|
CNC64A_078G00040 |
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]Code Context echo "<td><input type='checkbox' name='selected_genes[]' value='".$similarity_hit['gene_id']."' ".$checked." /></td>\n";
echo "<td>".$this->Html->link($similarity_hit_gene,array("controller"=>"genes","action"=>"view",$similarity_hit_gene),array("target"=>"_blank"))."</td>\n";
echo "<td>".$this->Html->link($similarity_hit['common_name'],array("controller"=>"organism","action"=>"view",urlencode($similarity_hit['common_name'])))."</td>\n";
$viewFile = '/xtras/group/biocomp/plaza/versions/plaza_pico_03/app/View/Analysis/custom_tree_creation.ctp'
$dataForView = array(
'allowed_extra_sequences_types' => array(
'aa' => 'Protein',
'dna' => 'DNA'
),
'allowed_editing_methods' => array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
),
'allowed_tree_programs' => array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
),
'allowed_msa_programs' => array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
),
'allowed_number_blasthits' => array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
),
'similarity_hits_genes' => array(
'ENSMUSG00000056962' => array(
'gene_id' => 'ENSMUSG00000056962',
'e_value' => '0.0',
'bit_score' => '839',
'alignment_length' => '404',
'identity_percentage' => '100.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000070495' => array(
'gene_id' => 'ENSG00000070495',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '403',
'identity_percentage' => '97.77',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00004205' => array(
'gene_id' => 'WBGene00004205',
'e_value' => '5e-129',
'bit_score' => '385',
'alignment_length' => '320',
'identity_percentage' => '56.25',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'CV00G00580' => array(
'gene_id' => 'CV00G00580',
'e_value' => '1e-109',
'bit_score' => '332',
'alignment_length' => '282',
'identity_percentage' => '54.61',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CR09G08380' => array(
'gene_id' => 'CR09G08380',
'e_value' => '3e-109',
'bit_score' => '343',
'alignment_length' => '340',
'identity_percentage' => '47.35',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'MP17G02470' => array(
'gene_id' => 'MP17G02470',
'e_value' => '5e-109',
'bit_score' => '338',
'alignment_length' => '336',
'identity_percentage' => '47.92',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_03G08300' => array(
'gene_id' => 'MRCC299_03G08300',
'e_value' => '2e-108',
'bit_score' => '330',
'alignment_length' => '335',
'identity_percentage' => '47.76',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'phs162110' => array(
'gene_id' => 'phs162110',
'e_value' => '4e-104',
'bit_score' => '322',
'alignment_length' => '332',
'identity_percentage' => '44.58',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'OT_18G01700' => array(
'gene_id' => 'OT_18G01700',
'e_value' => '3e-100',
'bit_score' => '312',
'alignment_length' => '350',
'identity_percentage' => '44.57',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OM_18G00390' => array(
'gene_id' => 'OM_18G00390',
'e_value' => '7e-99',
'bit_score' => '308',
'alignment_length' => '340',
'identity_percentage' => '45.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_17G01750' => array(
'gene_id' => 'ORCC809_17G01750',
'e_value' => '1e-97',
'bit_score' => '305',
'alignment_length' => '343',
'identity_percentage' => '46.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'ES0055G00320' => array(
'gene_id' => 'ES0055G00320',
'e_value' => '3e-97',
'bit_score' => '305',
'alignment_length' => '350',
'identity_percentage' => '45.14',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'OL17G01710' => array(
'gene_id' => 'OL17G01710',
'e_value' => '3e-97',
'bit_score' => '304',
'alignment_length' => '427',
'identity_percentage' => '41.22',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100080g27' => array(
'gene_id' => 'Naga_100080g27',
'e_value' => '3e-95',
'bit_score' => '298',
'alignment_length' => '345',
'identity_percentage' => '44.93',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'AC00G05760' => array(
'gene_id' => 'AC00G05760',
'e_value' => '4e-94',
'bit_score' => '305',
'alignment_length' => '329',
'identity_percentage' => '45.90',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'AP00G60980' => array(
'gene_id' => 'AP00G60980',
'e_value' => '7e-93',
'bit_score' => '297',
'alignment_length' => '324',
'identity_percentage' => '45.37',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.04g03000' => array(
'gene_id' => 'RCC4223.04g03000',
'e_value' => '8e-92',
'bit_score' => '289',
'alignment_length' => '331',
'identity_percentage' => '44.71',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PTI_12G01940' => array(
'gene_id' => 'PTI_12G01940',
'e_value' => '2e-85',
'bit_score' => '273',
'alignment_length' => '355',
'identity_percentage' => '42.25',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'PI00G69060' => array(
'gene_id' => 'PI00G69060',
'e_value' => '7e-85',
'bit_score' => '271',
'alignment_length' => '333',
'identity_percentage' => '43.24',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_18G00070' => array(
'gene_id' => 'BPRRCC1105_18G00070',
'e_value' => '4e-79',
'bit_score' => '258',
'alignment_length' => '340',
'identity_percentage' => '39.71',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'pte586860' => array(
'gene_id' => 'pte586860',
'e_value' => '3e-75',
'bit_score' => '246',
'alignment_length' => '345',
'identity_percentage' => '36.52',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'FC023G02380' => array(
'gene_id' => 'FC023G02380',
'e_value' => '6e-75',
'bit_score' => '246',
'alignment_length' => '369',
'identity_percentage' => '37.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'pte446820' => array(
'gene_id' => 'pte446820',
'e_value' => '5e-74',
'bit_score' => '243',
'alignment_length' => '363',
'identity_percentage' => '38.02',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'AA0007G00410' => array(
'gene_id' => 'AA0007G00410',
'e_value' => '2e-73',
'bit_score' => '238',
'alignment_length' => '293',
'identity_percentage' => '42.66',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'pte131250' => array(
'gene_id' => 'pte131250',
'e_value' => '2e-73',
'bit_score' => '241',
'alignment_length' => '363',
'identity_percentage' => '36.91',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0270006' => array(
'gene_id' => 'DDB_G0270006',
'e_value' => '2e-63',
'bit_score' => '224',
'alignment_length' => '253',
'identity_percentage' => '43.87',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'VC00G06870' => array(
'gene_id' => 'VC00G06870',
'e_value' => '4e-56',
'bit_score' => '205',
'alignment_length' => '276',
'identity_percentage' => '40.58',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'phs158060' => array(
'gene_id' => 'phs158060',
'e_value' => '2e-55',
'bit_score' => '197',
'alignment_length' => '299',
'identity_percentage' => '36.45',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'PP00153G00450' => array(
'gene_id' => 'PP00153G00450',
'e_value' => '2e-55',
'bit_score' => '202',
'alignment_length' => '249',
'identity_percentage' => '42.17',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CV00G18180' => array(
'gene_id' => 'CV00G18180',
'e_value' => '7e-55',
'bit_score' => '192',
'alignment_length' => '255',
'identity_percentage' => '40.39',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'pte622540' => array(
'gene_id' => 'pte622540',
'e_value' => '4e-54',
'bit_score' => '189',
'alignment_length' => '299',
'identity_percentage' => '35.12',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'OS03G27250' => array(
'gene_id' => 'OS03G27250',
'e_value' => '5e-54',
'bit_score' => '197',
'alignment_length' => '254',
'identity_percentage' => '42.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'emh378350' => array(
'gene_id' => 'emh378350',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh368000' => array(
'gene_id' => 'emh368000',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'PP00080G00470' => array(
'gene_id' => 'PP00080G00470',
'e_value' => '4e-53',
'bit_score' => '195',
'alignment_length' => '249',
'identity_percentage' => '40.96',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00038G02410' => array(
'gene_id' => 'ATR_00038G02410',
'e_value' => '6e-53',
'bit_score' => '195',
'alignment_length' => '265',
'identity_percentage' => '41.51',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00004G01530' => array(
'gene_id' => 'ATR_00004G01530',
'e_value' => '8e-53',
'bit_score' => '189',
'alignment_length' => '252',
'identity_percentage' => '41.27',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'ES0131G00480' => array(
'gene_id' => 'ES0131G00480',
'e_value' => '2e-52',
'bit_score' => '189',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_06G05010' => array(
'gene_id' => 'ORCC809_06G05010',
'e_value' => '3e-52',
'bit_score' => '184',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'AT1G78280' => array(
'gene_id' => 'AT1G78280',
'e_value' => '4e-52',
'bit_score' => '192',
'alignment_length' => '338',
'identity_percentage' => '35.80',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_008G00750' => array(
'gene_id' => 'CNC64A_008G00750',
'e_value' => '2e-51',
'bit_score' => '191',
'alignment_length' => '251',
'identity_percentage' => '40.64',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'OM_09G04140' => array(
'gene_id' => 'OM_09G04140',
'e_value' => '8e-51',
'bit_score' => '183',
'alignment_length' => '245',
'identity_percentage' => '40.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'PTI_09G01280' => array(
'gene_id' => 'PTI_09G01280',
'e_value' => '5e-50',
'bit_score' => '180',
'alignment_length' => '267',
'identity_percentage' => '37.83',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'AT5G06550' => array(
'gene_id' => 'AT5G06550',
'e_value' => '7e-50',
'bit_score' => '181',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ccr164880' => array(
'gene_id' => 'ccr164880',
'e_value' => '8e-50',
'bit_score' => '181',
'alignment_length' => '253',
'identity_percentage' => '38.34',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'PP00156G00920' => array(
'gene_id' => 'PP00156G00920',
'e_value' => '1e-49',
'bit_score' => '182',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OL03G03880' => array(
'gene_id' => 'OL03G03880',
'e_value' => '7e-49',
'bit_score' => '174',
'alignment_length' => '246',
'identity_percentage' => '39.84',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'OS11G36450' => array(
'gene_id' => 'OS11G36450',
'e_value' => '7e-49',
'bit_score' => '179',
'alignment_length' => '242',
'identity_percentage' => '38.02',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'VC00G136510' => array(
'gene_id' => 'VC00G136510',
'e_value' => '4e-48',
'bit_score' => '178',
'alignment_length' => '299',
'identity_percentage' => '32.44',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CR07G03790' => array(
'gene_id' => 'CR07G03790',
'e_value' => '7e-47',
'bit_score' => '178',
'alignment_length' => '250',
'identity_percentage' => '37.60',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OT_03G03930' => array(
'gene_id' => 'OT_03G03930',
'e_value' => '2e-46',
'bit_score' => '171',
'alignment_length' => '247',
'identity_percentage' => '39.68',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'CR12G02740' => array(
'gene_id' => 'CR12G02740',
'e_value' => '1e-45',
'bit_score' => '172',
'alignment_length' => '253',
'identity_percentage' => '36.76',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'PI00G67060' => array(
'gene_id' => 'PI00G67060',
'e_value' => '3e-45',
'bit_score' => '168',
'alignment_length' => '253',
'identity_percentage' => '35.57',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.05g04450' => array(
'gene_id' => 'RCC4223.05g04450',
'e_value' => '7e-45',
'bit_score' => '167',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'AC00G44220' => array(
'gene_id' => 'AC00G44220',
'e_value' => '5e-44',
'bit_score' => '164',
'alignment_length' => '284',
'identity_percentage' => '34.86',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'phs346580' => array(
'gene_id' => 'phs346580',
'e_value' => '2e-43',
'bit_score' => '167',
'alignment_length' => '289',
'identity_percentage' => '35.29',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'AP00G18540' => array(
'gene_id' => 'AP00G18540',
'e_value' => '2e-42',
'bit_score' => '159',
'alignment_length' => '252',
'identity_percentage' => '34.52',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'MP16G00710' => array(
'gene_id' => 'MP16G00710',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '325',
'identity_percentage' => '31.08',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'gsu12560' => array(
'gene_id' => 'gsu12560',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '261',
'identity_percentage' => '33.72',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G21000' => array(
'gene_id' => 'HE0000G21000',
'e_value' => '4e-36',
'bit_score' => '142',
'alignment_length' => '246',
'identity_percentage' => '34.96',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'PTI_09G03240' => array(
'gene_id' => 'PTI_09G03240',
'e_value' => '1e-34',
'bit_score' => '138',
'alignment_length' => '273',
'identity_percentage' => '32.97',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'ES0189G00200' => array(
'gene_id' => 'ES0189G00200',
'e_value' => '6e-34',
'bit_score' => '131',
'alignment_length' => '172',
'identity_percentage' => '38.95',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'AA0009G01720' => array(
'gene_id' => 'AA0009G01720',
'e_value' => '6e-34',
'bit_score' => '136',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'emh532560' => array(
'gene_id' => 'emh532560',
'e_value' => '4e-33',
'bit_score' => '136',
'alignment_length' => '289',
'identity_percentage' => '31.49',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'TP09G02710' => array(
'gene_id' => 'TP09G02710',
'e_value' => '3e-32',
'bit_score' => '130',
'alignment_length' => '285',
'identity_percentage' => '29.82',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_002G01380' => array(
'gene_id' => 'CNC64A_002G01380',
'e_value' => '1e-31',
'bit_score' => '129',
'alignment_length' => '255',
'identity_percentage' => '32.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0280485' => array(
'gene_id' => 'DDB_G0280485',
'e_value' => '2e-30',
'bit_score' => '125',
'alignment_length' => '158',
'identity_percentage' => '41.77',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_09G04180' => array(
'gene_id' => 'BPRRCC1105_09G04180',
'e_value' => '4e-29',
'bit_score' => '123',
'alignment_length' => '273',
'identity_percentage' => '30.77',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'FC006G03570' => array(
'gene_id' => 'FC006G03570',
'e_value' => '4e-29',
'bit_score' => '122',
'alignment_length' => '388',
'identity_percentage' => '28.09',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_10G04840' => array(
'gene_id' => 'MRCC299_10G04840',
'e_value' => '5e-28',
'bit_score' => '119',
'alignment_length' => '182',
'identity_percentage' => '37.91',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'emh108900' => array(
'gene_id' => 'emh108900',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh524880' => array(
'gene_id' => 'emh524880',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh488700' => array(
'gene_id' => 'emh488700',
'e_value' => '8e-28',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '28.27',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh104150' => array(
'gene_id' => 'emh104150',
'e_value' => '1e-27',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '27.38',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'CV00G08220' => array(
'gene_id' => 'CV00G08220',
'e_value' => '6e-23',
'bit_score' => '104',
'alignment_length' => '183',
'identity_percentage' => '33.33',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_032G00510' => array(
'gene_id' => 'CNC64A_032G00510',
'e_value' => '1e-21',
'bit_score' => '94.4',
'alignment_length' => '64',
'identity_percentage' => '59.38',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_06G03390' => array(
'gene_id' => 'MRCC299_06G03390',
'e_value' => '3e-21',
'bit_score' => '99.0',
'alignment_length' => '305',
'identity_percentage' => '27.21',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'ES0055G00400' => array(
'gene_id' => 'ES0055G00400',
'e_value' => '3e-21',
'bit_score' => '98.6',
'alignment_length' => '291',
'identity_percentage' => '29.90',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'AA0021G00550' => array(
'gene_id' => 'AA0021G00550',
'e_value' => '1e-19',
'bit_score' => '92.8',
'alignment_length' => '174',
'identity_percentage' => '36.21',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'AT5G63080' => array(
'gene_id' => 'AT5G63080',
'e_value' => '1e-19',
'bit_score' => '94.4',
'alignment_length' => '284',
'identity_percentage' => '28.87',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'FC005G08020' => array(
'gene_id' => 'FC005G08020',
'e_value' => '1e-18',
'bit_score' => '90.9',
'alignment_length' => '227',
'identity_percentage' => '29.07',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_078G00040' => array(
'gene_id' => 'CNC64A_078G00040',
'e_value' => '3e-17',
'bit_score' => '85.9',
'alignment_length' => '294',
'identity_percentage' => '24.83',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000081692' => array(
'gene_id' => 'ENSG00000081692',
'e_value' => '4e-17',
'bit_score' => '86.7',
'alignment_length' => '270',
'identity_percentage' => '30.37',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00085G00270' => array(
'gene_id' => 'ATR_00085G00270',
'e_value' => '8e-16',
'bit_score' => '83.2',
'alignment_length' => '305',
'identity_percentage' => '25.90',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'phs101420' => array(
'gene_id' => 'phs101420',
'e_value' => '1e-15',
'bit_score' => '80.9',
'alignment_length' => '269',
'identity_percentage' => '27.51',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'emh633060' => array(
'gene_id' => 'emh633060',
'e_value' => '2e-15',
'bit_score' => '82.0',
'alignment_length' => '122',
'identity_percentage' => '38.52',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh275070' => array(
'gene_id' => 'emh275070',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh530600' => array(
'gene_id' => 'emh530600',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'AP00G22010' => array(
'gene_id' => 'AP00G22010',
'e_value' => '2e-14',
'bit_score' => '78.6',
'alignment_length' => '308',
'identity_percentage' => '24.35',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'emh547740' => array(
'gene_id' => 'emh547740',
'e_value' => '3e-14',
'bit_score' => '78.6',
'alignment_length' => '226',
'identity_percentage' => '27.43',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0032671' => array(
'gene_id' => 'FBgn0032671',
'e_value' => '4e-14',
'bit_score' => '77.4',
'alignment_length' => '155',
'identity_percentage' => '31.61',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'MP10G01350' => array(
'gene_id' => 'MP10G01350',
'e_value' => '5e-13',
'bit_score' => '73.9',
'alignment_length' => '283',
'identity_percentage' => '22.97',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.07g01600' => array(
'gene_id' => 'RCC4223.07g01600',
'e_value' => '7e-13',
'bit_score' => '73.2',
'alignment_length' => '292',
'identity_percentage' => '21.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PTI_02G03790' => array(
'gene_id' => 'PTI_02G03790',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '289',
'identity_percentage' => '22.84',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'FC001G12710' => array(
'gene_id' => 'FC001G12710',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '168',
'identity_percentage' => '26.79',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_078G00010' => array(
'gene_id' => 'CNC64A_078G00010',
'e_value' => '1e-12',
'bit_score' => '72.0',
'alignment_length' => '293',
'identity_percentage' => '22.18',
'gf' => array(
[maximum depth reached]
)
),
'MP17G01870' => array(
'gene_id' => 'MP17G01870',
'e_value' => '3e-12',
'bit_score' => '72.4',
'alignment_length' => '292',
'identity_percentage' => '26.03',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ES0189G00080' => array(
'gene_id' => 'ES0189G00080',
'e_value' => '6e-12',
'bit_score' => '70.9',
'alignment_length' => '152',
'identity_percentage' => '34.87',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'emh547640' => array(
