.5	109	70.6
Tp2g29160	Schrenkiella parvula	HOM04D007208	ORTHO04D009144	9.5e-22	105.9	110	68.2
Bo3g096440	Brassica oleracea	HOM04D007208	ORTHO04D009144	4.7e-21	103.6	110	74.5
LOC_Os06g06330	Oryza sativa ssp. japonica	HOM04D007208	ORTHO04D009144	4.4e-11	70.5	32	93.8
AUR62010038	Chenopodium quinoa	HOM04D007208	ORTHO04D009144	4.4e-11	70.5	32	90.6
AUR62013031	Chenopodium quinoa	HOM04D007208	ORTHO04D009144	4.4e-11	70.5	32	90.6
Manes.06G159200	Manihot esculenta	HOM04D007208	ORTHO04D009144	7.6e-11	69.7	32	90.6
HBR2576G021	Hevea brasiliensis	HOM04D007208	ORTHO04D009144	7.6e-11	69.7	32	90.6
Ciclev10006260m.g	Citrus clementina	HOM04D007208	ORTHO04D009144	1.7e-10	68.6	32	87.5
ATR0762G055	Amborella trichopoda	HOM04D007208	ORTHO04D009144	2.2e-10	68.2	32	87.5
Glyma.07G086800	Glycine max	HOM04D007208	ORTHO04D009144	2.2e-10	68.2	32	84.4
Glyma.09G190100	Glycine max	HOM04D007208	ORTHO04D009144	2.2e-10	68.2	32	84.4
Gorai.007G014800	Gossypium raimondii	HOM04D007208	ORTHO04D009144	2.2e-10	68.2	32	84.4
ATR0037G036	Amborella trichopoda	HOM04D007208	ORTHO04D009144	2.2e-10	68.2	32	87.5
Bv9_214030_skfx	Beta vulgaris	HOM04D007208	ORTHO04D009144	2.9e-10	67.8	32	87.5
AH006631	Amaranthus hypochondriacus	HOM04D007208	ORTHO04D009144	2.9e-10	67.8	32	87.5
Pbr022742.1.g	Pyrus bretschneideri	HOM04D007208	ORTHO04D009144	2.9e-10	67.8	32	84.4
RCO.g.30169.000279	Ricinus communis	HOM04D007208	ORTHO04D009144	3.8e-10	67.4	32	87.5
TPR.G14875	Trifolium pratense	HOM04D007208	ORTHO04D009144	4.9e-10	67.0	32	81.2
Potri.015G017700	Populus trichocarpa	HOM04D007208	ORTHO04D009144	4.9e-10	67.0	32	84.4
Mapoly0007s0050	Marchantia polymorpha	HOM04D007208	ORTHO04D009144	4.9e-10	67.0	32	84.4
NNU_20691	Nelumbo nucifera	HOM04D000282	ORTHO04D009144	4.9e-10	67.0	32	87.5
PGSC0003DMG400009118	Solanum tuberosum	HOM04D007208	ORTHO04D009144	6.4e-10	66.6	32	87.5
Solyc03g083450.1	Solanum lycopersicum	HOM04D007208	ORTHO04D009144	6.4e-10	66.6	32	87.5
Vradi01g04150	Vigna radiata var. radiata	HOM04D007208	ORTHO04D009144	6.4e-10	66.6	32	81.2
Peaxi162Scf00550g00426	Petunia axillaris	HOM04D007208	ORTHO04D009144	8.4e-10	66.2	32	84.4
Pbr005432.1.g	Pyrus bretschneideri	HOM04D007208	ORTHO04D009144	8.4e-10	66.2	32	84.4
Eucgr.A01472	Eucalyptus grandis	HOM04D007208	ORTHO04D009144	8.4e-10	66.2	32	84.4
Cpa.g.sc3.64	Carica papaya	HOM04D007208	ORTHO04D009144	1.1e-09	65.9	31	87.1
COL.COLO4_03426	Corchorus olitorius	HOM04D007208	ORTHO04D009144	1.1e-09	65.9	32	81.2
Achn045991	Actinidia chinensis	HOM04D001391	ORTHO04D004381	1.1e-09	65.9	30	90.0
Zm00001d045296	Zea mays	HOM04D007208	ORTHO04D009144	1.4e-09	65.5	32	84.4
TPR.G1327	Trifolium pratense	HOM04D007208	ORTHO04D009144	2.4e-09	64.7	31	80.6
C.cajan_27601.g	Cajanus cajan	HOM04D007208	ORTHO04D009144	2.4e-09	64.7	30	86.7
Medtr3g109290	Medicago truncatula	HOM04D007208	ORTHO04D009144	3.2e-09	64.3	30	83.3
PAB00037483	Picea abies	HOM04D007208	ORTHO04D009144	3.2e-09	64.3	32	84.4
Araip.IIQ50	Arachis ipaensis	HOM04D007208	ORTHO04D009144	3.2e-09	64.3	32	78.1
CAN.G108.61	Capsicum annuum	HOM04D007208	ORTHO04D009144	7.1e-09	63.2	32	84.4
Achn178511	Actinidia chinensis	HOM04D007208	ORTHO04D009144	2.1e-08	61.6	31	80.6
Pp3c23_5100	Physcomitrium patens	HOM04D007208	ORTHO04D009144	2.1e-08	61.6	32	75.0
Cucsa.202070	Cucumis sativus L.	HOM04D007208	ORTHO04D009144	4.6e-08	60.5	30	83.3
TCA.TCM_015376	Theobroma cacao	HOM04D007208	ORTHO04D009144	4.6e-08	60.5	28	85.7
Cla004900.g	Citrullus lanatus	HOM04D007208	ORTHO04D009144	6.0e-08	60.1	32	71.9
Achn178501	Actinidia chinensis	HOM04D007208	ORTHO04D009144	1.0e-07	59.3	28	82.1
Pbr013588.1.g	Pyrus bretschneideri	HOM04D007208	ORTHO04D009144	1.0e-07	59.3	29	82.8
MCO04G224	Micromonas commoda	HOM04D007208	ORTHO04D009144	2.3e-07	58.2	31	77.4
Cre02.g073800	Chlamydomonas reinhardtii	HOM04D007208	ORTHO04D009144	6.6e-07	56.6	31	74.2
Achn047021	Actinidia chinensis	HOM04D002085	ORTHO04D002474	4.3e-06	53.9	25	88.0
Prupe.2G311900	Prunus persica	HOM04D007208	ORTHO04D009144	7.3e-06	53.1	27	74.1

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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