Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OM_09G03190	Ostreococcus mediterraneus	0.0	2620	1262	100.00
OT_03G03070	Ostreococcus tauri	0.0	1632	1289	67.73
ORCC809_06G04200	Ostreococcus sp RCC809	0.0	1583	1241	66.16
OL03G03010	Ostreococcus lucimarinus	0.0	1575	1253	66.40
MRCC299_04G04580	Micromonas sp RCC299	0.0	1160	1159	56.26
MP05G03560	Micromonas pusilla strain CCMP1545	0.0	868	666	67.42
ATR_00054G00710	Amborella trichopoda	0.0	827	1145	42.79
PP00112G00240	Physcomitrella patens	0.0	822	1137	44.33
PP00070G01260	Physcomitrella patens	0.0	823	1165	42.06
AC00G52180	Asterochloris sp. Cgr-DA1pho v2.0	0.0	808	1141	41.98
PI00G33720	Picochlorum sp. SENEW3 (SE3)	0.0	810	1056	45.45
RCC4223.09g01180	Picochlorum_RCC4223	0.0	807	1056	45.55
CV00G92490	Coccomyxa subellipsoidea C-169	0.0	807	1116	43.82
AT5G15070	Arabidopsis thaliana	0.0	803	1153	41.63
AT3G01310	Arabidopsis thaliana	0.0	802	1147	41.85
CNC64A_005G01870	Chlorella sp NC64A	0.0	795	1164	42.01
OS01G56980	Oryza sativa	0.0	788	1131	41.82
OS03G48300	Oryza sativa	0.0	635	631	53.09
CR03G09710	Chlamydomonas reinhardtii	0.0	626	745	47.52
BPRRCC1105_09G03180	Bathycoccus prasinos	0.0	596	493	62.47
phs362880	Phytophtora sojae	0.0	581	983	37.95
FBgn0027279	Drosophila melanogaster	2e-168	554	630	48.73
ENSG00000145725	Homo sapiens	3e-165	534	623	49.28
VC00G146720	Volvox carteri	3e-154	510	521	51.44
WBGene00018508	Caenorhabditis elegans	4e-154	505	666	44.59
TP02G08430	Thalassiosira pseudonana	7e-154	493	623	44.78
FC005G10040	Fragilariopsis cylindrus	5e-152	486	874	36.84
emh483710	Emiliania huxleyi	3e-145	473	666	40.24
pte664940	Paramecium tetraurelia	4e-139	457	749	38.58
pte599340	Paramecium tetraurelia	4e-138	454	757	39.37
AA0014G02190	Aureococcus anophagefferens	6e-138	446	679	40.35
emh565740	Emiliania huxleyi	7e-134	434	851	37.02
HE0000G10040	Helicosporidium sp.	1e-133	424	470	49.15
emh92080	Emiliania huxleyi	9e-123	404	651	40.25
emh375850	Emiliania huxleyi	2e-112	375	555	42.70
CR01G11320	Chlamydomonas reinhardtii	2e-109	387	348	54.60
SPCC1672.06c	Schizosaccharomyces pombe	5e-105	360	608	38.49
AP00G16430	Auxenochlorella protothecoides	5e-103	352	662	37.92
phs223530	Phytophtora sojae	9e-97	338	300	56.67
VC00G13030	Volvox carteri	2e-95	344	421	46.08
PTI_11G00860	Phaeodactylum tricornutum	2e-93	333	380	47.11
ES0425G00030	Ectocarpus siliculosus	6e-91	326	481	38.88
emh739850	Emiliania huxleyi	9e-90	318	342	47.95
gsu105930	Galdieria sulphuraria	6e-81	276	348	43.10
DDB_G0284617	Dictyostelium discoideum	4e-76	266	334	42.22
CM09G02100	Cyanidioschyzon merolae	2e-75	259	365	41.64
CM09G02370	Cyanidioschyzon merolae	4e-75	258	359	42.06
ccr179200	Chondrus crispus	3e-49	183	329	38.30
Naga_101571g1	Nannochloropsis gaditana	3e-35	140	120	55.83
HE0000G36530	Helicosporidium sp.	2e-20	97.1	150	38.00
emh07790	Emiliania huxleyi	9e-17	85.9	121	40.50
OS01G56960	Oryza sativa	3e-13	76.6	245	28.57

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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