'gene_id' => 'emh547640',
'e_value' => '1e-11',
'bit_score' => '70.5',
'alignment_length' => '130',
'identity_percentage' => '38.46',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'OS01G36630' => array(
'gene_id' => 'OS01G36630',
'e_value' => '2e-11',
'bit_score' => '68.9',
'alignment_length' => '167',
'identity_percentage' => '28.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'ES0111G00300' => array(
'gene_id' => 'ES0111G00300',
'e_value' => '4e-11',
'bit_score' => '68.2',
'alignment_length' => '173',
'identity_percentage' => '32.37',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_03G07730' => array(
'gene_id' => 'MRCC299_03G07730',
'e_value' => '6e-11',
'bit_score' => '68.6',
'alignment_length' => '284',
'identity_percentage' => '25.70',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'MP05G05820' => array(
'gene_id' => 'MP05G05820',
'e_value' => '6e-11',
'bit_score' => '67.8',
'alignment_length' => '311',
'identity_percentage' => '22.19',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'TP02G05220' => array(
'gene_id' => 'TP02G05220',
'e_value' => '4e-10',
'bit_score' => '64.7',
'alignment_length' => '257',
'identity_percentage' => '25.29',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'CV00G22320' => array(
'gene_id' => 'CV00G22320',
'e_value' => '4e-10',
'bit_score' => '65.1',
'alignment_length' => '263',
'identity_percentage' => '23.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CV00G25650' => array(
'gene_id' => 'CV00G25650',
'e_value' => '5e-10',
'bit_score' => '65.5',
'alignment_length' => '311',
'identity_percentage' => '23.15',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'emh445260' => array(
'gene_id' => 'emh445260',
'e_value' => '7e-10',
'bit_score' => '63.9',
'alignment_length' => '237',
'identity_percentage' => '25.74',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'SPAC25H1.02' => array(
'gene_id' => 'SPAC25H1.02',
'e_value' => '1e-09',
'bit_score' => '63.9',
'alignment_length' => '156',
'identity_percentage' => '28.21',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_024G00200' => array(
'gene_id' => 'CNC64A_024G00200',
'e_value' => '1e-09',
'bit_score' => '62.0',
'alignment_length' => '159',
'identity_percentage' => '27.67',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'emh140980' => array(
'gene_id' => 'emh140980',
'e_value' => '2e-09',
'bit_score' => '62.8',
'alignment_length' => '240',
'identity_percentage' => '25.00',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_13G00700' => array(
'gene_id' => 'ORCC809_13G00700',
'e_value' => '1e-08',
'bit_score' => '60.8',
'alignment_length' => '284',
'identity_percentage' => '26.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'VC00G148220' => array(
'gene_id' => 'VC00G148220',
'e_value' => '4e-08',
'bit_score' => '58.2',
'alignment_length' => '171',
'identity_percentage' => '30.99',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G45250' => array(
'gene_id' => 'HE0000G45250',
'e_value' => '9e-08',
'bit_score' => '56.2',
'alignment_length' => '212',
'identity_percentage' => '24.53',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'OM_08G02020' => array(
'gene_id' => 'OM_08G02020',
'e_value' => '5e-07',
'bit_score' => '55.5',
'alignment_length' => '260',
'identity_percentage' => '25.77',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OM_02G04400' => array(
'gene_id' => 'OM_02G04400',
'e_value' => '8e-07',
'bit_score' => '54.3',
'alignment_length' => '256',
'identity_percentage' => '23.05',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00043156' => array(
'gene_id' => 'WBGene00043156',
'e_value' => '9e-07',
'bit_score' => '53.9',
'alignment_length' => '254',
'identity_percentage' => '24.02',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'OL13G02330' => array(
'gene_id' => 'OL13G02330',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'OL21G00670' => array(
'gene_id' => 'OL21G00670',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'AA0009G00660' => array(
'gene_id' => 'AA0009G00660',
'e_value' => '4e-06',
'bit_score' => '53.1',
'alignment_length' => '292',
'identity_percentage' => '23.29',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'emh768770' => array(
'gene_id' => 'emh768770',
'e_value' => '5e-06',
'bit_score' => '51.6',
'alignment_length' => '136',
'identity_percentage' => '28.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'OM_06G01440' => array(
'gene_id' => 'OM_06G01440',
'e_value' => '8e-06',
'bit_score' => '51.6',
'alignment_length' => '290',
'identity_percentage' => '23.79',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_05G02200' => array(
'gene_id' => 'MRCC299_05G02200',
'e_value' => '9e-06',
'bit_score' => '52.0',
'alignment_length' => '113',
'identity_percentage' => '26.55',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'PTI_14G01340' => array(
'gene_id' => 'PTI_14G01340',
'e_value' => '9e-06',
'bit_score' => '50.8',
'alignment_length' => '244',
'identity_percentage' => '26.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
)
),
'similarity_hits_species' => array(
'mus' => array(
(int) 0 => 'ENSMUSG00000056962'
),
'hom' => array(
(int) 0 => 'ENSG00000070495',
(int) 1 => 'ENSG00000081692'
),
'cel' => array(
(int) 0 => 'WBGene00004205',
(int) 1 => 'WBGene00043156'
),
'cvu' => array(
(int) 0 => 'CV00G00580',
(int) 1 => 'CV00G18180',
(int) 2 => 'CV00G08220',
(int) 3 => 'CV00G22320',
(int) 4 => 'CV00G25650'
),
'cre' => array(
(int) 0 => 'CR09G08380',
(int) 1 => 'CR07G03790',
(int) 2 => 'CR12G02740'
),
'mpu' => array(
(int) 0 => 'MP17G02470',
(int) 1 => 'MP16G00710',
(int) 2 => 'MP10G01350',
(int) 3 => 'MP17G01870',
(int) 4 => 'MP05G05820'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_03G08300',
(int) 1 => 'MRCC299_10G04840',
(int) 2 => 'MRCC299_06G03390',
(int) 3 => 'MRCC299_03G07730',
(int) 4 => 'MRCC299_05G02200'
),
'phs' => array(
(int) 0 => 'phs162110',
(int) 1 => 'phs158060',
(int) 2 => 'phs346580',
(int) 3 => 'phs101420'
),
'ota' => array(
(int) 0 => 'OT_18G01700',
(int) 1 => 'OT_03G03930'
),
'ome' => array(
(int) 0 => 'OM_18G00390',
(int) 1 => 'OM_09G04140',
(int) 2 => 'OM_08G02020',
(int) 3 => 'OM_02G04400',
(int) 4 => 'OM_06G01440'
),
'orcc809' => array(
(int) 0 => 'ORCC809_17G01750',
(int) 1 => 'ORCC809_06G05010',
(int) 2 => 'ORCC809_13G00700'
),
'esi' => array(
(int) 0 => 'ES0055G00320',
(int) 1 => 'ES0131G00480',
(int) 2 => 'ES0189G00200',
(int) 3 => 'ES0055G00400',
(int) 4 => 'ES0189G00080',
(int) 5 => 'ES0111G00300'
),
'olu' => array(
(int) 0 => 'OL17G01710',
(int) 1 => 'OL03G03880',
(int) 2 => 'OL13G02330',
(int) 3 => 'OL21G00670'
),
'nga' => array(
(int) 0 => 'Naga_100080g27'
),
'acg' => array(
(int) 0 => 'AC00G05760',
(int) 1 => 'AC00G44220'
),
'apr' => array(
(int) 0 => 'AP00G60980',
(int) 1 => 'AP00G18540',
(int) 2 => 'AP00G22010'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g03000',
(int) 1 => 'RCC4223.05g04450',
(int) 2 => 'RCC4223.07g01600'
),
'ptri' => array(
(int) 0 => 'PTI_12G01940',
(int) 1 => 'PTI_09G01280',
(int) 2 => 'PTI_09G03240',
(int) 3 => 'PTI_02G03790',
(int) 4 => 'PTI_14G01340'
),
'pse3' => array(
(int) 0 => 'PI00G69060',
(int) 1 => 'PI00G67060'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_18G00070',
(int) 1 => 'BPRRCC1105_09G04180'
),
'pte' => array(
(int) 0 => 'pte586860',
(int) 1 => 'pte446820',
(int) 2 => 'pte131250',
(int) 3 => 'pte622540'
),
'fcy' => array(
(int) 0 => 'FC023G02380',
(int) 1 => 'FC006G03570',
(int) 2 => 'FC005G08020',
(int) 3 => 'FC001G12710'
),
'aan' => array(
(int) 0 => 'AA0007G00410',
(int) 1 => 'AA0009G01720',
(int) 2 => 'AA0021G00550',
(int) 3 => 'AA0009G00660'
),
'ddi' => array(
(int) 0 => 'DDB_G0270006',
(int) 1 => 'DDB_G0280485'
),
'vca' => array(
(int) 0 => 'VC00G06870',
(int) 1 => 'VC00G136510',
(int) 2 => 'VC00G148220'
),
'ppa' => array(
(int) 0 => 'PP00153G00450',
(int) 1 => 'PP00080G00470',
(int) 2 => 'PP00156G00920'
),
'osa' => array(
(int) 0 => 'OS03G27250',
(int) 1 => 'OS11G36450',
(int) 2 => 'OS01G36630'
),
'emh' => array(
(int) 0 => 'emh378350',
(int) 1 => 'emh368000',
(int) 2 => 'emh532560',
(int) 3 => 'emh108900',
(int) 4 => 'emh524880',
(int) 5 => 'emh488700',
(int) 6 => 'emh104150',
(int) 7 => 'emh633060',
(int) 8 => 'emh275070',
(int) 9 => 'emh530600',
(int) 10 => 'emh547740',
(int) 11 => 'emh547640',
(int) 12 => 'emh445260',
(int) 13 => 'emh140980',
(int) 14 => 'emh768770'
),
'atr' => array(
(int) 0 => 'ATR_00038G02410',
(int) 1 => 'ATR_00004G01530',
(int) 2 => 'ATR_00085G00270'
),
'ath' => array(
(int) 0 => 'AT1G78280',
(int) 1 => 'AT5G06550',
(int) 2 => 'AT5G63080'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_008G00750',
(int) 1 => 'CNC64A_002G01380',
(int) 2 => 'CNC64A_032G00510',
(int) 3 => 'CNC64A_024G00200'
),
'ccr' => array(
(int) 0 => 'ccr164880'
),
'gsu' => array(
(int) 0 => 'gsu12560'
),
'hsp' => array(
(int) 0 => 'HE0000G21000',
(int) 1 => 'HE0000G45250'
),
'tps' => array(
(int) 0 => 'TP09G02710',
(int) 1 => 'TP02G05220'
),
'drm' => array(
(int) 0 => 'FBgn0032671'
),
'scp' => array(
(int) 0 => 'SPAC25H1.02'
)
),
'gene_id' => 'ENSMUSG00000056962',
'all_species_index' => array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'all_species' => array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'gene_family_types_information' => array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
),
'gene_family_types_configuration' => array(),
'data_identifier' => 'ENSMUSG00000056962',
'data_type' => 'gene_id',
'allow_async_use' => true,
'gene_placeholder' => 'PTI_10G00280',
'gf_placeholder' => 'HOM03P007710',
'title_for_layout' => 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
)
$allowed_extra_sequences_types = array(
'aa' => 'Protein',
'dna' => 'DNA'
)
$allowed_editing_methods = array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
)
$allowed_tree_programs = array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
)
$similarity_hits_genes = array(
'ENSMUSG00000056962' => array(
'gene_id' => 'ENSMUSG00000056962',
'e_value' => '0.0',
'bit_score' => '839',
'alignment_length' => '404',
'identity_percentage' => '100.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ENSG00000070495' => array(
'gene_id' => 'ENSG00000070495',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '403',
'identity_percentage' => '97.77',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'WBGene00004205' => array(
'gene_id' => 'WBGene00004205',
'e_value' => '5e-129',
'bit_score' => '385',
'alignment_length' => '320',
'identity_percentage' => '56.25',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'CV00G00580' => array(
'gene_id' => 'CV00G00580',
'e_value' => '1e-109',
'bit_score' => '332',
'alignment_length' => '282',
'identity_percentage' => '54.61',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'CR09G08380' => array(
'gene_id' => 'CR09G08380',
'e_value' => '3e-109',
'bit_score' => '343',
'alignment_length' => '340',
'identity_percentage' => '47.35',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'MP17G02470' => array(
'gene_id' => 'MP17G02470',
'e_value' => '5e-109',
'bit_score' => '338',
'alignment_length' => '336',
'identity_percentage' => '47.92',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'MRCC299_03G08300' => array(
'gene_id' => 'MRCC299_03G08300',
'e_value' => '2e-108',
'bit_score' => '330',
'alignment_length' => '335',
'identity_percentage' => '47.76',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'phs162110' => array(
'gene_id' => 'phs162110',
'e_value' => '4e-104',
'bit_score' => '322',
'alignment_length' => '332',
'identity_percentage' => '44.58',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OT_18G01700' => array(
'gene_id' => 'OT_18G01700',
'e_value' => '3e-100',
'bit_score' => '312',
'alignment_length' => '350',
'identity_percentage' => '44.57',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OM_18G00390' => array(
'gene_id' => 'OM_18G00390',
'e_value' => '7e-99',
'bit_score' => '308',
'alignment_length' => '340',
'identity_percentage' => '45.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ORCC809_17G01750' => array(
'gene_id' => 'ORCC809_17G01750',
'e_value' => '1e-97',
'bit_score' => '305',
'alignment_length' => '343',
'identity_percentage' => '46.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ES0055G00320' => array(
'gene_id' => 'ES0055G00320',
'e_value' => '3e-97',
'bit_score' => '305',
'alignment_length' => '350',
'identity_percentage' => '45.14',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OL17G01710' => array(
'gene_id' => 'OL17G01710',
'e_value' => '3e-97',
'bit_score' => '304',
'alignment_length' => '427',
'identity_percentage' => '41.22',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'Naga_100080g27' => array(
'gene_id' => 'Naga_100080g27',
'e_value' => '3e-95',
'bit_score' => '298',
'alignment_length' => '345',
'identity_percentage' => '44.93',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AC00G05760' => array(
'gene_id' => 'AC00G05760',
'e_value' => '4e-94',
'bit_score' => '305',
'alignment_length' => '329',
'identity_percentage' => '45.90',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AP00G60980' => array(
'gene_id' => 'AP00G60980',
'e_value' => '7e-93',
'bit_score' => '297',
'alignment_length' => '324',
'identity_percentage' => '45.37',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'RCC4223.04g03000' => array(
'gene_id' => 'RCC4223.04g03000',
'e_value' => '8e-92',
'bit_score' => '289',
'alignment_length' => '331',
'identity_percentage' => '44.71',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PTI_12G01940' => array(
'gene_id' => 'PTI_12G01940',
'e_value' => '2e-85',
'bit_score' => '273',
'alignment_length' => '355',
'identity_percentage' => '42.25',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PI00G69060' => array(
'gene_id' => 'PI00G69060',
'e_value' => '7e-85',
'bit_score' => '271',
'alignment_length' => '333',
'identity_percentage' => '43.24',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'BPRRCC1105_18G00070' => array(
'gene_id' => 'BPRRCC1105_18G00070',
'e_value' => '4e-79',
'bit_score' => '258',
'alignment_length' => '340',
'identity_percentage' => '39.71',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte586860' => array(
'gene_id' => 'pte586860',
'e_value' => '3e-75',
'bit_score' => '246',
'alignment_length' => '345',
'identity_percentage' => '36.52',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'FC023G02380' => array(
'gene_id' => 'FC023G02380',
'e_value' => '6e-75',
'bit_score' => '246',
'alignment_length' => '369',
'identity_percentage' => '37.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte446820' => array(
'gene_id' => 'pte446820',
'e_value' => '5e-74',
'bit_score' => '243',
'alignment_length' => '363',
'identity_percentage' => '38.02',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AA0007G00410' => array(
'gene_id' => 'AA0007G00410',
'e_value' => '2e-73',
'bit_score' => '238',
'alignment_length' => '293',
'identity_percentage' => '42.66',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte131250' => array(
'gene_id' => 'pte131250',
'e_value' => '2e-73',
'bit_score' => '241',
'alignment_length' => '363',
'identity_percentage' => '36.91',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'DDB_G0270006' => array(
'gene_id' => 'DDB_G0270006',
'e_value' => '2e-63',
'bit_score' => '224',
'alignment_length' => '253',
'identity_percentage' => '43.87',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'VC00G06870' => array(
'gene_id' => 'VC00G06870',
'e_value' => '4e-56',
'bit_score' => '205',
'alignment_length' => '276',
'identity_percentage' => '40.58',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'phs158060' => array(
'gene_id' => 'phs158060',
'e_value' => '2e-55',
'bit_score' => '197',
'alignment_length' => '299',
'identity_percentage' => '36.45',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PP00153G00450' => array(
'gene_id' => 'PP00153G00450',
'e_value' => '2e-55',
'bit_score' => '202',
'alignment_length' => '249',
'identity_percentage' => '42.17',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'CV00G18180' => array(
'gene_id' => 'CV00G18180',
'e_value' => '7e-55',
'bit_score' => '192',
'alignment_length' => '255',
'identity_percentage' => '40.39',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'pte622540' => array(
'gene_id' => 'pte622540',
'e_value' => '4e-54',
'bit_score' => '189',
'alignment_length' => '299',
'identity_percentage' => '35.12',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'OS03G27250' => array(
'gene_id' => 'OS03G27250',
'e_value' => '5e-54',
'bit_score' => '197',
'alignment_length' => '254',
'identity_percentage' => '42.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'emh378350' => array(
'gene_id' => 'emh378350',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'emh368000' => array(
'gene_id' => 'emh368000',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PP00080G00470' => array(
'gene_id' => 'PP00080G00470',
'e_value' => '4e-53',
'bit_score' => '195',
'alignment_length' => '249',
'identity_percentage' => '40.96',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'ATR_00038G02410' => array(
'gene_id' => 'ATR_00038G02410',
'e_value' => '6e-53',
'bit_score' => '195',
'alignment_length' => '265',
'identity_percentage' => '41.51',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'ATR_00004G01530' => array(
'gene_id' => 'ATR_00004G01530',
'e_value' => '8e-53',
'bit_score' => '189',
'alignment_length' => '252',
'identity_percentage' => '41.27',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ES0131G00480' => array(
'gene_id' => 'ES0131G00480',
'e_value' => '2e-52',
'bit_score' => '189',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ORCC809_06G05010' => array(
'gene_id' => 'ORCC809_06G05010',
'e_value' => '3e-52',
'bit_score' => '184',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'AT1G78280' => array(
'gene_id' => 'AT1G78280',
'e_value' => '4e-52',
'bit_score' => '192',
'alignment_length' => '338',
'identity_percentage' => '35.80',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'CNC64A_008G00750' => array(
'gene_id' => 'CNC64A_008G00750',
'e_value' => '2e-51',
'bit_score' => '191',
'alignment_length' => '251',
'identity_percentage' => '40.64',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OM_09G04140' => array(
'gene_id' => 'OM_09G04140',
'e_value' => '8e-51',
'bit_score' => '183',
'alignment_length' => '245',
'identity_percentage' => '40.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PTI_09G01280' => array(
'gene_id' => 'PTI_09G01280',
'e_value' => '5e-50',
'bit_score' => '180',
'alignment_length' => '267',
'identity_percentage' => '37.83',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P163203'
)
),
'AT5G06550' => array(
'gene_id' => 'AT5G06550',
'e_value' => '7e-50',
'bit_score' => '181',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ccr164880' => array(
'gene_id' => 'ccr164880',
'e_value' => '8e-50',
'bit_score' => '181',
'alignment_length' => '253',
'identity_percentage' => '38.34',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PP00156G00920' => array(
'gene_id' => 'PP00156G00920',
'e_value' => '1e-49',
'bit_score' => '182',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'OL03G03880' => array(
'gene_id' => 'OL03G03880',
'e_value' => '7e-49',
'bit_score' => '174',
'alignment_length' => '246',
'identity_percentage' => '39.84',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'OS11G36450' => array(
'gene_id' => 'OS11G36450',
'e_value' => '7e-49',
'bit_score' => '179',
'alignment_length' => '242',
'identity_percentage' => '38.02',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'VC00G136510' => array(
'gene_id' => 'VC00G136510',
'e_value' => '4e-48',
'bit_score' => '178',
'alignment_length' => '299',
'identity_percentage' => '32.44',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CR07G03790' => array(
'gene_id' => 'CR07G03790',
'e_value' => '7e-47',
'bit_score' => '178',
'alignment_length' => '250',
'identity_percentage' => '37.60',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P099027'
)
),
'OT_03G03930' => array(
'gene_id' => 'OT_03G03930',
'e_value' => '2e-46',
'bit_score' => '171',
'alignment_length' => '247',
'identity_percentage' => '39.68',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CR12G02740' => array(
'gene_id' => 'CR12G02740',
'e_value' => '1e-45',
'bit_score' => '172',
'alignment_length' => '253',
'identity_percentage' => '36.76',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PI00G67060' => array(
'gene_id' => 'PI00G67060',
'e_value' => '3e-45',
'bit_score' => '168',
'alignment_length' => '253',
