Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS08G14230	Oryza sativa	0.0	1336	644	100.00
OS04G51440	Oryza sativa	0.0	1084	636	81.29
OS06G44890	Oryza sativa	0.0	981	635	70.55
ATR_00019G03480	Amborella trichopoda	0.0	971	640	73.28
AT4G30160	Arabidopsis thaliana	0.0	961	643	71.07
AT5G57320	Arabidopsis thaliana	0.0	913	632	66.77
AT2G41740	Arabidopsis thaliana	0.0	701	642	53.43
AT3G57410	Arabidopsis thaliana	0.0	686	644	52.95
ATR_00029G03990	Amborella trichopoda	0.0	681	637	54.16
OS03G24220	Oryza sativa	0.0	661	639	50.86
ATR_00025G04050	Amborella trichopoda	0.0	633	593	51.26
PP00299G00050	Physcomitrella patens	0.0	627	634	49.37
PP00100G00130	Physcomitrella patens	0.0	611	642	47.98
AT2G29890	Arabidopsis thaliana	0.0	607	643	47.59
PP00020G00410	Physcomitrella patens	0.0	583	623	47.67
OS05G06110	Oryza sativa	0.0	560	636	44.03
phs187620	Phytophtora sojae	9e-116	375	648	35.96
emh397080	Emiliania huxleyi	2e-107	350	630	35.08
ENSG00000148180	Homo sapiens	3e-103	338	646	34.52
ENSMUSG00000026879	Mus musculus	1e-102	336	642	33.80
ENSMUSG00000002565	Mus musculus	2e-93	310	647	31.53
ENSG00000006747	Homo sapiens	2e-90	302	639	31.30
MRCC299_16G00860	Micromonas sp RCC299	1e-86	296	673	31.95
ENSG00000127831	Homo sapiens	5e-86	293	632	32.75
ENSG00000135407	Homo sapiens	1e-83	286	618	31.23
FBgn0010225	Drosophila melanogaster	8e-79	273	667	31.33
ES0234G00020	Ectocarpus siliculosus	8e-77	266	655	30.23
ENSMUSG00000025432	Mus musculus	2e-75	264	643	31.26
Naga_100078g6	Nannochloropsis gaditana	3e-68	244	670	30.30
DDB_G0289327	Dictyostelium discoideum	6e-66	227	344	42.73
ENSG00000136059	Homo sapiens	2e-65	236	637	29.83
DDB_G0276453	Dictyostelium discoideum	2e-55	207	674	28.04
emh704000	Emiliania huxleyi	1e-52	192	355	36.90
emh154230	Emiliania huxleyi	1e-52	192	355	36.90
FBgn0000709	Drosophila melanogaster	2e-51	197	678	26.40
CV00G92530	Coccomyxa subellipsoidea C-169	4e-51	182	228	42.11
ENSG00000042493	Homo sapiens	5e-51	185	347	34.29
emh403020	Emiliania huxleyi	1e-48	180	373	31.37
emh184940	Emiliania huxleyi	1e-48	180	373	31.37
TP06G01190	Thalassiosira pseudonana	4e-46	172	349	35.24
WBGene00010593	Caenorhabditis elegans	8e-46	174	350	32.57
PTI_01G05030	Phaeodactylum tricornutum	1e-43	166	394	32.74
PTI_04G04220	Phaeodactylum tricornutum	5e-43	163	357	32.77
DDB_G0288557	Dictyostelium discoideum	8e-43	171	522	27.59
DDB_G0282725	Dictyostelium discoideum	1e-42	170	527	27.89
VC00G19130	Volvox carteri	5e-40	160	643	25.04
CR12G13840	Chlamydomonas reinhardtii	1e-39	159	694	25.50
MP09G04410	Micromonas pusilla strain CCMP1545	1e-39	159	569	27.59
emh363800	Emiliania huxleyi	3e-39	152	341	32.84
AA0001G05200	Aureococcus anophagefferens	1e-38	146	190	43.68
AA0258G00030	Aureococcus anophagefferens	1e-38	146	190	43.68
ccr125580	Chondrus crispus	2e-38	151	307	34.53
WBGene00001443	Caenorhabditis elegans	2e-37	153	697	26.69
FC022G02270	Fragilariopsis cylindrus	3e-35	141	364	29.40
FBgn0003187	Drosophila melanogaster	4e-28	124	636	24.69
DDB_G0271058	Dictyostelium discoideum	8e-27	120	531	24.86
ENSMUSG00000024236	Mus musculus	1e-19	98.2	558	24.55
ENSG00000197321	Homo sapiens	2e-17	91.3	558	23.48
DDB_G0291125	Dictyostelium discoideum	7e-17	89.0	527	22.39
DDB_G0291536	Dictyostelium discoideum	9e-17	89.0	663	21.27
emh23860	Emiliania huxleyi	7e-15	76.3	73	43.84
FBgn0266696	Drosophila melanogaster	1e-10	69.3	582	21.82

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment