Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00001G00630	Physcomitrella patens	0.0	516	257	100.00
PP00061G00310	Physcomitrella patens	1e-161	459	257	86.77
PP00038G00080	Physcomitrella patens	1e-158	448	257	85.60
PP00317G00130	Physcomitrella patens	7e-152	434	258	81.78
PP00106G00200	Physcomitrella patens	4e-149	427	247	81.38
OS09G36450	Oryza sativa	6e-136	392	257	72.37
AT2G21170	Arabidopsis thaliana	7e-135	390	257	72.76
OL21G01760	Ostreococcus lucimarinus	1e-111	329	254	63.78
OM_10G00120	Ostreococcus mediterraneus	1e-111	331	250	63.60
OL09G00070	Ostreococcus lucimarinus	3e-111	329	254	63.78
ORCC809_09G05850	Ostreococcus sp RCC809	1e-110	328	254	64.17
AC00G59770	Asterochloris sp. Cgr-DA1pho v2.0	1e-110	327	252	62.70
CV00G46680	Coccomyxa subellipsoidea C-169	2e-110	325	248	62.50
OT_09G00120	Ostreococcus tauri	6e-110	326	254	62.60
RCC4223.03g08550	Picochlorum_RCC4223	3e-109	324	256	61.72
ATR_00012G01630	Amborella trichopoda	7e-109	322	252	63.49
PI00G29250	Picochlorum sp. SENEW3 (SE3)	1e-108	322	256	61.33
MRCC299_14G03860	Micromonas sp RCC299	1e-108	323	250	62.00
OS01G05490	Oryza sativa	1e-107	318	251	62.15
BPRRCC1105_10G04160	Bathycoccus prasinos	3e-106	317	253	59.29
MP03G00170	Micromonas pusilla strain CCMP1545	5e-106	314	250	62.00
AT3G55440	Arabidopsis thaliana	2e-105	313	252	61.11
CR01G06410	Chlamydomonas reinhardtii	1e-104	312	246	60.98
AC00G79530	Asterochloris sp. Cgr-DA1pho v2.0	4e-104	310	240	62.92
VC00G17610	Volvox carteri	5e-103	308	244	60.66
PI00G15910	Picochlorum sp. SENEW3 (SE3)	1e-101	303	244	61.07
MRCC299_10G05280	Micromonas sp RCC299	8e-100	301	269	57.62
OL20G02630	Ostreococcus lucimarinus	9e-100	301	263	58.94
CV00G82440	Coccomyxa subellipsoidea C-169	2e-99	298	248	61.69
CNC64A_015G02530	Chlorella sp NC64A	6e-99	298	248	56.85
RCC4223.02g06140	Picochlorum_RCC4223	2e-98	295	244	59.02
CNC64A_016G01040	Chlorella sp NC64A	1e-97	293	245	64.90
AP00G06050	Auxenochlorella protothecoides	5e-97	291	245	61.63
AP00G02850	Auxenochlorella protothecoides	7e-97	317	255	62.35
HE0000G46940	Helicosporidium sp.	1e-95	288	233	61.80
BPRRCC1105_12G01650	Bathycoccus prasinos	2e-95	290	266	56.39
OS01G62420	Oryza sativa	5e-95	286	252	59.13
gsu71130	Galdieria sulphuraria	2e-94	286	253	56.92
PP00101G00460	Physcomitrella patens	1e-93	292	251	56.57
OM_02G02140	Ostreococcus mediterraneus	1e-93	285	264	58.33
PP00003G01180	Physcomitrella patens	2e-93	282	245	56.73
ccr169320	Chondrus crispus	8e-92	278	251	55.78
WBGene00006601	Caenorhabditis elegans	4e-91	276	245	59.18
MP08G00120	Micromonas pusilla strain CCMP1545	4e-90	278	264	55.68
HE0000G58200	Helicosporidium sp.	2e-87	268	237	57.38
ccr22760	Chondrus crispus	5e-87	268	253	54.55
ES0187G00210	Ectocarpus siliculosus	9e-87	276	243	58.02
SPCC24B10.21	Schizosaccharomyces pombe	1e-86	265	243	54.32