'identity_percentage' => '35.57',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'RCC4223.05g04450' => array(
'gene_id' => 'RCC4223.05g04450',
'e_value' => '7e-45',
'bit_score' => '167',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'AC00G44220' => array(
'gene_id' => 'AC00G44220',
'e_value' => '5e-44',
'bit_score' => '164',
'alignment_length' => '284',
'identity_percentage' => '34.86',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'phs346580' => array(
'gene_id' => 'phs346580',
'e_value' => '2e-43',
'bit_score' => '167',
'alignment_length' => '289',
'identity_percentage' => '35.29',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P205695'
)
),
'AP00G18540' => array(
'gene_id' => 'AP00G18540',
'e_value' => '2e-42',
'bit_score' => '159',
'alignment_length' => '252',
'identity_percentage' => '34.52',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'MP16G00710' => array(
'gene_id' => 'MP16G00710',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '325',
'identity_percentage' => '31.08',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'gsu12560' => array(
'gene_id' => 'gsu12560',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '261',
'identity_percentage' => '33.72',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'HE0000G21000' => array(
'gene_id' => 'HE0000G21000',
'e_value' => '4e-36',
'bit_score' => '142',
'alignment_length' => '246',
'identity_percentage' => '34.96',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PTI_09G03240' => array(
'gene_id' => 'PTI_09G03240',
'e_value' => '1e-34',
'bit_score' => '138',
'alignment_length' => '273',
'identity_percentage' => '32.97',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ES0189G00200' => array(
'gene_id' => 'ES0189G00200',
'e_value' => '6e-34',
'bit_score' => '131',
'alignment_length' => '172',
'identity_percentage' => '38.95',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P173302'
)
),
'AA0009G01720' => array(
'gene_id' => 'AA0009G01720',
'e_value' => '6e-34',
'bit_score' => '136',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh532560' => array(
'gene_id' => 'emh532560',
'e_value' => '4e-33',
'bit_score' => '136',
'alignment_length' => '289',
'identity_percentage' => '31.49',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P154983'
)
),
'TP09G02710' => array(
'gene_id' => 'TP09G02710',
'e_value' => '3e-32',
'bit_score' => '130',
'alignment_length' => '285',
'identity_percentage' => '29.82',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CNC64A_002G01380' => array(
'gene_id' => 'CNC64A_002G01380',
'e_value' => '1e-31',
'bit_score' => '129',
'alignment_length' => '255',
'identity_percentage' => '32.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'DDB_G0280485' => array(
'gene_id' => 'DDB_G0280485',
'e_value' => '2e-30',
'bit_score' => '125',
'alignment_length' => '158',
'identity_percentage' => '41.77',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'BPRRCC1105_09G04180' => array(
'gene_id' => 'BPRRCC1105_09G04180',
'e_value' => '4e-29',
'bit_score' => '123',
'alignment_length' => '273',
'identity_percentage' => '30.77',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'FC006G03570' => array(
'gene_id' => 'FC006G03570',
'e_value' => '4e-29',
'bit_score' => '122',
'alignment_length' => '388',
'identity_percentage' => '28.09',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'MRCC299_10G04840' => array(
'gene_id' => 'MRCC299_10G04840',
'e_value' => '5e-28',
'bit_score' => '119',
'alignment_length' => '182',
'identity_percentage' => '37.91',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh108900' => array(
'gene_id' => 'emh108900',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006216',
'ORTHOFAM' => 'ORTHO03P006027'
)
),
'emh524880' => array(
'gene_id' => 'emh524880',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006216',
'ORTHOFAM' => 'ORTHO03P006027'
)
),
'emh488700' => array(
'gene_id' => 'emh488700',
'e_value' => '8e-28',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '28.27',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh104150' => array(
'gene_id' => 'emh104150',
'e_value' => '1e-27',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '27.38',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CV00G08220' => array(
'gene_id' => 'CV00G08220',
'e_value' => '6e-23',
'bit_score' => '104',
'alignment_length' => '183',
'identity_percentage' => '33.33',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P143743'
)
),
'CNC64A_032G00510' => array(
'gene_id' => 'CNC64A_032G00510',
'e_value' => '1e-21',
'bit_score' => '94.4',
'alignment_length' => '64',
'identity_percentage' => '59.38',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P111202'
)
),
'MRCC299_06G03390' => array(
'gene_id' => 'MRCC299_06G03390',
'e_value' => '3e-21',
'bit_score' => '99.0',
'alignment_length' => '305',
'identity_percentage' => '27.21',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ES0055G00400' => array(
'gene_id' => 'ES0055G00400',
'e_value' => '3e-21',
'bit_score' => '98.6',
'alignment_length' => '291',
'identity_percentage' => '29.90',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'AA0021G00550' => array(
'gene_id' => 'AA0021G00550',
'e_value' => '1e-19',
'bit_score' => '92.8',
'alignment_length' => '174',
'identity_percentage' => '36.21',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'AT5G63080' => array(
'gene_id' => 'AT5G63080',
'e_value' => '1e-19',
'bit_score' => '94.4',
'alignment_length' => '284',
'identity_percentage' => '28.87',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'FC005G08020' => array(
'gene_id' => 'FC005G08020',
'e_value' => '1e-18',
'bit_score' => '90.9',
'alignment_length' => '227',
'identity_percentage' => '29.07',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'CNC64A_078G00040' => array(
'gene_id' => 'CNC64A_078G00040',
'e_value' => '3e-17',
'bit_score' => '85.9',
'alignment_length' => '294',
'identity_percentage' => '24.83',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ENSG00000081692' => array(
'gene_id' => 'ENSG00000081692',
'e_value' => '4e-17',
'bit_score' => '86.7',
'alignment_length' => '270',
'identity_percentage' => '30.37',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ATR_00085G00270' => array(
'gene_id' => 'ATR_00085G00270',
'e_value' => '8e-16',
'bit_score' => '83.2',
'alignment_length' => '305',
'identity_percentage' => '25.90',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'phs101420' => array(
'gene_id' => 'phs101420',
'e_value' => '1e-15',
'bit_score' => '80.9',
'alignment_length' => '269',
'identity_percentage' => '27.51',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh633060' => array(
'gene_id' => 'emh633060',
'e_value' => '2e-15',
'bit_score' => '82.0',
'alignment_length' => '122',
'identity_percentage' => '38.52',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P046591'
)
),
'emh275070' => array(
'gene_id' => 'emh275070',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P050920'
)
),
'emh530600' => array(
'gene_id' => 'emh530600',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P050920'
)
),
'AP00G22010' => array(
'gene_id' => 'AP00G22010',
'e_value' => '2e-14',
'bit_score' => '78.6',
'alignment_length' => '308',
'identity_percentage' => '24.35',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh547740' => array(
'gene_id' => 'emh547740',
'e_value' => '3e-14',
'bit_score' => '78.6',
'alignment_length' => '226',
'identity_percentage' => '27.43',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'FBgn0032671' => array(
'gene_id' => 'FBgn0032671',
'e_value' => '4e-14',
'bit_score' => '77.4',
'alignment_length' => '155',
'identity_percentage' => '31.61',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'MP10G01350' => array(
'gene_id' => 'MP10G01350',
'e_value' => '5e-13',
'bit_score' => '73.9',
'alignment_length' => '283',
'identity_percentage' => '22.97',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P080670'
)
),
'RCC4223.07g01600' => array(
'gene_id' => 'RCC4223.07g01600',
'e_value' => '7e-13',
'bit_score' => '73.2',
'alignment_length' => '292',
'identity_percentage' => '21.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'PTI_02G03790' => array(
'gene_id' => 'PTI_02G03790',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '289',
'identity_percentage' => '22.84',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'FC001G12710' => array(
'gene_id' => 'FC001G12710',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '168',
'identity_percentage' => '26.79',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P039488'
)
),
'CNC64A_078G00010' => array(
'gene_id' => 'CNC64A_078G00010',
'e_value' => '1e-12',
'bit_score' => '72.0',
'alignment_length' => '293',
'identity_percentage' => '22.18',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'MP17G01870' => array(
'gene_id' => 'MP17G01870',
'e_value' => '3e-12',
'bit_score' => '72.4',
'alignment_length' => '292',
'identity_percentage' => '26.03',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'ES0189G00080' => array(
'gene_id' => 'ES0189G00080',
'e_value' => '6e-12',
'bit_score' => '70.9',
'alignment_length' => '152',
'identity_percentage' => '34.87',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh547640' => array(
'gene_id' => 'emh547640',
'e_value' => '1e-11',
'bit_score' => '70.5',
'alignment_length' => '130',
'identity_percentage' => '38.46',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P201709'
)
),
'OS01G36630' => array(
'gene_id' => 'OS01G36630',
'e_value' => '2e-11',
'bit_score' => '68.9',
'alignment_length' => '167',
'identity_percentage' => '28.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ES0111G00300' => array(
'gene_id' => 'ES0111G00300',
'e_value' => '4e-11',
'bit_score' => '68.2',
'alignment_length' => '173',
'identity_percentage' => '32.37',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'MRCC299_03G07730' => array(
'gene_id' => 'MRCC299_03G07730',
'e_value' => '6e-11',
'bit_score' => '68.6',
'alignment_length' => '284',
'identity_percentage' => '25.70',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'MP05G05820' => array(
'gene_id' => 'MP05G05820',
'e_value' => '6e-11',
'bit_score' => '67.8',
'alignment_length' => '311',
'identity_percentage' => '22.19',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'TP02G05220' => array(
'gene_id' => 'TP02G05220',
'e_value' => '4e-10',
'bit_score' => '64.7',
'alignment_length' => '257',
'identity_percentage' => '25.29',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P005795'
)
),
'CV00G22320' => array(
'gene_id' => 'CV00G22320',
'e_value' => '4e-10',
'bit_score' => '65.1',
'alignment_length' => '263',
'identity_percentage' => '23.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'CV00G25650' => array(
'gene_id' => 'CV00G25650',
'e_value' => '5e-10',
'bit_score' => '65.5',
'alignment_length' => '311',
'identity_percentage' => '23.15',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000220',
'ORTHOFAM' => 'ORTHO03P004190'
)
),
'emh445260' => array(
'gene_id' => 'emh445260',
'e_value' => '7e-10',
'bit_score' => '63.9',
'alignment_length' => '237',
'identity_percentage' => '25.74',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P019035',
'ORTHOFAM' => 'ORTHO03P043498'
)
),
'SPAC25H1.02' => array(
'gene_id' => 'SPAC25H1.02',
'e_value' => '1e-09',
'bit_score' => '63.9',
'alignment_length' => '156',
'identity_percentage' => '28.21',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'CNC64A_024G00200' => array(
'gene_id' => 'CNC64A_024G00200',
'e_value' => '1e-09',
'bit_score' => '62.0',
'alignment_length' => '159',
'identity_percentage' => '27.67',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh140980' => array(
'gene_id' => 'emh140980',
'e_value' => '2e-09',
'bit_score' => '62.8',
'alignment_length' => '240',
'identity_percentage' => '25.00',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P019035',
'ORTHOFAM' => 'ORTHO03P043498'
)
),
'ORCC809_13G00700' => array(
'gene_id' => 'ORCC809_13G00700',
'e_value' => '1e-08',
'bit_score' => '60.8',
'alignment_length' => '284',
'identity_percentage' => '26.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P001642'
)
),
'VC00G148220' => array(
'gene_id' => 'VC00G148220',
'e_value' => '4e-08',
'bit_score' => '58.2',
'alignment_length' => '171',
'identity_percentage' => '30.99',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'HE0000G45250' => array(
'gene_id' => 'HE0000G45250',
'e_value' => '9e-08',
'bit_score' => '56.2',
'alignment_length' => '212',
'identity_percentage' => '24.53',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'OM_08G02020' => array(
'gene_id' => 'OM_08G02020',
'e_value' => '5e-07',
'bit_score' => '55.5',
'alignment_length' => '260',
'identity_percentage' => '25.77',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'OM_02G04400' => array(
'gene_id' => 'OM_02G04400',
'e_value' => '8e-07',
'bit_score' => '54.3',
'alignment_length' => '256',
'identity_percentage' => '23.05',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P015173',
'ORTHOFAM' => 'ORTHO03P021123'
)
),
'WBGene00043156' => array(
'gene_id' => 'WBGene00043156',
'e_value' => '9e-07',
'bit_score' => '53.9',
'alignment_length' => '254',
'identity_percentage' => '24.02',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P006279',
'ORTHOFAM' => 'ORTHO03P005795'
)
),
'OL13G02330' => array(
'gene_id' => 'OL13G02330',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'OL21G00670' => array(
'gene_id' => 'OL21G00670',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'AA0009G00660' => array(
'gene_id' => 'AA0009G00660',
'e_value' => '4e-06',
'bit_score' => '53.1',
'alignment_length' => '292',
'identity_percentage' => '23.29',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P171442'
)
),
'emh768770' => array(
'gene_id' => 'emh768770',
'e_value' => '5e-06',
'bit_score' => '51.6',
'alignment_length' => '136',
'identity_percentage' => '28.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006948',
'ORTHOFAM' => 'ORTHO03P009850'
)
),
'OM_06G01440' => array(
'gene_id' => 'OM_06G01440',
'e_value' => '8e-06',
'bit_score' => '51.6',
'alignment_length' => '290',
'identity_percentage' => '23.79',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000536',
'ORTHOFAM' => 'ORTHO03P005579'
)
),
'MRCC299_05G02200' => array(
'gene_id' => 'MRCC299_05G02200',
'e_value' => '9e-06',
'bit_score' => '52.0',
'alignment_length' => '113',
'identity_percentage' => '26.55',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P006948',
'ORTHOFAM' => 'ORTHO03P009850'
)
),
'PTI_14G01340' => array(
'gene_id' => 'PTI_14G01340',
'e_value' => '9e-06',
'bit_score' => '50.8',
'alignment_length' => '244',
'identity_percentage' => '26.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000536',
'ORTHOFAM' => 'ORTHO03P002102'
)
)
)
$similarity_hits_species = array(
'mus' => array(
(int) 0 => 'ENSMUSG00000056962'
),
'hom' => array(
(int) 0 => 'ENSG00000070495',
(int) 1 => 'ENSG00000081692'
),
'cel' => array(
(int) 0 => 'WBGene00004205',
(int) 1 => 'WBGene00043156'
),
'cvu' => array(
(int) 0 => 'CV00G00580',
(int) 1 => 'CV00G18180',
(int) 2 => 'CV00G08220',
(int) 3 => 'CV00G22320',
(int) 4 => 'CV00G25650'
),
'cre' => array(
(int) 0 => 'CR09G08380',
(int) 1 => 'CR07G03790',
(int) 2 => 'CR12G02740'
),
'mpu' => array(
(int) 0 => 'MP17G02470',
(int) 1 => 'MP16G00710',
(int) 2 => 'MP10G01350',
(int) 3 => 'MP17G01870',
(int) 4 => 'MP05G05820'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_03G08300',
(int) 1 => 'MRCC299_10G04840',
(int) 2 => 'MRCC299_06G03390',
(int) 3 => 'MRCC299_03G07730',
(int) 4 => 'MRCC299_05G02200'
),
'phs' => array(
(int) 0 => 'phs162110',
(int) 1 => 'phs158060',
(int) 2 => 'phs346580',
(int) 3 => 'phs101420'
),
'ota' => array(
(int) 0 => 'OT_18G01700',
(int) 1 => 'OT_03G03930'
),
'ome' => array(
(int) 0 => 'OM_18G00390',
(int) 1 => 'OM_09G04140',
(int) 2 => 'OM_08G02020',
(int) 3 => 'OM_02G04400',
(int) 4 => 'OM_06G01440'
),
'orcc809' => array(
(int) 0 => 'ORCC809_17G01750',
(int) 1 => 'ORCC809_06G05010',
(int) 2 => 'ORCC809_13G00700'
),
'esi' => array(
(int) 0 => 'ES0055G00320',
(int) 1 => 'ES0131G00480',
(int) 2 => 'ES0189G00200',
(int) 3 => 'ES0055G00400',
(int) 4 => 'ES0189G00080',
(int) 5 => 'ES0111G00300'
),
'olu' => array(
(int) 0 => 'OL17G01710',
(int) 1 => 'OL03G03880',
(int) 2 => 'OL13G02330',
(int) 3 => 'OL21G00670'
),
'nga' => array(
(int) 0 => 'Naga_100080g27'
),
'acg' => array(
(int) 0 => 'AC00G05760',
(int) 1 => 'AC00G44220'
),
'apr' => array(
(int) 0 => 'AP00G60980',
(int) 1 => 'AP00G18540',
(int) 2 => 'AP00G22010'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g03000',
(int) 1 => 'RCC4223.05g04450',
(int) 2 => 'RCC4223.07g01600'
),
'ptri' => array(
(int) 0 => 'PTI_12G01940',
(int) 1 => 'PTI_09G01280',
(int) 2 => 'PTI_09G03240',
(int) 3 => 'PTI_02G03790',
(int) 4 => 'PTI_14G01340'
),
'pse3' => array(
(int) 0 => 'PI00G69060',
(int) 1 => 'PI00G67060'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_18G00070',
(int) 1 => 'BPRRCC1105_09G04180'
),
'pte' => array(
(int) 0 => 'pte586860',
(int) 1 => 'pte446820',
(int) 2 => 'pte131250',
(int) 3 => 'pte622540'
),
'fcy' => array(
(int) 0 => 'FC023G02380',
(int) 1 => 'FC006G03570',
(int) 2 => 'FC005G08020',
(int) 3 => 'FC001G12710'
),
'aan' => array(
(int) 0 => 'AA0007G00410',
(int) 1 => 'AA0009G01720',
(int) 2 => 'AA0021G00550',
(int) 3 => 'AA0009G00660'
),
'ddi' => array(
(int) 0 => 'DDB_G0270006',
(int) 1 => 'DDB_G0280485'
),
'vca' => array(
(int) 0 => 'VC00G06870',
(int) 1 => 'VC00G136510',
(int) 2 => 'VC00G148220'
),
'ppa' => array(
(int) 0 => 'PP00153G00450',
(int) 1 => 'PP00080G00470',
(int) 2 => 'PP00156G00920'
),
'osa' => array(
(int) 0 => 'OS03G27250',
(int) 1 => 'OS11G36450',
(int) 2 => 'OS01G36630'
),
'emh' => array(
(int) 0 => 'emh378350',
(int) 1 => 'emh368000',
(int) 2 => 'emh532560',
(int) 3 => 'emh108900',
(int) 4 => 'emh524880',
(int) 5 => 'emh488700',
(int) 6 => 'emh104150',
(int) 7 => 'emh633060',
(int) 8 => 'emh275070',
(int) 9 => 'emh530600',
(int) 10 => 'emh547740',
(int) 11 => 'emh547640',
(int) 12 => 'emh445260',
(int) 13 => 'emh140980',
(int) 14 => 'emh768770'
),
'atr' => array(
(int) 0 => 'ATR_00038G02410',
(int) 1 => 'ATR_00004G01530',
(int) 2 => 'ATR_00085G00270'
),
'ath' => array(
(int) 0 => 'AT1G78280',
(int) 1 => 'AT5G06550',
(int) 2 => 'AT5G63080'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_008G00750',
(int) 1 => 'CNC64A_002G01380',
(int) 2 => 'CNC64A_032G00510',
(int) 3 => 'CNC64A_024G00200'
),
'ccr' => array(
(int) 0 => 'ccr164880'
),
'gsu' => array(
(int) 0 => 'gsu12560'
),
'hsp' => array(
(int) 0 => 'HE0000G21000',
(int) 1 => 'HE0000G45250'
),
'tps' => array(
(int) 0 => 'TP09G02710',
(int) 1 => 'TP02G05220'
),
'drm' => array(
(int) 0 => 'FBgn0032671'
),
'scp' => array(
(int) 0 => 'SPAC25H1.02'
)
)
$gene_id = 'ENSMUSG00000056962'
$all_species_index = array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$all_species = array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$gene_family_types_information = array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
)
$gene_family_types_configuration = array()
$data_identifier = 'ENSMUSG00000056962'
$data_type = 'gene_id'
$allow_async_use = true
$gene_placeholder = 'PTI_10G00280'
$gf_placeholder = 'HOM03P007710'
$title_for_layout = 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
$collapse1 = ''
$collapse2 = 'collapse in'
$similarity_hit = array(
'gene_id' => 'CNC64A_078G00040',
'e_value' => '3e-17',
'bit_score' => '85.9',
'alignment_length' => '294',
'identity_percentage' => '24.83',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
)
$checked = null
$similarity_hit_gene = 'CNC64A_078G00040'
include - APP/View/Analysis/custom_tree_creation.ctp, line 169
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::render() - CORE/Cake/View/View.php, line 473
Controller::render() - CORE/Cake/Controller/Controller.php, line 963
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167
[main] - APP/webroot/index.php, line 146
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]Code Context echo "<td><input type='checkbox' name='selected_genes[]' value='".$similarity_hit['gene_id']."' ".$checked." /></td>\n";
echo "<td>".$this->Html->link($similarity_hit_gene,array("controller"=>"genes","action"=>"view",$similarity_hit_gene),array("target"=>"_blank"))."</td>\n";
echo "<td>".$this->Html->link($similarity_hit['common_name'],array("controller"=>"organism","action"=>"view",urlencode($similarity_hit['common_name'])))."</td>\n";
$viewFile = '/xtras/group/biocomp/plaza/versions/plaza_pico_03/app/View/Analysis/custom_tree_creation.ctp'
$dataForView = array(
'allowed_extra_sequences_types' => array(
