Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OL03G03010	Ostreococcus lucimarinus	0.0	2300	1108	100.00
ORCC809_06G04200	Ostreococcus sp RCC809	0.0	1763	1117	78.60
OM_09G03190	Ostreococcus mediterraneus	0.0	1597	1258	66.61
OT_03G03070	Ostreococcus tauri	0.0	1481	1035	74.69
MRCC299_04G04580	Micromonas sp RCC299	0.0	1164	1049	60.25
ATR_00054G00710	Amborella trichopoda	0.0	872	1032	46.80
OS03G48300	Oryza sativa	0.0	868	1002	47.70
PP00070G01260	Physcomitrella patens	0.0	867	1014	48.03
PP00112G00240	Physcomitrella patens	0.0	853	1019	47.01
AT5G15070	Arabidopsis thaliana	0.0	848	1061	44.67
AC00G52180	Asterochloris sp. Cgr-DA1pho v2.0	0.0	842	1013	46.30
AT3G01310	Arabidopsis thaliana	0.0	843	1017	46.41
MP05G03560	Micromonas pusilla strain CCMP1545	0.0	842	661	64.75
CNC64A_005G01870	Chlorella sp NC64A	0.0	825	1114	43.27
OS01G56980	Oryza sativa	0.0	823	1031	45.39
phs362880	Phytophtora sojae	0.0	664	1110	39.19
PI00G33720	Picochlorum sp. SENEW3 (SE3)	0.0	657	656	52.74
ENSG00000145725	Homo sapiens	0.0	655	1007	40.81
RCC4223.09g01180	Picochlorum_RCC4223	0.0	649	660	52.12
FBgn0027279	Drosophila melanogaster	0.0	664	1003	40.68
CV00G92490	Coccomyxa subellipsoidea C-169	0.0	632	672	50.00
TP02G08430	Thalassiosira pseudonana	0.0	597	1005	39.20
WBGene00018508	Caenorhabditis elegans	0.0	608	1019	39.16
BPRRCC1105_09G03180	Bathycoccus prasinos	0.0	593	470	64.89
emh483710	Emiliania huxleyi	0.0	574	1026	36.16
FC005G10040	Fragilariopsis cylindrus	3e-166	519	809	39.43
CR03G09710	Chlamydomonas reinhardtii	4e-163	530	708	44.35
pte664940	Paramecium tetraurelia	6e-162	514	870	38.28
pte599340	Paramecium tetraurelia	1e-160	511	879	37.88
VC00G146720	Volvox carteri	6e-159	519	525	50.86
emh565740	Emiliania huxleyi	2e-146	464	753	40.77
AA0014G02190	Aureococcus anophagefferens	1e-141	452	656	41.16
HE0000G10040	Helicosporidium sp.	2e-137	431	471	49.47
emh92080	Emiliania huxleyi	6e-131	423	637	41.60
SPCC1672.06c	Schizosaccharomyces pombe	5e-125	412	1029	32.36
emh375850	Emiliania huxleyi	9e-119	390	528	45.08
CR01G11320	Chlamydomonas reinhardtii	1e-113	396	336	56.25
phs223530	Phytophtora sojae	7e-98	339	282	58.16
VC00G13030	Volvox carteri	1e-97	348	410	46.59
emh739850	Emiliania huxleyi	2e-92	324	412	43.69
ES0425G00030	Ectocarpus siliculosus	1e-90	323	462	40.04
PTI_11G00860	Phaeodactylum tricornutum	7e-89	317	373	44.50
gsu105930	Galdieria sulphuraria	3e-81	276	345	43.19
DDB_G0284617	Dictyostelium discoideum	4e-78	270	329	42.55
CM09G02100	Cyanidioschyzon merolae	7e-76	259	328	43.90
CM09G02370	Cyanidioschyzon merolae	9e-76	258	341	43.40
AP00G16430	Auxenochlorella protothecoides	2e-66	244	354	44.63
ccr179200	Chondrus crispus	5e-50	185	315	38.73
Naga_101571g1	Nannochloropsis gaditana	2e-31	129	139	44.60
OS01G56960	Oryza sativa	2e-20	98.2	183	36.07
HE0000G36530	Helicosporidium sp.	2e-18	90.9	140	37.14
emh07790	Emiliania huxleyi	2e-17	87.4	107	42.99
FC005G10050	Fragilariopsis cylindrus	1e-15	83.6	95	48.42

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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