FBgn0086355	Drosophila melanogaster	4e-86	267	243	55.14
phs144980	Phytophtora sojae	1e-84	260	248	54.84
YDR050C	Saccharomyces cerevisiae strain S288C	1e-84	259	243	52.26
TP05G01950	Thalassiosira pseudonana	1e-84	271	251	56.18
CM17G01720	Cyanidioschyzon merolae	1e-84	261	254	54.33
ES0398G00040	Ectocarpus siliculosus	1e-83	257	254	55.51
DDB_G0274471	Dictyostelium discoideum	3e-82	254	256	49.61
FC007G03580	Fragilariopsis cylindrus	1e-80	260	244	54.92
pte223170	Paramecium tetraurelia	2e-80	249	247	54.25
pte81300	Paramecium tetraurelia	4e-80	248	247	53.04
TP18G01290	Thalassiosira pseudonana	1e-77	243	255	50.59
Naga_100001g84	Nannochloropsis gaditana	1e-77	243	253	54.15
PTI_02G03330	Phaeodactylum tricornutum	3e-77	251	249	51.41
PTI_13G03000	Phaeodactylum tricornutum	8e-72	228	252	48.81
AA0023G00520	Aureococcus anophagefferens	2e-70	224	251	52.59
ORCC809_16G02620	Ostreococcus sp RCC809	3e-68	218	255	42.75
AA0097G00010	Aureococcus anophagefferens	2e-66	213	250	50.80
pte129390	Paramecium tetraurelia	1e-63	206	250	45.60
FC002G10470	Fragilariopsis cylindrus	4e-63	205	254	47.24
emh90550	Emiliania huxleyi	1e-61	201	248	46.37
emh478420	Emiliania huxleyi	2e-61	200	248	46.37
RCC4223.920g00300	Picochlorum_RCC4223	2e-59	195	249	43.37
AA0010G01220	Aureococcus anophagefferens	8e-55	183	258	43.80
TP06G02010	Thalassiosira pseudonana	7e-51	174	247	41.70
PTI_02G04090	Phaeodactylum tricornutum	9e-50	172	246	41.46
ATR_00041G02570	Amborella trichopoda	9e-49	163	111	69.37
emh455820	Emiliania huxleyi	4e-48	166	249	43.37
emh217900	Emiliania huxleyi	4e-48	166	249	43.37
FC007G04910	Fragilariopsis cylindrus	6e-48	167	246	41.46
PTI_02G05870	Phaeodactylum tricornutum	7e-48	167	249	40.56
TP07G06060	Thalassiosira pseudonana	1e-47	166	272	41.54
FC013G01160	Fragilariopsis cylindrus	2e-46	164	264	40.53
OL13G00610	Ostreococcus lucimarinus	3e-46	160	245	40.00
OM_08G03850	Ostreococcus mediterraneus	9e-44	161	255	38.82
AA0017G00470	Aureococcus anophagefferens	1e-43	153	215	42.33
BPRRCC1105_02G05760	Bathycoccus prasinos	1e-43	162	214	43.93
FC008G00530	Fragilariopsis cylindrus	2e-43	154	253	38.34
OT_13G00620	Ostreococcus tauri	2e-42	157	245	39.59
AA0006G00830	Aureococcus anophagefferens	1e-41	149	242	37.19
MP03G08560	Micromonas pusilla strain CCMP1545	7e-41	154	250	38.40
AA0001G01280	Aureococcus anophagefferens	8e-40	145	242	38.02
TP10G03660	Thalassiosira pseudonana	6e-38	137	189	42.33
ORCC809_13G02440	Ostreococcus sp RCC809	5e-31	124	157	42.68
PP00054G01430	Physcomitrella patens	2e-25	101	78	67.95
ES0238G00220	Ectocarpus siliculosus	1e-22	97.8	245	29.80
FC007G09310	Fragilariopsis cylindrus	3e-16	77.8	90	44.44
Naga_103287g1	Nannochloropsis gaditana	5e-14	70.1	69	53.62

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
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