'aa' => 'Protein',
'dna' => 'DNA'
),
'allowed_editing_methods' => array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
),
'allowed_tree_programs' => array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
),
'allowed_msa_programs' => array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
),
'allowed_number_blasthits' => array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
),
'similarity_hits_genes' => array(
'ENSMUSG00000056962' => array(
'gene_id' => 'ENSMUSG00000056962',
'e_value' => '0.0',
'bit_score' => '839',
'alignment_length' => '404',
'identity_percentage' => '100.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000070495' => array(
'gene_id' => 'ENSG00000070495',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '403',
'identity_percentage' => '97.77',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00004205' => array(
'gene_id' => 'WBGene00004205',
'e_value' => '5e-129',
'bit_score' => '385',
'alignment_length' => '320',
'identity_percentage' => '56.25',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'CV00G00580' => array(
'gene_id' => 'CV00G00580',
'e_value' => '1e-109',
'bit_score' => '332',
'alignment_length' => '282',
'identity_percentage' => '54.61',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CR09G08380' => array(
'gene_id' => 'CR09G08380',
'e_value' => '3e-109',
'bit_score' => '343',
'alignment_length' => '340',
'identity_percentage' => '47.35',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'MP17G02470' => array(
'gene_id' => 'MP17G02470',
'e_value' => '5e-109',
'bit_score' => '338',
'alignment_length' => '336',
'identity_percentage' => '47.92',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_03G08300' => array(
'gene_id' => 'MRCC299_03G08300',
'e_value' => '2e-108',
'bit_score' => '330',
'alignment_length' => '335',
'identity_percentage' => '47.76',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'phs162110' => array(
'gene_id' => 'phs162110',
'e_value' => '4e-104',
'bit_score' => '322',
'alignment_length' => '332',
'identity_percentage' => '44.58',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'OT_18G01700' => array(
'gene_id' => 'OT_18G01700',
'e_value' => '3e-100',
'bit_score' => '312',
'alignment_length' => '350',
'identity_percentage' => '44.57',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OM_18G00390' => array(
'gene_id' => 'OM_18G00390',
'e_value' => '7e-99',
'bit_score' => '308',
'alignment_length' => '340',
'identity_percentage' => '45.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_17G01750' => array(
'gene_id' => 'ORCC809_17G01750',
'e_value' => '1e-97',
'bit_score' => '305',
'alignment_length' => '343',
'identity_percentage' => '46.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'ES0055G00320' => array(
'gene_id' => 'ES0055G00320',
'e_value' => '3e-97',
'bit_score' => '305',
'alignment_length' => '350',
'identity_percentage' => '45.14',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'OL17G01710' => array(
'gene_id' => 'OL17G01710',
'e_value' => '3e-97',
'bit_score' => '304',
'alignment_length' => '427',
'identity_percentage' => '41.22',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100080g27' => array(
'gene_id' => 'Naga_100080g27',
'e_value' => '3e-95',
'bit_score' => '298',
'alignment_length' => '345',
'identity_percentage' => '44.93',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'AC00G05760' => array(
'gene_id' => 'AC00G05760',
'e_value' => '4e-94',
'bit_score' => '305',
'alignment_length' => '329',
'identity_percentage' => '45.90',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'AP00G60980' => array(
'gene_id' => 'AP00G60980',
'e_value' => '7e-93',
'bit_score' => '297',
'alignment_length' => '324',
'identity_percentage' => '45.37',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.04g03000' => array(
'gene_id' => 'RCC4223.04g03000',
'e_value' => '8e-92',
'bit_score' => '289',
'alignment_length' => '331',
'identity_percentage' => '44.71',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PTI_12G01940' => array(
'gene_id' => 'PTI_12G01940',
'e_value' => '2e-85',
'bit_score' => '273',
'alignment_length' => '355',
'identity_percentage' => '42.25',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'PI00G69060' => array(
'gene_id' => 'PI00G69060',
'e_value' => '7e-85',
'bit_score' => '271',
'alignment_length' => '333',
'identity_percentage' => '43.24',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_18G00070' => array(
'gene_id' => 'BPRRCC1105_18G00070',
'e_value' => '4e-79',
'bit_score' => '258',
'alignment_length' => '340',
'identity_percentage' => '39.71',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'pte586860' => array(
'gene_id' => 'pte586860',
'e_value' => '3e-75',
'bit_score' => '246',
'alignment_length' => '345',
'identity_percentage' => '36.52',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'FC023G02380' => array(
'gene_id' => 'FC023G02380',
'e_value' => '6e-75',
'bit_score' => '246',
'alignment_length' => '369',
'identity_percentage' => '37.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'pte446820' => array(
'gene_id' => 'pte446820',
'e_value' => '5e-74',
'bit_score' => '243',
'alignment_length' => '363',
'identity_percentage' => '38.02',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'AA0007G00410' => array(
'gene_id' => 'AA0007G00410',
'e_value' => '2e-73',
'bit_score' => '238',
'alignment_length' => '293',
'identity_percentage' => '42.66',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'pte131250' => array(
'gene_id' => 'pte131250',
'e_value' => '2e-73',
'bit_score' => '241',
'alignment_length' => '363',
'identity_percentage' => '36.91',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0270006' => array(
'gene_id' => 'DDB_G0270006',
'e_value' => '2e-63',
'bit_score' => '224',
'alignment_length' => '253',
'identity_percentage' => '43.87',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'VC00G06870' => array(
'gene_id' => 'VC00G06870',
'e_value' => '4e-56',
'bit_score' => '205',
'alignment_length' => '276',
'identity_percentage' => '40.58',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'phs158060' => array(
'gene_id' => 'phs158060',
'e_value' => '2e-55',
'bit_score' => '197',
'alignment_length' => '299',
'identity_percentage' => '36.45',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'PP00153G00450' => array(
'gene_id' => 'PP00153G00450',
'e_value' => '2e-55',
'bit_score' => '202',
'alignment_length' => '249',
'identity_percentage' => '42.17',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CV00G18180' => array(
'gene_id' => 'CV00G18180',
'e_value' => '7e-55',
'bit_score' => '192',
'alignment_length' => '255',
'identity_percentage' => '40.39',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'pte622540' => array(
'gene_id' => 'pte622540',
'e_value' => '4e-54',
'bit_score' => '189',
'alignment_length' => '299',
'identity_percentage' => '35.12',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'OS03G27250' => array(
'gene_id' => 'OS03G27250',
'e_value' => '5e-54',
'bit_score' => '197',
'alignment_length' => '254',
'identity_percentage' => '42.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'emh378350' => array(
'gene_id' => 'emh378350',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh368000' => array(
'gene_id' => 'emh368000',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'PP00080G00470' => array(
'gene_id' => 'PP00080G00470',
'e_value' => '4e-53',
'bit_score' => '195',
'alignment_length' => '249',
'identity_percentage' => '40.96',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00038G02410' => array(
'gene_id' => 'ATR_00038G02410',
'e_value' => '6e-53',
'bit_score' => '195',
'alignment_length' => '265',
'identity_percentage' => '41.51',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00004G01530' => array(
'gene_id' => 'ATR_00004G01530',
'e_value' => '8e-53',
'bit_score' => '189',
'alignment_length' => '252',
'identity_percentage' => '41.27',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'ES0131G00480' => array(
'gene_id' => 'ES0131G00480',
'e_value' => '2e-52',
'bit_score' => '189',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_06G05010' => array(
'gene_id' => 'ORCC809_06G05010',
'e_value' => '3e-52',
'bit_score' => '184',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'AT1G78280' => array(
'gene_id' => 'AT1G78280',
'e_value' => '4e-52',
'bit_score' => '192',
'alignment_length' => '338',
'identity_percentage' => '35.80',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_008G00750' => array(
'gene_id' => 'CNC64A_008G00750',
'e_value' => '2e-51',
'bit_score' => '191',
'alignment_length' => '251',
'identity_percentage' => '40.64',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'OM_09G04140' => array(
'gene_id' => 'OM_09G04140',
'e_value' => '8e-51',
'bit_score' => '183',
'alignment_length' => '245',
'identity_percentage' => '40.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'PTI_09G01280' => array(
'gene_id' => 'PTI_09G01280',
'e_value' => '5e-50',
'bit_score' => '180',
'alignment_length' => '267',
'identity_percentage' => '37.83',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'AT5G06550' => array(
'gene_id' => 'AT5G06550',
'e_value' => '7e-50',
'bit_score' => '181',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ccr164880' => array(
'gene_id' => 'ccr164880',
'e_value' => '8e-50',
'bit_score' => '181',
'alignment_length' => '253',
'identity_percentage' => '38.34',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'PP00156G00920' => array(
'gene_id' => 'PP00156G00920',
'e_value' => '1e-49',
'bit_score' => '182',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OL03G03880' => array(
'gene_id' => 'OL03G03880',
'e_value' => '7e-49',
'bit_score' => '174',
'alignment_length' => '246',
'identity_percentage' => '39.84',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'OS11G36450' => array(
'gene_id' => 'OS11G36450',
'e_value' => '7e-49',
'bit_score' => '179',
'alignment_length' => '242',
'identity_percentage' => '38.02',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'VC00G136510' => array(
'gene_id' => 'VC00G136510',
'e_value' => '4e-48',
'bit_score' => '178',
'alignment_length' => '299',
'identity_percentage' => '32.44',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CR07G03790' => array(
'gene_id' => 'CR07G03790',
'e_value' => '7e-47',
'bit_score' => '178',
'alignment_length' => '250',
'identity_percentage' => '37.60',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OT_03G03930' => array(
'gene_id' => 'OT_03G03930',
'e_value' => '2e-46',
'bit_score' => '171',
'alignment_length' => '247',
'identity_percentage' => '39.68',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'CR12G02740' => array(
'gene_id' => 'CR12G02740',
'e_value' => '1e-45',
'bit_score' => '172',
'alignment_length' => '253',
'identity_percentage' => '36.76',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'PI00G67060' => array(
'gene_id' => 'PI00G67060',
'e_value' => '3e-45',
'bit_score' => '168',
'alignment_length' => '253',
'identity_percentage' => '35.57',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.05g04450' => array(
'gene_id' => 'RCC4223.05g04450',
'e_value' => '7e-45',
'bit_score' => '167',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'AC00G44220' => array(
'gene_id' => 'AC00G44220',
'e_value' => '5e-44',
'bit_score' => '164',
'alignment_length' => '284',
'identity_percentage' => '34.86',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'phs346580' => array(
'gene_id' => 'phs346580',
'e_value' => '2e-43',
'bit_score' => '167',
'alignment_length' => '289',
'identity_percentage' => '35.29',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'AP00G18540' => array(
'gene_id' => 'AP00G18540',
'e_value' => '2e-42',
'bit_score' => '159',
'alignment_length' => '252',
'identity_percentage' => '34.52',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'MP16G00710' => array(
'gene_id' => 'MP16G00710',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '325',
'identity_percentage' => '31.08',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'gsu12560' => array(
'gene_id' => 'gsu12560',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '261',
'identity_percentage' => '33.72',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G21000' => array(
'gene_id' => 'HE0000G21000',
'e_value' => '4e-36',
'bit_score' => '142',
'alignment_length' => '246',
'identity_percentage' => '34.96',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'PTI_09G03240' => array(
'gene_id' => 'PTI_09G03240',
'e_value' => '1e-34',
'bit_score' => '138',
'alignment_length' => '273',
'identity_percentage' => '32.97',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'ES0189G00200' => array(
'gene_id' => 'ES0189G00200',
'e_value' => '6e-34',
'bit_score' => '131',
'alignment_length' => '172',
'identity_percentage' => '38.95',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'AA0009G01720' => array(
'gene_id' => 'AA0009G01720',
'e_value' => '6e-34',
'bit_score' => '136',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'emh532560' => array(
'gene_id' => 'emh532560',
'e_value' => '4e-33',
'bit_score' => '136',
'alignment_length' => '289',
'identity_percentage' => '31.49',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'TP09G02710' => array(
'gene_id' => 'TP09G02710',
'e_value' => '3e-32',
'bit_score' => '130',
'alignment_length' => '285',
'identity_percentage' => '29.82',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_002G01380' => array(
'gene_id' => 'CNC64A_002G01380',
'e_value' => '1e-31',
'bit_score' => '129',
'alignment_length' => '255',
'identity_percentage' => '32.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0280485' => array(
'gene_id' => 'DDB_G0280485',
'e_value' => '2e-30',
'bit_score' => '125',
'alignment_length' => '158',
'identity_percentage' => '41.77',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_09G04180' => array(
'gene_id' => 'BPRRCC1105_09G04180',
'e_value' => '4e-29',
'bit_score' => '123',
'alignment_length' => '273',
'identity_percentage' => '30.77',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'FC006G03570' => array(
'gene_id' => 'FC006G03570',
'e_value' => '4e-29',
'bit_score' => '122',
'alignment_length' => '388',
'identity_percentage' => '28.09',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_10G04840' => array(
'gene_id' => 'MRCC299_10G04840',
'e_value' => '5e-28',
'bit_score' => '119',
'alignment_length' => '182',
'identity_percentage' => '37.91',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'emh108900' => array(
'gene_id' => 'emh108900',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh524880' => array(
'gene_id' => 'emh524880',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh488700' => array(
'gene_id' => 'emh488700',
'e_value' => '8e-28',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '28.27',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh104150' => array(
'gene_id' => 'emh104150',
'e_value' => '1e-27',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '27.38',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'CV00G08220' => array(
'gene_id' => 'CV00G08220',
'e_value' => '6e-23',
'bit_score' => '104',
'alignment_length' => '183',
'identity_percentage' => '33.33',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_032G00510' => array(
'gene_id' => 'CNC64A_032G00510',
'e_value' => '1e-21',
'bit_score' => '94.4',
'alignment_length' => '64',
'identity_percentage' => '59.38',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_06G03390' => array(
'gene_id' => 'MRCC299_06G03390',
'e_value' => '3e-21',
'bit_score' => '99.0',
'alignment_length' => '305',
'identity_percentage' => '27.21',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'ES0055G00400' => array(
'gene_id' => 'ES0055G00400',
'e_value' => '3e-21',
'bit_score' => '98.6',
'alignment_length' => '291',
'identity_percentage' => '29.90',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'AA0021G00550' => array(
'gene_id' => 'AA0021G00550',
'e_value' => '1e-19',
'bit_score' => '92.8',
'alignment_length' => '174',
'identity_percentage' => '36.21',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'AT5G63080' => array(
'gene_id' => 'AT5G63080',
'e_value' => '1e-19',
'bit_score' => '94.4',
'alignment_length' => '284',
'identity_percentage' => '28.87',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'FC005G08020' => array(
'gene_id' => 'FC005G08020',
'e_value' => '1e-18',
'bit_score' => '90.9',
'alignment_length' => '227',
'identity_percentage' => '29.07',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_078G00040' => array(
'gene_id' => 'CNC64A_078G00040',
'e_value' => '3e-17',
'bit_score' => '85.9',
'alignment_length' => '294',
'identity_percentage' => '24.83',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000081692' => array(
'gene_id' => 'ENSG00000081692',
'e_value' => '4e-17',
'bit_score' => '86.7',
'alignment_length' => '270',
'identity_percentage' => '30.37',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00085G00270' => array(
'gene_id' => 'ATR_00085G00270',
'e_value' => '8e-16',
'bit_score' => '83.2',
'alignment_length' => '305',
'identity_percentage' => '25.90',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'phs101420' => array(
'gene_id' => 'phs101420',
'e_value' => '1e-15',
'bit_score' => '80.9',
'alignment_length' => '269',
'identity_percentage' => '27.51',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'emh633060' => array(
'gene_id' => 'emh633060',
'e_value' => '2e-15',
'bit_score' => '82.0',
'alignment_length' => '122',
'identity_percentage' => '38.52',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh275070' => array(
'gene_id' => 'emh275070',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh530600' => array(
'gene_id' => 'emh530600',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'AP00G22010' => array(
'gene_id' => 'AP00G22010',
'e_value' => '2e-14',
'bit_score' => '78.6',
'alignment_length' => '308',
'identity_percentage' => '24.35',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'emh547740' => array(
'gene_id' => 'emh547740',
'e_value' => '3e-14',
'bit_score' => '78.6',
'alignment_length' => '226',
'identity_percentage' => '27.43',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0032671' => array(
'gene_id' => 'FBgn0032671',
'e_value' => '4e-14',
'bit_score' => '77.4',
'alignment_length' => '155',
'identity_percentage' => '31.61',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'MP10G01350' => array(
'gene_id' => 'MP10G01350',
'e_value' => '5e-13',
'bit_score' => '73.9',
'alignment_length' => '283',
'identity_percentage' => '22.97',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.07g01600' => array(
'gene_id' => 'RCC4223.07g01600',
'e_value' => '7e-13',
'bit_score' => '73.2',
'alignment_length' => '292',
'identity_percentage' => '21.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PTI_02G03790' => array(
'gene_id' => 'PTI_02G03790',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '289',
'identity_percentage' => '22.84',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'FC001G12710' => array(
'gene_id' => 'FC001G12710',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '168',
'identity_percentage' => '26.79',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_078G00010' => array(
'gene_id' => 'CNC64A_078G00010',
'e_value' => '1e-12',
'bit_score' => '72.0',
'alignment_length' => '293',
'identity_percentage' => '22.18',
'gf' => array(
[maximum depth reached]
)
),
'MP17G01870' => array(
'gene_id' => 'MP17G01870',
'e_value' => '3e-12',
'bit_score' => '72.4',
'alignment_length' => '292',
'identity_percentage' => '26.03',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ES0189G00080' => array(
'gene_id' => 'ES0189G00080',
'e_value' => '6e-12',
'bit_score' => '70.9',
'alignment_length' => '152',
'identity_percentage' => '34.87',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'emh547640' => array(
'gene_id' => 'emh547640',
'e_value' => '1e-11',
'bit_score' => '70.5',
'alignment_length' => '130',
'identity_percentage' => '38.46',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'OS01G36630' => array(
'gene_id' => 'OS01G36630',
'e_value' => '2e-11',
'bit_score' => '68.9',
'alignment_length' => '167',
'identity_percentage' => '28.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'ES0111G00300' => array(
'gene_id' => 'ES0111G00300',
'e_value' => '4e-11',
'bit_score' => '68.2',
'alignment_length' => '173',
'identity_percentage' => '32.37',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_03G07730' => array(
'gene_id' => 'MRCC299_03G07730',
'e_value' => '6e-11',
'bit_score' => '68.6',
'alignment_length' => '284',
'identity_percentage' => '25.70',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'MP05G05820' => array(
'gene_id' => 'MP05G05820',
'e_value' => '6e-11',
'bit_score' => '67.8',
'alignment_length' => '311',
'identity_percentage' => '22.19',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'TP02G05220' => array(
'gene_id' => 'TP02G05220',
'e_value' => '4e-10',
'bit_score' => '64.7',
'alignment_length' => '257',
'identity_percentage' => '25.29',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'CV00G22320' => array(
'gene_id' => 'CV00G22320',
'e_value' => '4e-10',
'bit_score' => '65.1',
'alignment_length' => '263',
'identity_percentage' => '23.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CV00G25650' => array(
'gene_id' => 'CV00G25650',
'e_value' => '5e-10',
'bit_score' => '65.5',
'alignment_length' => '311',
'identity_percentage' => '23.15',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'emh445260' => array(
'gene_id' => 'emh445260',
'e_value' => '7e-10',
'bit_score' => '63.9',
'alignment_length' => '237',
'identity_percentage' => '25.74',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'SPAC25H1.02' => array(
'gene_id' => 'SPAC25H1.02',
'e_value' => '1e-09',
'bit_score' => '63.9',
'alignment_length' => '156',
'identity_percentage' => '28.21',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_024G00200' => array(
'gene_id' => 'CNC64A_024G00200',
'e_value' => '1e-09',
'bit_score' => '62.0',
'alignment_length' => '159',
'identity_percentage' => '27.67',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'emh140980' => array(
'gene_id' => 'emh140980',
'e_value' => '2e-09',
'bit_score' => '62.8',
'alignment_length' => '240',
'identity_percentage' => '25.00',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_13G00700' => array(
'gene_id' => 'ORCC809_13G00700',
'e_value' => '1e-08',
'bit_score' => '60.8',
'alignment_length' => '284',
'identity_percentage' => '26.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'VC00G148220' => array(
'gene_id' => 'VC00G148220',
'e_value' => '4e-08',
'bit_score' => '58.2',
'alignment_length' => '171',
'identity_percentage' => '30.99',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G45250' => array(
'gene_id' => 'HE0000G45250',
'e_value' => '9e-08',
'bit_score' => '56.2',
'alignment_length' => '212',
'identity_percentage' => '24.53',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'OM_08G02020' => array(
'gene_id' => 'OM_08G02020',
'e_value' => '5e-07',
'bit_score' => '55.5',
'alignment_length' => '260',
'identity_percentage' => '25.77',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OM_02G04400' => array(
'gene_id' => 'OM_02G04400',
'e_value' => '8e-07',
'bit_score' => '54.3',
'alignment_length' => '256',
'identity_percentage' => '23.05',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00043156' => array(
'gene_id' => 'WBGene00043156',
'e_value' => '9e-07',
'bit_score' => '53.9',
'alignment_length' => '254',
'identity_percentage' => '24.02',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'OL13G02330' => array(
'gene_id' => 'OL13G02330',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'OL21G00670' => array(
'gene_id' => 'OL21G00670',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'AA0009G00660' => array(
'gene_id' => 'AA0009G00660',
'e_value' => '4e-06',
'bit_score' => '53.1',
'alignment_length' => '292',
'identity_percentage' => '23.29',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'emh768770' => array(
'gene_id' => 'emh768770',
'e_value' => '5e-06',
'bit_score' => '51.6',
'alignment_length' => '136',
'identity_percentage' => '28.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'OM_06G01440' => array(
'gene_id' => 'OM_06G01440',
'e_value' => '8e-06',
'bit_score' => '51.6',
'alignment_length' => '290',
'identity_percentage' => '23.79',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_05G02200' => array(
'gene_id' => 'MRCC299_05G02200',
'e_value' => '9e-06',
'bit_score' => '52.0',
'alignment_length' => '113',
'identity_percentage' => '26.55',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'PTI_14G01340' => array(
'gene_id' => 'PTI_14G01340',
'e_value' => '9e-06',
'bit_score' => '50.8',
'alignment_length' => '244',
'identity_percentage' => '26.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
)
),
'similarity_hits_species' => array(
'mus' => array(
(int) 0 => 'ENSMUSG00000056962'
),
'hom' => array(
(int) 0 => 'ENSG00000070495',
(int) 1 => 'ENSG00000081692'
),
'cel' => array(
(int) 0 => 'WBGene00004205',
(int) 1 => 'WBGene00043156'
),
'cvu' => array(
(int) 0 => 'CV00G00580',
(int) 1 => 'CV00G18180',
(int) 2 => 'CV00G08220',
(int) 3 => 'CV00G22320',
(int) 4 => 'CV00G25650'
),
'cre' => array(
(int) 0 => 'CR09G08380',
(int) 1 => 'CR07G03790',
(int) 2 => 'CR12G02740'
),
'mpu' => array(
(int) 0 => 'MP17G02470',
(int) 1 => 'MP16G00710',
(int) 2 => 'MP10G01350',
(int) 3 => 'MP17G01870',
(int) 4 => 'MP05G05820'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_03G08300',
(int) 1 => 'MRCC299_10G04840',
(int) 2 => 'MRCC299_06G03390',
(int) 3 => 'MRCC299_03G07730',
(int) 4 => 'MRCC299_05G02200'
),
'phs' => array(
(int) 0 => 'phs162110',
(int) 1 => 'phs158060',
(int) 2 => 'phs346580',
(int) 3 => 'phs101420'
),
'ota' => array(
(int) 0 => 'OT_18G01700',
(int) 1 => 'OT_03G03930'
),
'ome' => array(
(int) 0 => 'OM_18G00390',
(int) 1 => 'OM_09G04140',
(int) 2 => 'OM_08G02020',
(int) 3 => 'OM_02G04400',
(int) 4 => 'OM_06G01440'
),
'orcc809' => array(
(int) 0 => 'ORCC809_17G01750',
(int) 1 => 'ORCC809_06G05010',
(int) 2 => 'ORCC809_13G00700'
),
'esi' => array(
(int) 0 => 'ES0055G00320',
(int) 1 => 'ES0131G00480',
(int) 2 => 'ES0189G00200',
(int) 3 => 'ES0055G00400',
(int) 4 => 'ES0189G00080',
(int) 5 => 'ES0111G00300'
),
'olu' => array(
(int) 0 => 'OL17G01710',
(int) 1 => 'OL03G03880',
(int) 2 => 'OL13G02330',
(int) 3 => 'OL21G00670'
),
'nga' => array(
(int) 0 => 'Naga_100080g27'
),
'acg' => array(
(int) 0 => 'AC00G05760',
(int) 1 => 'AC00G44220'
),
'apr' => array(
(int) 0 => 'AP00G60980',
(int) 1 => 'AP00G18540',
(int) 2 => 'AP00G22010'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g03000',
(int) 1 => 'RCC4223.05g04450',
(int) 2 => 'RCC4223.07g01600'
),
'ptri' => array(
(int) 0 => 'PTI_12G01940',
(int) 1 => 'PTI_09G01280',
(int) 2 => 'PTI_09G03240',
(int) 3 => 'PTI_02G03790',
(int) 4 => 'PTI_14G01340'
),
'pse3' => array(
(int) 0 => 'PI00G69060',
(int) 1 => 'PI00G67060'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_18G00070',
(int) 1 => 'BPRRCC1105_09G04180'
),
'pte' => array(
(int) 0 => 'pte586860',
(int) 1 => 'pte446820',
(int) 2 => 'pte131250',
(int) 3 => 'pte622540'
),
'fcy' => array(
(int) 0 => 'FC023G02380',
(int) 1 => 'FC006G03570',
(int) 2 => 'FC005G08020',
(int) 3 => 'FC001G12710'
),
'aan' => array(
(int) 0 => 'AA0007G00410',
(int) 1 => 'AA0009G01720',
(int) 2 => 'AA0021G00550',
(int) 3 => 'AA0009G00660'
),
'ddi' => array(
(int) 0 => 'DDB_G0270006',
(int) 1 => 'DDB_G0280485'
),
'vca' => array(
(int) 0 => 'VC00G06870',
(int) 1 => 'VC00G136510',
(int) 2 => 'VC00G148220'
),
'ppa' => array(
(int) 0 => 'PP00153G00450',
(int) 1 => 'PP00080G00470',
(int) 2 => 'PP00156G00920'
),
'osa' => array(
(int) 0 => 'OS03G27250',
(int) 1 => 'OS11G36450',
(int) 2 => 'OS01G36630'
),
'emh' => array(
(int) 0 => 'emh378350',
(int) 1 => 'emh368000',
(int) 2 => 'emh532560',
(int) 3 => 'emh108900',
(int) 4 => 'emh524880',
(int) 5 => 'emh488700',
(int) 6 => 'emh104150',
(int) 7 => 'emh633060',
(int) 8 => 'emh275070',
(int) 9 => 'emh530600',
(int) 10 => 'emh547740',
(int) 11 => 'emh547640',
(int) 12 => 'emh445260',
(int) 13 => 'emh140980',
(int) 14 => 'emh768770'
),
'atr' => array(
(int) 0 => 'ATR_00038G02410',
(int) 1 => 'ATR_00004G01530',
(int) 2 => 'ATR_00085G00270'
),
'ath' => array(
(int) 0 => 'AT1G78280',
(int) 1 => 'AT5G06550',
(int) 2 => 'AT5G63080'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_008G00750',
(int) 1 => 'CNC64A_002G01380',
(int) 2 => 'CNC64A_032G00510',
(int) 3 => 'CNC64A_024G00200'
),
'ccr' => array(
(int) 0 => 'ccr164880'
),
'gsu' => array(
(int) 0 => 'gsu12560'
),
'hsp' => array(
(int) 0 => 'HE0000G21000',
(int) 1 => 'HE0000G45250'
),
'tps' => array(
(int) 0 => 'TP09G02710',
(int) 1 => 'TP02G05220'
),
'drm' => array(
(int) 0 => 'FBgn0032671'
),
'scp' => array(
(int) 0 => 'SPAC25H1.02'
)
),
'gene_id' => 'ENSMUSG00000056962',
'all_species_index' => array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'all_species' => array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'gene_family_types_information' => array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
),
'gene_family_types_configuration' => array(),
'data_identifier' => 'ENSMUSG00000056962',
'data_type' => 'gene_id',
'allow_async_use' => true,
'gene_placeholder' => 'PTI_10G00280',
'gf_placeholder' => 'HOM03P007710',
'title_for_layout' => 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
)
$allowed_extra_sequences_types = array(
'aa' => 'Protein',
'dna' => 'DNA'
)
$allowed_editing_methods = array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
)
$allowed_tree_programs = array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
)
$similarity_hits_genes = array(
'ENSMUSG00000056962' => array(
'gene_id' => 'ENSMUSG00000056962',
'e_value' => '0.0',
'bit_score' => '839',
'alignment_length' => '404',
'identity_percentage' => '100.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ENSG00000070495' => array(
'gene_id' => 'ENSG00000070495',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '403',
'identity_percentage' => '97.77',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'WBGene00004205' => array(
'gene_id' => 'WBGene00004205',
'e_value' => '5e-129',
'bit_score' => '385',
'alignment_length' => '320',
'identity_percentage' => '56.25',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'CV00G00580' => array(
'gene_id' => 'CV00G00580',
'e_value' => '1e-109',
'bit_score' => '332',
'alignment_length' => '282',
'identity_percentage' => '54.61',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'CR09G08380' => array(
'gene_id' => 'CR09G08380',
'e_value' => '3e-109',
'bit_score' => '343',
'alignment_length' => '340',
'identity_percentage' => '47.35',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'MP17G02470' => array(
'gene_id' => 'MP17G02470',
'e_value' => '5e-109',
'bit_score' => '338',
'alignment_length' => '336',
'identity_percentage' => '47.92',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'MRCC299_03G08300' => array(
'gene_id' => 'MRCC299_03G08300',
'e_value' => '2e-108',
'bit_score' => '330',
'alignment_length' => '335',
'identity_percentage' => '47.76',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'phs162110' => array(
'gene_id' => 'phs162110',
'e_value' => '4e-104',
'bit_score' => '322',
'alignment_length' => '332',
'identity_percentage' => '44.58',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OT_18G01700' => array(
'gene_id' => 'OT_18G01700',
'e_value' => '3e-100',
'bit_score' => '312',
'alignment_length' => '350',
'identity_percentage' => '44.57',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OM_18G00390' => array(
'gene_id' => 'OM_18G00390',
'e_value' => '7e-99',
'bit_score' => '308',
'alignment_length' => '340',
'identity_percentage' => '45.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ORCC809_17G01750' => array(
'gene_id' => 'ORCC809_17G01750',
'e_value' => '1e-97',
'bit_score' => '305',
'alignment_length' => '343',
'identity_percentage' => '46.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ES0055G00320' => array(
'gene_id' => 'ES0055G00320',
'e_value' => '3e-97',
'bit_score' => '305',
'alignment_length' => '350',
'identity_percentage' => '45.14',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OL17G01710' => array(
'gene_id' => 'OL17G01710',
'e_value' => '3e-97',
'bit_score' => '304',
'alignment_length' => '427',
'identity_percentage' => '41.22',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'Naga_100080g27' => array(
'gene_id' => 'Naga_100080g27',
'e_value' => '3e-95',
'bit_score' => '298',
'alignment_length' => '345',
'identity_percentage' => '44.93',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AC00G05760' => array(
'gene_id' => 'AC00G05760',
'e_value' => '4e-94',
'bit_score' => '305',
'alignment_length' => '329',
'identity_percentage' => '45.90',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AP00G60980' => array(
'gene_id' => 'AP00G60980',
'e_value' => '7e-93',
'bit_score' => '297',
'alignment_length' => '324',
'identity_percentage' => '45.37',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'RCC4223.04g03000' => array(
'gene_id' => 'RCC4223.04g03000',
'e_value' => '8e-92',
'bit_score' => '289',
'alignment_length' => '331',
'identity_percentage' => '44.71',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PTI_12G01940' => array(
'gene_id' => 'PTI_12G01940',
'e_value' => '2e-85',
'bit_score' => '273',
'alignment_length' => '355',
'identity_percentage' => '42.25',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PI00G69060' => array(
'gene_id' => 'PI00G69060',
'e_value' => '7e-85',
'bit_score' => '271',
'alignment_length' => '333',
'identity_percentage' => '43.24',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'BPRRCC1105_18G00070' => array(
'gene_id' => 'BPRRCC1105_18G00070',
'e_value' => '4e-79',
'bit_score' => '258',
'alignment_length' => '340',
'identity_percentage' => '39.71',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte586860' => array(
'gene_id' => 'pte586860',
'e_value' => '3e-75',
'bit_score' => '246',
'alignment_length' => '345',
'identity_percentage' => '36.52',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'FC023G02380' => array(
'gene_id' => 'FC023G02380',
'e_value' => '6e-75',
'bit_score' => '246',
'alignment_length' => '369',
'identity_percentage' => '37.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte446820' => array(
'gene_id' => 'pte446820',
'e_value' => '5e-74',
'bit_score' => '243',
'alignment_length' => '363',
'identity_percentage' => '38.02',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AA0007G00410' => array(
'gene_id' => 'AA0007G00410',
'e_value' => '2e-73',
'bit_score' => '238',
'alignment_length' => '293',
'identity_percentage' => '42.66',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte131250' => array(
'gene_id' => 'pte131250',
'e_value' => '2e-73',
'bit_score' => '241',
'alignment_length' => '363',
'identity_percentage' => '36.91',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'DDB_G0270006' => array(
'gene_id' => 'DDB_G0270006',
'e_value' => '2e-63',
'bit_score' => '224',
'alignment_length' => '253',
'identity_percentage' => '43.87',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'VC00G06870' => array(
'gene_id' => 'VC00G06870',
'e_value' => '4e-56',
'bit_score' => '205',
'alignment_length' => '276',
'identity_percentage' => '40.58',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'phs158060' => array(
'gene_id' => 'phs158060',
'e_value' => '2e-55',
'bit_score' => '197',
'alignment_length' => '299',
'identity_percentage' => '36.45',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PP00153G00450' => array(
'gene_id' => 'PP00153G00450',
'e_value' => '2e-55',
'bit_score' => '202',
'alignment_length' => '249',
'identity_percentage' => '42.17',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'CV00G18180' => array(
'gene_id' => 'CV00G18180',
'e_value' => '7e-55',
'bit_score' => '192',
'alignment_length' => '255',
'identity_percentage' => '40.39',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'pte622540' => array(
'gene_id' => 'pte622540',
'e_value' => '4e-54',
'bit_score' => '189',
'alignment_length' => '299',
'identity_percentage' => '35.12',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'OS03G27250' => array(
'gene_id' => 'OS03G27250',
'e_value' => '5e-54',
'bit_score' => '197',
'alignment_length' => '254',
'identity_percentage' => '42.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'emh378350' => array(
'gene_id' => 'emh378350',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'emh368000' => array(
'gene_id' => 'emh368000',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PP00080G00470' => array(
'gene_id' => 'PP00080G00470',
'e_value' => '4e-53',
'bit_score' => '195',
'alignment_length' => '249',
'identity_percentage' => '40.96',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'ATR_00038G02410' => array(
'gene_id' => 'ATR_00038G02410',
'e_value' => '6e-53',
'bit_score' => '195',
'alignment_length' => '265',
'identity_percentage' => '41.51',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'ATR_00004G01530' => array(
'gene_id' => 'ATR_00004G01530',
'e_value' => '8e-53',
'bit_score' => '189',
'alignment_length' => '252',
'identity_percentage' => '41.27',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ES0131G00480' => array(
'gene_id' => 'ES0131G00480',
'e_value' => '2e-52',
'bit_score' => '189',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ORCC809_06G05010' => array(
'gene_id' => 'ORCC809_06G05010',
'e_value' => '3e-52',
'bit_score' => '184',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'AT1G78280' => array(
'gene_id' => 'AT1G78280',
'e_value' => '4e-52',
'bit_score' => '192',
'alignment_length' => '338',
'identity_percentage' => '35.80',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'CNC64A_008G00750' => array(
'gene_id' => 'CNC64A_008G00750',
'e_value' => '2e-51',
'bit_score' => '191',
'alignment_length' => '251',
'identity_percentage' => '40.64',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OM_09G04140' => array(
'gene_id' => 'OM_09G04140',
'e_value' => '8e-51',
'bit_score' => '183',
'alignment_length' => '245',
'identity_percentage' => '40.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PTI_09G01280' => array(
'gene_id' => 'PTI_09G01280',
'e_value' => '5e-50',
'bit_score' => '180',
'alignment_length' => '267',
'identity_percentage' => '37.83',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P163203'
)
),
'AT5G06550' => array(
'gene_id' => 'AT5G06550',
'e_value' => '7e-50',
'bit_score' => '181',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ccr164880' => array(
'gene_id' => 'ccr164880',
'e_value' => '8e-50',
'bit_score' => '181',
'alignment_length' => '253',
'identity_percentage' => '38.34',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PP00156G00920' => array(
'gene_id' => 'PP00156G00920',
'e_value' => '1e-49',
'bit_score' => '182',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'OL03G03880' => array(
'gene_id' => 'OL03G03880',
'e_value' => '7e-49',
'bit_score' => '174',
'alignment_length' => '246',
'identity_percentage' => '39.84',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'OS11G36450' => array(
'gene_id' => 'OS11G36450',
'e_value' => '7e-49',
'bit_score' => '179',
'alignment_length' => '242',
'identity_percentage' => '38.02',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'VC00G136510' => array(
'gene_id' => 'VC00G136510',
'e_value' => '4e-48',
'bit_score' => '178',
'alignment_length' => '299',
'identity_percentage' => '32.44',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CR07G03790' => array(
'gene_id' => 'CR07G03790',
'e_value' => '7e-47',
'bit_score' => '178',
'alignment_length' => '250',
'identity_percentage' => '37.60',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P099027'
)
),
'OT_03G03930' => array(
'gene_id' => 'OT_03G03930',
'e_value' => '2e-46',
'bit_score' => '171',
'alignment_length' => '247',
'identity_percentage' => '39.68',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CR12G02740' => array(
'gene_id' => 'CR12G02740',
'e_value' => '1e-45',
'bit_score' => '172',
'alignment_length' => '253',
'identity_percentage' => '36.76',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PI00G67060' => array(
'gene_id' => 'PI00G67060',
'e_value' => '3e-45',
'bit_score' => '168',
'alignment_length' => '253',
'identity_percentage' => '35.57',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'RCC4223.05g04450' => array(
'gene_id' => 'RCC4223.05g04450',
'e_value' => '7e-45',
'bit_score' => '167',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'AC00G44220' => array(
'gene_id' => 'AC00G44220',
'e_value' => '5e-44',
'bit_score' => '164',
'alignment_length' => '284',
'identity_percentage' => '34.86',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'phs346580' => array(
'gene_id' => 'phs346580',
'e_value' => '2e-43',
'bit_score' => '167',
'alignment_length' => '289',
'identity_percentage' => '35.29',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P205695'
)
),
'AP00G18540' => array(
'gene_id' => 'AP00G18540',
'e_value' => '2e-42',
'bit_score' => '159',
'alignment_length' => '252',
'identity_percentage' => '34.52',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'MP16G00710' => array(
'gene_id' => 'MP16G00710',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '325',
'identity_percentage' => '31.08',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'gsu12560' => array(
'gene_id' => 'gsu12560',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '261',
'identity_percentage' => '33.72',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'HE0000G21000' => array(
'gene_id' => 'HE0000G21000',
'e_value' => '4e-36',
'bit_score' => '142',
'alignment_length' => '246',
'identity_percentage' => '34.96',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PTI_09G03240' => array(
'gene_id' => 'PTI_09G03240',
'e_value' => '1e-34',
'bit_score' => '138',
'alignment_length' => '273',
'identity_percentage' => '32.97',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ES0189G00200' => array(
'gene_id' => 'ES0189G00200',
'e_value' => '6e-34',
'bit_score' => '131',
'alignment_length' => '172',
'identity_percentage' => '38.95',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P173302'
)
),
'AA0009G01720' => array(
'gene_id' => 'AA0009G01720',
'e_value' => '6e-34',
'bit_score' => '136',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh532560' => array(
'gene_id' => 'emh532560',
'e_value' => '4e-33',
'bit_score' => '136',
'alignment_length' => '289',
'identity_percentage' => '31.49',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P154983'
)
),
'TP09G02710' => array(
'gene_id' => 'TP09G02710',
'e_value' => '3e-32',
'bit_score' => '130',
'alignment_length' => '285',
'identity_percentage' => '29.82',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CNC64A_002G01380' => array(
'gene_id' => 'CNC64A_002G01380',
'e_value' => '1e-31',
'bit_score' => '129',
'alignment_length' => '255',
'identity_percentage' => '32.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'DDB_G0280485' => array(
'gene_id' => 'DDB_G0280485',
'e_value' => '2e-30',
'bit_score' => '125',
'alignment_length' => '158',
'identity_percentage' => '41.77',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'BPRRCC1105_09G04180' => array(
'gene_id' => 'BPRRCC1105_09G04180',
'e_value' => '4e-29',
'bit_score' => '123',
'alignment_length' => '273',
'identity_percentage' => '30.77',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'FC006G03570' => array(
'gene_id' => 'FC006G03570',
'e_value' => '4e-29',
'bit_score' => '122',
'alignment_length' => '388',
'identity_percentage' => '28.09',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'MRCC299_10G04840' => array(
'gene_id' => 'MRCC299_10G04840',
'e_value' => '5e-28',
'bit_score' => '119',
'alignment_length' => '182',
'identity_percentage' => '37.91',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh108900' => array(
'gene_id' => 'emh108900',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006216',
'ORTHOFAM' => 'ORTHO03P006027'
)
),
'emh524880' => array(
'gene_id' => 'emh524880',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006216',
'ORTHOFAM' => 'ORTHO03P006027'
)
),
'emh488700' => array(
'gene_id' => 'emh488700',
'e_value' => '8e-28',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '28.27',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh104150' => array(
'gene_id' => 'emh104150',
'e_value' => '1e-27',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '27.38',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CV00G08220' => array(
'gene_id' => 'CV00G08220',
'e_value' => '6e-23',
'bit_score' => '104',
'alignment_length' => '183',
'identity_percentage' => '33.33',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P143743'
)
),
'CNC64A_032G00510' => array(
'gene_id' => 'CNC64A_032G00510',
'e_value' => '1e-21',
'bit_score' => '94.4',
'alignment_length' => '64',
'identity_percentage' => '59.38',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P111202'
)
),
'MRCC299_06G03390' => array(
'gene_id' => 'MRCC299_06G03390',
'e_value' => '3e-21',
'bit_score' => '99.0',
'alignment_length' => '305',
'identity_percentage' => '27.21',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ES0055G00400' => array(
'gene_id' => 'ES0055G00400',
'e_value' => '3e-21',
'bit_score' => '98.6',
'alignment_length' => '291',
'identity_percentage' => '29.90',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'AA0021G00550' => array(
'gene_id' => 'AA0021G00550',
'e_value' => '1e-19',
'bit_score' => '92.8',
'alignment_length' => '174',
'identity_percentage' => '36.21',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'AT5G63080' => array(
'gene_id' => 'AT5G63080',
'e_value' => '1e-19',
'bit_score' => '94.4',
'alignment_length' => '284',
'identity_percentage' => '28.87',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'FC005G08020' => array(
'gene_id' => 'FC005G08020',
'e_value' => '1e-18',
'bit_score' => '90.9',
'alignment_length' => '227',
'identity_percentage' => '29.07',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'CNC64A_078G00040' => array(
'gene_id' => 'CNC64A_078G00040',
'e_value' => '3e-17',
'bit_score' => '85.9',
'alignment_length' => '294',
'identity_percentage' => '24.83',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ENSG00000081692' => array(
'gene_id' => 'ENSG00000081692',
'e_value' => '4e-17',
'bit_score' => '86.7',
'alignment_length' => '270',
'identity_percentage' => '30.37',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ATR_00085G00270' => array(
'gene_id' => 'ATR_00085G00270',
'e_value' => '8e-16',
'bit_score' => '83.2',
'alignment_length' => '305',
'identity_percentage' => '25.90',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'phs101420' => array(
'gene_id' => 'phs101420',
'e_value' => '1e-15',
'bit_score' => '80.9',
'alignment_length' => '269',
'identity_percentage' => '27.51',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh633060' => array(
'gene_id' => 'emh633060',
'e_value' => '2e-15',
'bit_score' => '82.0',
'alignment_length' => '122',
'identity_percentage' => '38.52',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P046591'
)
),
'emh275070' => array(
'gene_id' => 'emh275070',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P050920'
)
),
'emh530600' => array(
'gene_id' => 'emh530600',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P050920'
)
),
'AP00G22010' => array(
'gene_id' => 'AP00G22010',
'e_value' => '2e-14',
'bit_score' => '78.6',
'alignment_length' => '308',
'identity_percentage' => '24.35',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh547740' => array(
'gene_id' => 'emh547740',
'e_value' => '3e-14',
'bit_score' => '78.6',
'alignment_length' => '226',
'identity_percentage' => '27.43',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'FBgn0032671' => array(
'gene_id' => 'FBgn0032671',
'e_value' => '4e-14',
'bit_score' => '77.4',
'alignment_length' => '155',
'identity_percentage' => '31.61',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'MP10G01350' => array(
'gene_id' => 'MP10G01350',
'e_value' => '5e-13',
'bit_score' => '73.9',
'alignment_length' => '283',
'identity_percentage' => '22.97',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P080670'
)
),
'RCC4223.07g01600' => array(
'gene_id' => 'RCC4223.07g01600',
'e_value' => '7e-13',
'bit_score' => '73.2',
'alignment_length' => '292',
'identity_percentage' => '21.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'PTI_02G03790' => array(
'gene_id' => 'PTI_02G03790',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '289',
'identity_percentage' => '22.84',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'FC001G12710' => array(
'gene_id' => 'FC001G12710',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '168',
'identity_percentage' => '26.79',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P039488'
)
),
'CNC64A_078G00010' => array(
'gene_id' => 'CNC64A_078G00010',
'e_value' => '1e-12',
'bit_score' => '72.0',
'alignment_length' => '293',
'identity_percentage' => '22.18',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'MP17G01870' => array(
'gene_id' => 'MP17G01870',
'e_value' => '3e-12',
'bit_score' => '72.4',
'alignment_length' => '292',
'identity_percentage' => '26.03',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'ES0189G00080' => array(
'gene_id' => 'ES0189G00080',
'e_value' => '6e-12',
'bit_score' => '70.9',
'alignment_length' => '152',
'identity_percentage' => '34.87',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh547640' => array(
'gene_id' => 'emh547640',
'e_value' => '1e-11',
'bit_score' => '70.5',
'alignment_length' => '130',
'identity_percentage' => '38.46',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P201709'
)
),
'OS01G36630' => array(
'gene_id' => 'OS01G36630',
'e_value' => '2e-11',
'bit_score' => '68.9',
'alignment_length' => '167',
'identity_percentage' => '28.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ES0111G00300' => array(
'gene_id' => 'ES0111G00300',
'e_value' => '4e-11',
'bit_score' => '68.2',
'alignment_length' => '173',
'identity_percentage' => '32.37',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'MRCC299_03G07730' => array(
'gene_id' => 'MRCC299_03G07730',
'e_value' => '6e-11',
'bit_score' => '68.6',
'alignment_length' => '284',
'identity_percentage' => '25.70',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'MP05G05820' => array(
'gene_id' => 'MP05G05820',
'e_value' => '6e-11',
'bit_score' => '67.8',
'alignment_length' => '311',
'identity_percentage' => '22.19',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'TP02G05220' => array(
'gene_id' => 'TP02G05220',
'e_value' => '4e-10',
'bit_score' => '64.7',
'alignment_length' => '257',
'identity_percentage' => '25.29',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P005795'
)
),
'CV00G22320' => array(
'gene_id' => 'CV00G22320',
'e_value' => '4e-10',
'bit_score' => '65.1',
'alignment_length' => '263',
'identity_percentage' => '23.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'CV00G25650' => array(
'gene_id' => 'CV00G25650',
'e_value' => '5e-10',
'bit_score' => '65.5',
'alignment_length' => '311',
'identity_percentage' => '23.15',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000220',
'ORTHOFAM' => 'ORTHO03P004190'
)
),
'emh445260' => array(
'gene_id' => 'emh445260',
'e_value' => '7e-10',
'bit_score' => '63.9',
'alignment_length' => '237',
'identity_percentage' => '25.74',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P019035',
'ORTHOFAM' => 'ORTHO03P043498'
)
),
'SPAC25H1.02' => array(
'gene_id' => 'SPAC25H1.02',
'e_value' => '1e-09',
'bit_score' => '63.9',
'alignment_length' => '156',
'identity_percentage' => '28.21',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'CNC64A_024G00200' => array(
'gene_id' => 'CNC64A_024G00200',
'e_value' => '1e-09',
'bit_score' => '62.0',
'alignment_length' => '159',
'identity_percentage' => '27.67',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh140980' => array(
'gene_id' => 'emh140980',
'e_value' => '2e-09',
'bit_score' => '62.8',
'alignment_length' => '240',
'identity_percentage' => '25.00',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P019035',
'ORTHOFAM' => 'ORTHO03P043498'
)
),
'ORCC809_13G00700' => array(
'gene_id' => 'ORCC809_13G00700',
'e_value' => '1e-08',
'bit_score' => '60.8',
'alignment_length' => '284',
'identity_percentage' => '26.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P001642'
)
),
'VC00G148220' => array(
'gene_id' => 'VC00G148220',
'e_value' => '4e-08',
'bit_score' => '58.2',
'alignment_length' => '171',
'identity_percentage' => '30.99',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'HE0000G45250' => array(
'gene_id' => 'HE0000G45250',
'e_value' => '9e-08',
'bit_score' => '56.2',
'alignment_length' => '212',
'identity_percentage' => '24.53',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'OM_08G02020' => array(
'gene_id' => 'OM_08G02020',
'e_value' => '5e-07',
'bit_score' => '55.5',
'alignment_length' => '260',
'identity_percentage' => '25.77',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'OM_02G04400' => array(
'gene_id' => 'OM_02G04400',
'e_value' => '8e-07',
'bit_score' => '54.3',
'alignment_length' => '256',
'identity_percentage' => '23.05',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P015173',
'ORTHOFAM' => 'ORTHO03P021123'
)
),
'WBGene00043156' => array(
'gene_id' => 'WBGene00043156',
'e_value' => '9e-07',
'bit_score' => '53.9',
'alignment_length' => '254',
'identity_percentage' => '24.02',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P006279',
'ORTHOFAM' => 'ORTHO03P005795'
)
),
'OL13G02330' => array(
'gene_id' => 'OL13G02330',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'OL21G00670' => array(
'gene_id' => 'OL21G00670',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'AA0009G00660' => array(
'gene_id' => 'AA0009G00660',
'e_value' => '4e-06',
'bit_score' => '53.1',
'alignment_length' => '292',
'identity_percentage' => '23.29',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P171442'
)
),
'emh768770' => array(
'gene_id' => 'emh768770',
'e_value' => '5e-06',
'bit_score' => '51.6',
'alignment_length' => '136',
'identity_percentage' => '28.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006948',
'ORTHOFAM' => 'ORTHO03P009850'
)
),
'OM_06G01440' => array(
'gene_id' => 'OM_06G01440',
'e_value' => '8e-06',
'bit_score' => '51.6',
'alignment_length' => '290',
'identity_percentage' => '23.79',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000536',
'ORTHOFAM' => 'ORTHO03P005579'
)
),
'MRCC299_05G02200' => array(
'gene_id' => 'MRCC299_05G02200',
'e_value' => '9e-06',
'bit_score' => '52.0',
'alignment_length' => '113',
'identity_percentage' => '26.55',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P006948',
'ORTHOFAM' => 'ORTHO03P009850'
)
),
'PTI_14G01340' => array(
'gene_id' => 'PTI_14G01340',
'e_value' => '9e-06',
'bit_score' => '50.8',
'alignment_length' => '244',
'identity_percentage' => '26.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000536',
'ORTHOFAM' => 'ORTHO03P002102'
)
)
)
$similarity_hits_species = array(
'mus' => array(
(int) 0 => 'ENSMUSG00000056962'
),
'hom' => array(
(int) 0 => 'ENSG00000070495',
(int) 1 => 'ENSG00000081692'
),
'cel' => array(
(int) 0 => 'WBGene00004205',
(int) 1 => 'WBGene00043156'
),
'cvu' => array(
(int) 0 => 'CV00G00580',
(int) 1 => 'CV00G18180',
(int) 2 => 'CV00G08220',
(int) 3 => 'CV00G22320',
(int) 4 => 'CV00G25650'
),
'cre' => array(
(int) 0 => 'CR09G08380',
(int) 1 => 'CR07G03790',
(int) 2 => 'CR12G02740'
),
'mpu' => array(
(int) 0 => 'MP17G02470',
(int) 1 => 'MP16G00710',
(int) 2 => 'MP10G01350',
(int) 3 => 'MP17G01870',
(int) 4 => 'MP05G05820'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_03G08300',
(int) 1 => 'MRCC299_10G04840',
(int) 2 => 'MRCC299_06G03390',
(int) 3 => 'MRCC299_03G07730',
(int) 4 => 'MRCC299_05G02200'
),
'phs' => array(
(int) 0 => 'phs162110',
(int) 1 => 'phs158060',
(int) 2 => 'phs346580',
(int) 3 => 'phs101420'
),
'ota' => array(
(int) 0 => 'OT_18G01700',
(int) 1 => 'OT_03G03930'
),
'ome' => array(
(int) 0 => 'OM_18G00390',
(int) 1 => 'OM_09G04140',
(int) 2 => 'OM_08G02020',
(int) 3 => 'OM_02G04400',
(int) 4 => 'OM_06G01440'
),
'orcc809' => array(
(int) 0 => 'ORCC809_17G01750',
(int) 1 => 'ORCC809_06G05010',
(int) 2 => 'ORCC809_13G00700'
),
'esi' => array(
(int) 0 => 'ES0055G00320',
(int) 1 => 'ES0131G00480',
(int) 2 => 'ES0189G00200',
(int) 3 => 'ES0055G00400',
(int) 4 => 'ES0189G00080',
(int) 5 => 'ES0111G00300'
),
'olu' => array(
(int) 0 => 'OL17G01710',
(int) 1 => 'OL03G03880',
(int) 2 => 'OL13G02330',
(int) 3 => 'OL21G00670'
),
'nga' => array(
(int) 0 => 'Naga_100080g27'
),
'acg' => array(
(int) 0 => 'AC00G05760',
(int) 1 => 'AC00G44220'
),
'apr' => array(
(int) 0 => 'AP00G60980',
(int) 1 => 'AP00G18540',
(int) 2 => 'AP00G22010'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g03000',
(int) 1 => 'RCC4223.05g04450',
(int) 2 => 'RCC4223.07g01600'
),
'ptri' => array(
(int) 0 => 'PTI_12G01940',
(int) 1 => 'PTI_09G01280',
(int) 2 => 'PTI_09G03240',
(int) 3 => 'PTI_02G03790',
(int) 4 => 'PTI_14G01340'
),
'pse3' => array(
(int) 0 => 'PI00G69060',
(int) 1 => 'PI00G67060'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_18G00070',
(int) 1 => 'BPRRCC1105_09G04180'
),
'pte' => array(
(int) 0 => 'pte586860',
(int) 1 => 'pte446820',
(int) 2 => 'pte131250',
(int) 3 => 'pte622540'
),
'fcy' => array(
(int) 0 => 'FC023G02380',
(int) 1 => 'FC006G03570',
(int) 2 => 'FC005G08020',
(int) 3 => 'FC001G12710'
),
'aan' => array(
(int) 0 => 'AA0007G00410',
(int) 1 => 'AA0009G01720',
(int) 2 => 'AA0021G00550',
(int) 3 => 'AA0009G00660'
),
'ddi' => array(
(int) 0 => 'DDB_G0270006',
(int) 1 => 'DDB_G0280485'
),
'vca' => array(
(int) 0 => 'VC00G06870',
(int) 1 => 'VC00G136510',
(int) 2 => 'VC00G148220'
),
'ppa' => array(
(int) 0 => 'PP00153G00450',
(int) 1 => 'PP00080G00470',
(int) 2 => 'PP00156G00920'
),
'osa' => array(
(int) 0 => 'OS03G27250',
(int) 1 => 'OS11G36450',
(int) 2 => 'OS01G36630'
),
'emh' => array(
(int) 0 => 'emh378350',
(int) 1 => 'emh368000',
(int) 2 => 'emh532560',
(int) 3 => 'emh108900',
(int) 4 => 'emh524880',
(int) 5 => 'emh488700',
(int) 6 => 'emh104150',
(int) 7 => 'emh633060',
(int) 8 => 'emh275070',
(int) 9 => 'emh530600',
(int) 10 => 'emh547740',
(int) 11 => 'emh547640',
(int) 12 => 'emh445260',
(int) 13 => 'emh140980',
(int) 14 => 'emh768770'
),
'atr' => array(
(int) 0 => 'ATR_00038G02410',
(int) 1 => 'ATR_00004G01530',
(int) 2 => 'ATR_00085G00270'
),
'ath' => array(
(int) 0 => 'AT1G78280',
(int) 1 => 'AT5G06550',
(int) 2 => 'AT5G63080'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_008G00750',
(int) 1 => 'CNC64A_002G01380',
(int) 2 => 'CNC64A_032G00510',
(int) 3 => 'CNC64A_024G00200'
),
'ccr' => array(
(int) 0 => 'ccr164880'
),
'gsu' => array(
(int) 0 => 'gsu12560'
),
'hsp' => array(
(int) 0 => 'HE0000G21000',
(int) 1 => 'HE0000G45250'
),
'tps' => array(
(int) 0 => 'TP09G02710',
(int) 1 => 'TP02G05220'
),
'drm' => array(
(int) 0 => 'FBgn0032671'
),
'scp' => array(
(int) 0 => 'SPAC25H1.02'
)
)
$gene_id = 'ENSMUSG00000056962'
$all_species_index = array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$all_species = array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$gene_family_types_information = array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
)
$gene_family_types_configuration = array()
$data_identifier = 'ENSMUSG00000056962'
$data_type = 'gene_id'
$allow_async_use = true
$gene_placeholder = 'PTI_10G00280'
$gf_placeholder = 'HOM03P007710'
$title_for_layout = 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
$collapse1 = ''
$collapse2 = 'collapse in'
$similarity_hit = array(
'gene_id' => 'CNC64A_078G00040',
'e_value' => '3e-17',
'bit_score' => '85.9',
'alignment_length' => '294',
'identity_percentage' => '24.83',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
)
$checked = null
$similarity_hit_gene = 'CNC64A_078G00040'
include - APP/View/Analysis/custom_tree_creation.ctp, line 169
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::render() - CORE/Cake/View/View.php, line 473
Controller::render() - CORE/Cake/Controller/Controller.php, line 963
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167
[main] - APP/webroot/index.php, line 146
|
3e-17 |
85.9 |
294 |
24.83 |
|
CNC64A_078G00010 |
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]Code Context echo "<td><input type='checkbox' name='selected_genes[]' value='".$similarity_hit['gene_id']."' ".$checked." /></td>\n";
echo "<td>".$this->Html->link($similarity_hit_gene,array("controller"=>"genes","action"=>"view",$similarity_hit_gene),array("target"=>"_blank"))."</td>\n";
echo "<td>".$this->Html->link($similarity_hit['common_name'],array("controller"=>"organism","action"=>"view",urlencode($similarity_hit['common_name'])))."</td>\n";
$viewFile = '/xtras/group/biocomp/plaza/versions/plaza_pico_03/app/View/Analysis/custom_tree_creation.ctp'
$dataForView = array(
'allowed_extra_sequences_types' => array(
'aa' => 'Protein',
'dna' => 'DNA'
),
'allowed_editing_methods' => array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
),
'allowed_tree_programs' => array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
),
'allowed_msa_programs' => array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
),
'allowed_number_blasthits' => array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
),
'similarity_hits_genes' => array(
'ENSMUSG00000056962' => array(
'gene_id' => 'ENSMUSG00000056962',
'e_value' => '0.0',
'bit_score' => '839',
'alignment_length' => '404',
'identity_percentage' => '100.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000070495' => array(
'gene_id' => 'ENSG00000070495',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '403',
'identity_percentage' => '97.77',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00004205' => array(
'gene_id' => 'WBGene00004205',
'e_value' => '5e-129',
'bit_score' => '385',
'alignment_length' => '320',
'identity_percentage' => '56.25',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'CV00G00580' => array(
'gene_id' => 'CV00G00580',
'e_value' => '1e-109',
'bit_score' => '332',
'alignment_length' => '282',
'identity_percentage' => '54.61',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CR09G08380' => array(
'gene_id' => 'CR09G08380',
'e_value' => '3e-109',
'bit_score' => '343',
'alignment_length' => '340',
'identity_percentage' => '47.35',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'MP17G02470' => array(
'gene_id' => 'MP17G02470',
'e_value' => '5e-109',
'bit_score' => '338',
'alignment_length' => '336',
'identity_percentage' => '47.92',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_03G08300' => array(
'gene_id' => 'MRCC299_03G08300',
'e_value' => '2e-108',
'bit_score' => '330',
'alignment_length' => '335',
'identity_percentage' => '47.76',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'phs162110' => array(
'gene_id' => 'phs162110',
'e_value' => '4e-104',
'bit_score' => '322',
'alignment_length' => '332',
'identity_percentage' => '44.58',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'OT_18G01700' => array(
'gene_id' => 'OT_18G01700',
'e_value' => '3e-100',
'bit_score' => '312',
'alignment_length' => '350',
'identity_percentage' => '44.57',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OM_18G00390' => array(
'gene_id' => 'OM_18G00390',
'e_value' => '7e-99',
'bit_score' => '308',
'alignment_length' => '340',
'identity_percentage' => '45.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_17G01750' => array(
'gene_id' => 'ORCC809_17G01750',
'e_value' => '1e-97',
'bit_score' => '305',
'alignment_length' => '343',
'identity_percentage' => '46.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'ES0055G00320' => array(
'gene_id' => 'ES0055G00320',
'e_value' => '3e-97',
'bit_score' => '305',
'alignment_length' => '350',
'identity_percentage' => '45.14',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'OL17G01710' => array(
'gene_id' => 'OL17G01710',
'e_value' => '3e-97',
'bit_score' => '304',
'alignment_length' => '427',
'identity_percentage' => '41.22',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100080g27' => array(
'gene_id' => 'Naga_100080g27',
'e_value' => '3e-95',
'bit_score' => '298',
'alignment_length' => '345',
'identity_percentage' => '44.93',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'AC00G05760' => array(
'gene_id' => 'AC00G05760',
'e_value' => '4e-94',
'bit_score' => '305',
'alignment_length' => '329',
'identity_percentage' => '45.90',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'AP00G60980' => array(
'gene_id' => 'AP00G60980',
'e_value' => '7e-93',
'bit_score' => '297',
'alignment_length' => '324',
'identity_percentage' => '45.37',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.04g03000' => array(
'gene_id' => 'RCC4223.04g03000',
'e_value' => '8e-92',
'bit_score' => '289',
'alignment_length' => '331',
'identity_percentage' => '44.71',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PTI_12G01940' => array(
'gene_id' => 'PTI_12G01940',
'e_value' => '2e-85',
'bit_score' => '273',
'alignment_length' => '355',
'identity_percentage' => '42.25',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'PI00G69060' => array(
'gene_id' => 'PI00G69060',
'e_value' => '7e-85',
'bit_score' => '271',
'alignment_length' => '333',
'identity_percentage' => '43.24',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_18G00070' => array(
'gene_id' => 'BPRRCC1105_18G00070',
'e_value' => '4e-79',
'bit_score' => '258',
'alignment_length' => '340',
'identity_percentage' => '39.71',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'pte586860' => array(
'gene_id' => 'pte586860',
'e_value' => '3e-75',
'bit_score' => '246',
'alignment_length' => '345',
'identity_percentage' => '36.52',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'FC023G02380' => array(
'gene_id' => 'FC023G02380',
'e_value' => '6e-75',
'bit_score' => '246',
'alignment_length' => '369',
'identity_percentage' => '37.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'pte446820' => array(
'gene_id' => 'pte446820',
'e_value' => '5e-74',
'bit_score' => '243',
'alignment_length' => '363',
'identity_percentage' => '38.02',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'AA0007G00410' => array(
'gene_id' => 'AA0007G00410',
'e_value' => '2e-73',
'bit_score' => '238',
'alignment_length' => '293',
'identity_percentage' => '42.66',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'pte131250' => array(
'gene_id' => 'pte131250',
'e_value' => '2e-73',
'bit_score' => '241',
'alignment_length' => '363',
'identity_percentage' => '36.91',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0270006' => array(
'gene_id' => 'DDB_G0270006',
'e_value' => '2e-63',
'bit_score' => '224',
'alignment_length' => '253',
'identity_percentage' => '43.87',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'VC00G06870' => array(
'gene_id' => 'VC00G06870',
'e_value' => '4e-56',
'bit_score' => '205',
'alignment_length' => '276',
'identity_percentage' => '40.58',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'phs158060' => array(
'gene_id' => 'phs158060',
'e_value' => '2e-55',
'bit_score' => '197',
'alignment_length' => '299',
'identity_percentage' => '36.45',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'PP00153G00450' => array(
'gene_id' => 'PP00153G00450',
'e_value' => '2e-55',
'bit_score' => '202',
'alignment_length' => '249',
'identity_percentage' => '42.17',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CV00G18180' => array(
'gene_id' => 'CV00G18180',
'e_value' => '7e-55',
'bit_score' => '192',
'alignment_length' => '255',
'identity_percentage' => '40.39',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'pte622540' => array(
'gene_id' => 'pte622540',
'e_value' => '4e-54',
'bit_score' => '189',
'alignment_length' => '299',
'identity_percentage' => '35.12',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'OS03G27250' => array(
'gene_id' => 'OS03G27250',
'e_value' => '5e-54',
'bit_score' => '197',
'alignment_length' => '254',
'identity_percentage' => '42.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'emh378350' => array(
'gene_id' => 'emh378350',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh368000' => array(
'gene_id' => 'emh368000',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'PP00080G00470' => array(
'gene_id' => 'PP00080G00470',
'e_value' => '4e-53',
'bit_score' => '195',
'alignment_length' => '249',
'identity_percentage' => '40.96',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00038G02410' => array(
'gene_id' => 'ATR_00038G02410',
'e_value' => '6e-53',
'bit_score' => '195',
'alignment_length' => '265',
'identity_percentage' => '41.51',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00004G01530' => array(
'gene_id' => 'ATR_00004G01530',
'e_value' => '8e-53',
'bit_score' => '189',
'alignment_length' => '252',
'identity_percentage' => '41.27',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'ES0131G00480' => array(
'gene_id' => 'ES0131G00480',
'e_value' => '2e-52',
'bit_score' => '189',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_06G05010' => array(
'gene_id' => 'ORCC809_06G05010',
'e_value' => '3e-52',
'bit_score' => '184',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'AT1G78280' => array(
'gene_id' => 'AT1G78280',
'e_value' => '4e-52',
'bit_score' => '192',
'alignment_length' => '338',
'identity_percentage' => '35.80',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_008G00750' => array(
'gene_id' => 'CNC64A_008G00750',
'e_value' => '2e-51',
'bit_score' => '191',
'alignment_length' => '251',
'identity_percentage' => '40.64',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'OM_09G04140' => array(
'gene_id' => 'OM_09G04140',
'e_value' => '8e-51',
'bit_score' => '183',
'alignment_length' => '245',
'identity_percentage' => '40.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'PTI_09G01280' => array(
'gene_id' => 'PTI_09G01280',
'e_value' => '5e-50',
'bit_score' => '180',
'alignment_length' => '267',
'identity_percentage' => '37.83',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'AT5G06550' => array(
'gene_id' => 'AT5G06550',
'e_value' => '7e-50',
'bit_score' => '181',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ccr164880' => array(
'gene_id' => 'ccr164880',
'e_value' => '8e-50',
'bit_score' => '181',
'alignment_length' => '253',
'identity_percentage' => '38.34',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'PP00156G00920' => array(
'gene_id' => 'PP00156G00920',
'e_value' => '1e-49',
'bit_score' => '182',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OL03G03880' => array(
'gene_id' => 'OL03G03880',
'e_value' => '7e-49',
'bit_score' => '174',
'alignment_length' => '246',
'identity_percentage' => '39.84',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'OS11G36450' => array(
'gene_id' => 'OS11G36450',
'e_value' => '7e-49',
'bit_score' => '179',
'alignment_length' => '242',
'identity_percentage' => '38.02',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'VC00G136510' => array(
'gene_id' => 'VC00G136510',
'e_value' => '4e-48',
'bit_score' => '178',
'alignment_length' => '299',
'identity_percentage' => '32.44',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CR07G03790' => array(
'gene_id' => 'CR07G03790',
'e_value' => '7e-47',
'bit_score' => '178',
'alignment_length' => '250',
'identity_percentage' => '37.60',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OT_03G03930' => array(
'gene_id' => 'OT_03G03930',
'e_value' => '2e-46',
'bit_score' => '171',
'alignment_length' => '247',
'identity_percentage' => '39.68',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'CR12G02740' => array(
'gene_id' => 'CR12G02740',
'e_value' => '1e-45',
'bit_score' => '172',
'alignment_length' => '253',
'identity_percentage' => '36.76',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'PI00G67060' => array(
'gene_id' => 'PI00G67060',
'e_value' => '3e-45',
'bit_score' => '168',
'alignment_length' => '253',
'identity_percentage' => '35.57',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.05g04450' => array(
'gene_id' => 'RCC4223.05g04450',
'e_value' => '7e-45',
'bit_score' => '167',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'AC00G44220' => array(
'gene_id' => 'AC00G44220',
'e_value' => '5e-44',
'bit_score' => '164',
'alignment_length' => '284',
'identity_percentage' => '34.86',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'phs346580' => array(
'gene_id' => 'phs346580',
'e_value' => '2e-43',
'bit_score' => '167',
'alignment_length' => '289',
'identity_percentage' => '35.29',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'AP00G18540' => array(
'gene_id' => 'AP00G18540',
'e_value' => '2e-42',
'bit_score' => '159',
'alignment_length' => '252',
'identity_percentage' => '34.52',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'MP16G00710' => array(
'gene_id' => 'MP16G00710',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '325',
'identity_percentage' => '31.08',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'gsu12560' => array(
'gene_id' => 'gsu12560',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '261',
'identity_percentage' => '33.72',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G21000' => array(
'gene_id' => 'HE0000G21000',
'e_value' => '4e-36',
'bit_score' => '142',
'alignment_length' => '246',
'identity_percentage' => '34.96',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'PTI_09G03240' => array(
'gene_id' => 'PTI_09G03240',
'e_value' => '1e-34',
'bit_score' => '138',
'alignment_length' => '273',
'identity_percentage' => '32.97',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'ES0189G00200' => array(
'gene_id' => 'ES0189G00200',
'e_value' => '6e-34',
'bit_score' => '131',
'alignment_length' => '172',
'identity_percentage' => '38.95',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'AA0009G01720' => array(
'gene_id' => 'AA0009G01720',
'e_value' => '6e-34',
'bit_score' => '136',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'emh532560' => array(
'gene_id' => 'emh532560',
'e_value' => '4e-33',
'bit_score' => '136',
'alignment_length' => '289',
'identity_percentage' => '31.49',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'TP09G02710' => array(
'gene_id' => 'TP09G02710',
'e_value' => '3e-32',
'bit_score' => '130',
'alignment_length' => '285',
'identity_percentage' => '29.82',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_002G01380' => array(
'gene_id' => 'CNC64A_002G01380',
'e_value' => '1e-31',
'bit_score' => '129',
'alignment_length' => '255',
'identity_percentage' => '32.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0280485' => array(
'gene_id' => 'DDB_G0280485',
'e_value' => '2e-30',
'bit_score' => '125',
'alignment_length' => '158',
'identity_percentage' => '41.77',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_09G04180' => array(
'gene_id' => 'BPRRCC1105_09G04180',
'e_value' => '4e-29',
'bit_score' => '123',
'alignment_length' => '273',
'identity_percentage' => '30.77',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'FC006G03570' => array(
'gene_id' => 'FC006G03570',
'e_value' => '4e-29',
'bit_score' => '122',
'alignment_length' => '388',
'identity_percentage' => '28.09',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_10G04840' => array(
'gene_id' => 'MRCC299_10G04840',
'e_value' => '5e-28',
'bit_score' => '119',
'alignment_length' => '182',
'identity_percentage' => '37.91',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'emh108900' => array(
'gene_id' => 'emh108900',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh524880' => array(
'gene_id' => 'emh524880',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh488700' => array(
'gene_id' => 'emh488700',
'e_value' => '8e-28',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '28.27',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh104150' => array(
'gene_id' => 'emh104150',
'e_value' => '1e-27',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '27.38',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'CV00G08220' => array(
'gene_id' => 'CV00G08220',
'e_value' => '6e-23',
'bit_score' => '104',
'alignment_length' => '183',
'identity_percentage' => '33.33',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_032G00510' => array(
'gene_id' => 'CNC64A_032G00510',
'e_value' => '1e-21',
'bit_score' => '94.4',
'alignment_length' => '64',
'identity_percentage' => '59.38',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_06G03390' => array(
'gene_id' => 'MRCC299_06G03390',
'e_value' => '3e-21',
'bit_score' => '99.0',
'alignment_length' => '305',
'identity_percentage' => '27.21',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'ES0055G00400' => array(
'gene_id' => 'ES0055G00400',
'e_value' => '3e-21',
'bit_score' => '98.6',
'alignment_length' => '291',
'identity_percentage' => '29.90',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'AA0021G00550' => array(
'gene_id' => 'AA0021G00550',
'e_value' => '1e-19',
'bit_score' => '92.8',
'alignment_length' => '174',
'identity_percentage' => '36.21',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'AT5G63080' => array(
'gene_id' => 'AT5G63080',
'e_value' => '1e-19',
'bit_score' => '94.4',
'alignment_length' => '284',
'identity_percentage' => '28.87',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'FC005G08020' => array(
'gene_id' => 'FC005G08020',
'e_value' => '1e-18',
'bit_score' => '90.9',
'alignment_length' => '227',
'identity_percentage' => '29.07',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_078G00040' => array(
'gene_id' => 'CNC64A_078G00040',
'e_value' => '3e-17',
'bit_score' => '85.9',
'alignment_length' => '294',
'identity_percentage' => '24.83',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000081692' => array(
'gene_id' => 'ENSG00000081692',
'e_value' => '4e-17',
'bit_score' => '86.7',
'alignment_length' => '270',
'identity_percentage' => '30.37',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00085G00270' => array(
'gene_id' => 'ATR_00085G00270',
'e_value' => '8e-16',
'bit_score' => '83.2',
'alignment_length' => '305',
'identity_percentage' => '25.90',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'phs101420' => array(
'gene_id' => 'phs101420',
'e_value' => '1e-15',
'bit_score' => '80.9',
'alignment_length' => '269',
'identity_percentage' => '27.51',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'emh633060' => array(
'gene_id' => 'emh633060',
'e_value' => '2e-15',
'bit_score' => '82.0',
'alignment_length' => '122',
'identity_percentage' => '38.52',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh275070' => array(
'gene_id' => 'emh275070',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh530600' => array(
'gene_id' => 'emh530600',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'AP00G22010' => array(
'gene_id' => 'AP00G22010',
'e_value' => '2e-14',
'bit_score' => '78.6',
'alignment_length' => '308',
'identity_percentage' => '24.35',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'emh547740' => array(
'gene_id' => 'emh547740',
'e_value' => '3e-14',
'bit_score' => '78.6',
'alignment_length' => '226',
'identity_percentage' => '27.43',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0032671' => array(
'gene_id' => 'FBgn0032671',
'e_value' => '4e-14',
'bit_score' => '77.4',
'alignment_length' => '155',
'identity_percentage' => '31.61',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'MP10G01350' => array(
'gene_id' => 'MP10G01350',
'e_value' => '5e-13',
'bit_score' => '73.9',
'alignment_length' => '283',
'identity_percentage' => '22.97',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.07g01600' => array(
'gene_id' => 'RCC4223.07g01600',
'e_value' => '7e-13',
'bit_score' => '73.2',
'alignment_length' => '292',
'identity_percentage' => '21.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PTI_02G03790' => array(
'gene_id' => 'PTI_02G03790',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '289',
'identity_percentage' => '22.84',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'FC001G12710' => array(
'gene_id' => 'FC001G12710',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '168',
'identity_percentage' => '26.79',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_078G00010' => array(
'gene_id' => 'CNC64A_078G00010',
'e_value' => '1e-12',
'bit_score' => '72.0',
'alignment_length' => '293',
'identity_percentage' => '22.18',
'gf' => array(
[maximum depth reached]
)
),
'MP17G01870' => array(
'gene_id' => 'MP17G01870',
'e_value' => '3e-12',
'bit_score' => '72.4',
'alignment_length' => '292',
'identity_percentage' => '26.03',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ES0189G00080' => array(
'gene_id' => 'ES0189G00080',
'e_value' => '6e-12',
'bit_score' => '70.9',
'alignment_length' => '152',
'identity_percentage' => '34.87',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'emh547640' => array(
'gene_id' => 'emh547640',
'e_value' => '1e-11',
'bit_score' => '70.5',
'alignment_length' => '130',
'identity_percentage' => '38.46',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'OS01G36630' => array(
'gene_id' => 'OS01G36630',
'e_value' => '2e-11',
'bit_score' => '68.9',
'alignment_length' => '167',
'identity_percentage' => '28.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'ES0111G00300' => array(
'gene_id' => 'ES0111G00300',
'e_value' => '4e-11',
'bit_score' => '68.2',
'alignment_length' => '173',
'identity_percentage' => '32.37',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_03G07730' => array(
'gene_id' => 'MRCC299_03G07730',
'e_value' => '6e-11',
'bit_score' => '68.6',
'alignment_length' => '284',
'identity_percentage' => '25.70',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'MP05G05820' => array(
'gene_id' => 'MP05G05820',
'e_value' => '6e-11',
'bit_score' => '67.8',
'alignment_length' => '311',
'identity_percentage' => '22.19',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'TP02G05220' => array(
'gene_id' => 'TP02G05220',
'e_value' => '4e-10',
'bit_score' => '64.7',
'alignment_length' => '257',
'identity_percentage' => '25.29',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'CV00G22320' => array(
'gene_id' => 'CV00G22320',
'e_value' => '4e-10',
'bit_score' => '65.1',
'alignment_length' => '263',
'identity_percentage' => '23.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CV00G25650' => array(
'gene_id' => 'CV00G25650',
'e_value' => '5e-10',
'bit_score' => '65.5',
'alignment_length' => '311',
'identity_percentage' => '23.15',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'emh445260' => array(
'gene_id' => 'emh445260',
'e_value' => '7e-10',
'bit_score' => '63.9',
'alignment_length' => '237',
'identity_percentage' => '25.74',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'SPAC25H1.02' => array(
'gene_id' => 'SPAC25H1.02',
'e_value' => '1e-09',
'bit_score' => '63.9',
'alignment_length' => '156',
'identity_percentage' => '28.21',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_024G00200' => array(
'gene_id' => 'CNC64A_024G00200',
'e_value' => '1e-09',
'bit_score' => '62.0',
'alignment_length' => '159',
'identity_percentage' => '27.67',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'emh140980' => array(
'gene_id' => 'emh140980',
'e_value' => '2e-09',
'bit_score' => '62.8',
'alignment_length' => '240',
'identity_percentage' => '25.00',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_13G00700' => array(
'gene_id' => 'ORCC809_13G00700',
'e_value' => '1e-08',
'bit_score' => '60.8',
'alignment_length' => '284',
'identity_percentage' => '26.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'VC00G148220' => array(
'gene_id' => 'VC00G148220',
'e_value' => '4e-08',
'bit_score' => '58.2',
'alignment_length' => '171',
'identity_percentage' => '30.99',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G45250' => array(
'gene_id' => 'HE0000G45250',
'e_value' => '9e-08',
'bit_score' => '56.2',
'alignment_length' => '212',
'identity_percentage' => '24.53',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'OM_08G02020' => array(
'gene_id' => 'OM_08G02020',
'e_value' => '5e-07',
'bit_score' => '55.5',
'alignment_length' => '260',
'identity_percentage' => '25.77',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OM_02G04400' => array(
'gene_id' => 'OM_02G04400',
'e_value' => '8e-07',
'bit_score' => '54.3',
'alignment_length' => '256',
'identity_percentage' => '23.05',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00043156' => array(
'gene_id' => 'WBGene00043156',
'e_value' => '9e-07',
'bit_score' => '53.9',
'alignment_length' => '254',
'identity_percentage' => '24.02',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'OL13G02330' => array(
'gene_id' => 'OL13G02330',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'OL21G00670' => array(
'gene_id' => 'OL21G00670',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'AA0009G00660' => array(
'gene_id' => 'AA0009G00660',
'e_value' => '4e-06',
'bit_score' => '53.1',
'alignment_length' => '292',
'identity_percentage' => '23.29',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'emh768770' => array(
'gene_id' => 'emh768770',
'e_value' => '5e-06',
'bit_score' => '51.6',
'alignment_length' => '136',
'identity_percentage' => '28.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'OM_06G01440' => array(
'gene_id' => 'OM_06G01440',
'e_value' => '8e-06',
'bit_score' => '51.6',
'alignment_length' => '290',
'identity_percentage' => '23.79',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_05G02200' => array(
'gene_id' => 'MRCC299_05G02200',
'e_value' => '9e-06',
'bit_score' => '52.0',
'alignment_length' => '113',
'identity_percentage' => '26.55',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'PTI_14G01340' => array(
'gene_id' => 'PTI_14G01340',
'e_value' => '9e-06',
'bit_score' => '50.8',
'alignment_length' => '244',
'identity_percentage' => '26.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
)
),
'similarity_hits_species' => array(
'mus' => array(
(int) 0 => 'ENSMUSG00000056962'
),
'hom' => array(
(int) 0 => 'ENSG00000070495',
(int) 1 => 'ENSG00000081692'
),
'cel' => array(
(int) 0 => 'WBGene00004205',
(int) 1 => 'WBGene00043156'
),
'cvu' => array(
(int) 0 => 'CV00G00580',
(int) 1 => 'CV00G18180',
(int) 2 => 'CV00G08220',
(int) 3 => 'CV00G22320',
(int) 4 => 'CV00G25650'
),
'cre' => array(
(int) 0 => 'CR09G08380',
(int) 1 => 'CR07G03790',
(int) 2 => 'CR12G02740'
),
'mpu' => array(
(int) 0 => 'MP17G02470',
(int) 1 => 'MP16G00710',
(int) 2 => 'MP10G01350',
(int) 3 => 'MP17G01870',
(int) 4 => 'MP05G05820'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_03G08300',
(int) 1 => 'MRCC299_10G04840',
(int) 2 => 'MRCC299_06G03390',
(int) 3 => 'MRCC299_03G07730',
(int) 4 => 'MRCC299_05G02200'
),
'phs' => array(
(int) 0 => 'phs162110',
(int) 1 => 'phs158060',
(int) 2 => 'phs346580',
(int) 3 => 'phs101420'
),
'ota' => array(
(int) 0 => 'OT_18G01700',
(int) 1 => 'OT_03G03930'
),
'ome' => array(
(int) 0 => 'OM_18G00390',
(int) 1 => 'OM_09G04140',
(int) 2 => 'OM_08G02020',
(int) 3 => 'OM_02G04400',
(int) 4 => 'OM_06G01440'
),
'orcc809' => array(
(int) 0 => 'ORCC809_17G01750',
(int) 1 => 'ORCC809_06G05010',
(int) 2 => 'ORCC809_13G00700'
),
'esi' => array(
(int) 0 => 'ES0055G00320',
(int) 1 => 'ES0131G00480',
(int) 2 => 'ES0189G00200',
(int) 3 => 'ES0055G00400',
(int) 4 => 'ES0189G00080',
(int) 5 => 'ES0111G00300'
),
'olu' => array(
(int) 0 => 'OL17G01710',
(int) 1 => 'OL03G03880',
(int) 2 => 'OL13G02330',
(int) 3 => 'OL21G00670'
),
'nga' => array(
(int) 0 => 'Naga_100080g27'
),
'acg' => array(
(int) 0 => 'AC00G05760',
(int) 1 => 'AC00G44220'
),
'apr' => array(
(int) 0 => 'AP00G60980',
(int) 1 => 'AP00G18540',
(int) 2 => 'AP00G22010'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g03000',
(int) 1 => 'RCC4223.05g04450',
(int) 2 => 'RCC4223.07g01600'
),
'ptri' => array(
(int) 0 => 'PTI_12G01940',
(int) 1 => 'PTI_09G01280',
(int) 2 => 'PTI_09G03240',
(int) 3 => 'PTI_02G03790',
(int) 4 => 'PTI_14G01340'
),
'pse3' => array(
(int) 0 => 'PI00G69060',
(int) 1 => 'PI00G67060'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_18G00070',
(int) 1 => 'BPRRCC1105_09G04180'
),
'pte' => array(
(int) 0 => 'pte586860',
(int) 1 => 'pte446820',
(int) 2 => 'pte131250',
(int) 3 => 'pte622540'
),
'fcy' => array(
(int) 0 => 'FC023G02380',
(int) 1 => 'FC006G03570',
(int) 2 => 'FC005G08020',
(int) 3 => 'FC001G12710'
),
'aan' => array(
(int) 0 => 'AA0007G00410',
(int) 1 => 'AA0009G01720',
(int) 2 => 'AA0021G00550',
(int) 3 => 'AA0009G00660'
),
'ddi' => array(
(int) 0 => 'DDB_G0270006',
(int) 1 => 'DDB_G0280485'
),
'vca' => array(
(int) 0 => 'VC00G06870',
(int) 1 => 'VC00G136510',
(int) 2 => 'VC00G148220'
),
'ppa' => array(
(int) 0 => 'PP00153G00450',
(int) 1 => 'PP00080G00470',
(int) 2 => 'PP00156G00920'
),
'osa' => array(
(int) 0 => 'OS03G27250',
(int) 1 => 'OS11G36450',
(int) 2 => 'OS01G36630'
),
'emh' => array(
(int) 0 => 'emh378350',
(int) 1 => 'emh368000',
(int) 2 => 'emh532560',
(int) 3 => 'emh108900',
(int) 4 => 'emh524880',
(int) 5 => 'emh488700',
(int) 6 => 'emh104150',
(int) 7 => 'emh633060',
(int) 8 => 'emh275070',
(int) 9 => 'emh530600',
(int) 10 => 'emh547740',
(int) 11 => 'emh547640',
(int) 12 => 'emh445260',
(int) 13 => 'emh140980',
(int) 14 => 'emh768770'
),
'atr' => array(
(int) 0 => 'ATR_00038G02410',
(int) 1 => 'ATR_00004G01530',
(int) 2 => 'ATR_00085G00270'
),
'ath' => array(
(int) 0 => 'AT1G78280',
(int) 1 => 'AT5G06550',
(int) 2 => 'AT5G63080'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_008G00750',
(int) 1 => 'CNC64A_002G01380',
(int) 2 => 'CNC64A_032G00510',
(int) 3 => 'CNC64A_024G00200'
),
'ccr' => array(
(int) 0 => 'ccr164880'
),
'gsu' => array(
(int) 0 => 'gsu12560'
),
'hsp' => array(
(int) 0 => 'HE0000G21000',
(int) 1 => 'HE0000G45250'
),
'tps' => array(
(int) 0 => 'TP09G02710',
(int) 1 => 'TP02G05220'
),
'drm' => array(
(int) 0 => 'FBgn0032671'
),
'scp' => array(
(int) 0 => 'SPAC25H1.02'
)
),
'gene_id' => 'ENSMUSG00000056962',
'all_species_index' => array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'all_species' => array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'gene_family_types_information' => array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
),
'gene_family_types_configuration' => array(),
'data_identifier' => 'ENSMUSG00000056962',
'data_type' => 'gene_id',
'allow_async_use' => true,
'gene_placeholder' => 'PTI_10G00280',
'gf_placeholder' => 'HOM03P007710',
'title_for_layout' => 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
)
$allowed_extra_sequences_types = array(
'aa' => 'Protein',
'dna' => 'DNA'
)
$allowed_editing_methods = array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
)
$allowed_tree_programs = array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
)
$similarity_hits_genes = array(
'ENSMUSG00000056962' => array(
'gene_id' => 'ENSMUSG00000056962',
'e_value' => '0.0',
'bit_score' => '839',
'alignment_length' => '404',
'identity_percentage' => '100.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ENSG00000070495' => array(
'gene_id' => 'ENSG00000070495',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '403',
'identity_percentage' => '97.77',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'WBGene00004205' => array(
'gene_id' => 'WBGene00004205',
'e_value' => '5e-129',
'bit_score' => '385',
'alignment_length' => '320',
'identity_percentage' => '56.25',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'CV00G00580' => array(
'gene_id' => 'CV00G00580',
'e_value' => '1e-109',
'bit_score' => '332',
'alignment_length' => '282',
'identity_percentage' => '54.61',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'CR09G08380' => array(
'gene_id' => 'CR09G08380',
'e_value' => '3e-109',
'bit_score' => '343',
'alignment_length' => '340',
'identity_percentage' => '47.35',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'MP17G02470' => array(
'gene_id' => 'MP17G02470',
'e_value' => '5e-109',
'bit_score' => '338',
'alignment_length' => '336',
'identity_percentage' => '47.92',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'MRCC299_03G08300' => array(
'gene_id' => 'MRCC299_03G08300',
'e_value' => '2e-108',
'bit_score' => '330',
'alignment_length' => '335',
'identity_percentage' => '47.76',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'phs162110' => array(
'gene_id' => 'phs162110',
'e_value' => '4e-104',
'bit_score' => '322',
'alignment_length' => '332',
'identity_percentage' => '44.58',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OT_18G01700' => array(
'gene_id' => 'OT_18G01700',
'e_value' => '3e-100',
'bit_score' => '312',
'alignment_length' => '350',
'identity_percentage' => '44.57',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OM_18G00390' => array(
'gene_id' => 'OM_18G00390',
'e_value' => '7e-99',
'bit_score' => '308',
'alignment_length' => '340',
'identity_percentage' => '45.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ORCC809_17G01750' => array(
'gene_id' => 'ORCC809_17G01750',
'e_value' => '1e-97',
'bit_score' => '305',
'alignment_length' => '343',
'identity_percentage' => '46.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ES0055G00320' => array(
'gene_id' => 'ES0055G00320',
'e_value' => '3e-97',
'bit_score' => '305',
'alignment_length' => '350',
'identity_percentage' => '45.14',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OL17G01710' => array(
'gene_id' => 'OL17G01710',
'e_value' => '3e-97',
'bit_score' => '304',
'alignment_length' => '427',
'identity_percentage' => '41.22',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'Naga_100080g27' => array(
'gene_id' => 'Naga_100080g27',
'e_value' => '3e-95',
'bit_score' => '298',
'alignment_length' => '345',
'identity_percentage' => '44.93',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AC00G05760' => array(
'gene_id' => 'AC00G05760',
'e_value' => '4e-94',
'bit_score' => '305',
'alignment_length' => '329',
'identity_percentage' => '45.90',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AP00G60980' => array(
'gene_id' => 'AP00G60980',
'e_value' => '7e-93',
'bit_score' => '297',
'alignment_length' => '324',
'identity_percentage' => '45.37',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'RCC4223.04g03000' => array(
'gene_id' => 'RCC4223.04g03000',
'e_value' => '8e-92',
'bit_score' => '289',
'alignment_length' => '331',
'identity_percentage' => '44.71',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PTI_12G01940' => array(
'gene_id' => 'PTI_12G01940',
'e_value' => '2e-85',
'bit_score' => '273',
'alignment_length' => '355',
'identity_percentage' => '42.25',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PI00G69060' => array(
'gene_id' => 'PI00G69060',
'e_value' => '7e-85',
'bit_score' => '271',
'alignment_length' => '333',
'identity_percentage' => '43.24',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'BPRRCC1105_18G00070' => array(
'gene_id' => 'BPRRCC1105_18G00070',
'e_value' => '4e-79',
'bit_score' => '258',
'alignment_length' => '340',
'identity_percentage' => '39.71',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte586860' => array(
'gene_id' => 'pte586860',
'e_value' => '3e-75',
'bit_score' => '246',
'alignment_length' => '345',
'identity_percentage' => '36.52',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'FC023G02380' => array(
'gene_id' => 'FC023G02380',
'e_value' => '6e-75',
'bit_score' => '246',
'alignment_length' => '369',
'identity_percentage' => '37.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte446820' => array(
'gene_id' => 'pte446820',
'e_value' => '5e-74',
'bit_score' => '243',
'alignment_length' => '363',
'identity_percentage' => '38.02',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AA0007G00410' => array(
'gene_id' => 'AA0007G00410',
'e_value' => '2e-73',
'bit_score' => '238',
'alignment_length' => '293',
'identity_percentage' => '42.66',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte131250' => array(
'gene_id' => 'pte131250',
'e_value' => '2e-73',
'bit_score' => '241',
'alignment_length' => '363',
'identity_percentage' => '36.91',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'DDB_G0270006' => array(
'gene_id' => 'DDB_G0270006',
'e_value' => '2e-63',
'bit_score' => '224',
'alignment_length' => '253',
'identity_percentage' => '43.87',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'VC00G06870' => array(
'gene_id' => 'VC00G06870',
'e_value' => '4e-56',
'bit_score' => '205',
'alignment_length' => '276',
'identity_percentage' => '40.58',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'phs158060' => array(
'gene_id' => 'phs158060',
'e_value' => '2e-55',
'bit_score' => '197',
'alignment_length' => '299',
'identity_percentage' => '36.45',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PP00153G00450' => array(
'gene_id' => 'PP00153G00450',
'e_value' => '2e-55',
'bit_score' => '202',
'alignment_length' => '249',
'identity_percentage' => '42.17',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'CV00G18180' => array(
'gene_id' => 'CV00G18180',
'e_value' => '7e-55',
'bit_score' => '192',
'alignment_length' => '255',
'identity_percentage' => '40.39',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'pte622540' => array(
'gene_id' => 'pte622540',
'e_value' => '4e-54',
'bit_score' => '189',
'alignment_length' => '299',
'identity_percentage' => '35.12',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'OS03G27250' => array(
'gene_id' => 'OS03G27250',
'e_value' => '5e-54',
'bit_score' => '197',
'alignment_length' => '254',
'identity_percentage' => '42.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'emh378350' => array(
'gene_id' => 'emh378350',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'emh368000' => array(
'gene_id' => 'emh368000',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PP00080G00470' => array(
'gene_id' => 'PP00080G00470',
'e_value' => '4e-53',
'bit_score' => '195',
'alignment_length' => '249',
'identity_percentage' => '40.96',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'ATR_00038G02410' => array(
'gene_id' => 'ATR_00038G02410',
'e_value' => '6e-53',
'bit_score' => '195',
'alignment_length' => '265',
'identity_percentage' => '41.51',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'ATR_00004G01530' => array(
'gene_id' => 'ATR_00004G01530',
'e_value' => '8e-53',
'bit_score' => '189',
'alignment_length' => '252',
'identity_percentage' => '41.27',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ES0131G00480' => array(
'gene_id' => 'ES0131G00480',
'e_value' => '2e-52',
'bit_score' => '189',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ORCC809_06G05010' => array(
'gene_id' => 'ORCC809_06G05010',
'e_value' => '3e-52',
'bit_score' => '184',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'AT1G78280' => array(
'gene_id' => 'AT1G78280',
'e_value' => '4e-52',
'bit_score' => '192',
'alignment_length' => '338',
'identity_percentage' => '35.80',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'CNC64A_008G00750' => array(
'gene_id' => 'CNC64A_008G00750',
'e_value' => '2e-51',
'bit_score' => '191',
'alignment_length' => '251',
'identity_percentage' => '40.64',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OM_09G04140' => array(
'gene_id' => 'OM_09G04140',
'e_value' => '8e-51',
'bit_score' => '183',
'alignment_length' => '245',
'identity_percentage' => '40.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PTI_09G01280' => array(
'gene_id' => 'PTI_09G01280',
'e_value' => '5e-50',
'bit_score' => '180',
'alignment_length' => '267',
'identity_percentage' => '37.83',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P163203'
)
),
'AT5G06550' => array(
'gene_id' => 'AT5G06550',
'e_value' => '7e-50',
'bit_score' => '181',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ccr164880' => array(
'gene_id' => 'ccr164880',
'e_value' => '8e-50',
'bit_score' => '181',
'alignment_length' => '253',
'identity_percentage' => '38.34',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PP00156G00920' => array(
'gene_id' => 'PP00156G00920',
'e_value' => '1e-49',
'bit_score' => '182',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'OL03G03880' => array(
'gene_id' => 'OL03G03880',
'e_value' => '7e-49',
'bit_score' => '174',
'alignment_length' => '246',
'identity_percentage' => '39.84',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'OS11G36450' => array(
'gene_id' => 'OS11G36450',
'e_value' => '7e-49',
'bit_score' => '179',
'alignment_length' => '242',
'identity_percentage' => '38.02',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'VC00G136510' => array(
'gene_id' => 'VC00G136510',
'e_value' => '4e-48',
'bit_score' => '178',
'alignment_length' => '299',
'identity_percentage' => '32.44',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CR07G03790' => array(
'gene_id' => 'CR07G03790',
'e_value' => '7e-47',
'bit_score' => '178',
'alignment_length' => '250',
'identity_percentage' => '37.60',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P099027'
)
),
'OT_03G03930' => array(
'gene_id' => 'OT_03G03930',
'e_value' => '2e-46',
'bit_score' => '171',
'alignment_length' => '247',
'identity_percentage' => '39.68',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CR12G02740' => array(
'gene_id' => 'CR12G02740',
'e_value' => '1e-45',
'bit_score' => '172',
'alignment_length' => '253',
'identity_percentage' => '36.76',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PI00G67060' => array(
'gene_id' => 'PI00G67060',
'e_value' => '3e-45',
'bit_score' => '168',
'alignment_length' => '253',
'identity_percentage' => '35.57',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'RCC4223.05g04450' => array(
'gene_id' => 'RCC4223.05g04450',
'e_value' => '7e-45',
'bit_score' => '167',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'AC00G44220' => array(
'gene_id' => 'AC00G44220',
'e_value' => '5e-44',
'bit_score' => '164',
'alignment_length' => '284',
'identity_percentage' => '34.86',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'phs346580' => array(
'gene_id' => 'phs346580',
'e_value' => '2e-43',
'bit_score' => '167',
'alignment_length' => '289',
'identity_percentage' => '35.29',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P205695'
)
),
'AP00G18540' => array(
'gene_id' => 'AP00G18540',
'e_value' => '2e-42',
'bit_score' => '159',
'alignment_length' => '252',
'identity_percentage' => '34.52',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'MP16G00710' => array(
'gene_id' => 'MP16G00710',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '325',
'identity_percentage' => '31.08',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'gsu12560' => array(
'gene_id' => 'gsu12560',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '261',
'identity_percentage' => '33.72',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'HE0000G21000' => array(
'gene_id' => 'HE0000G21000',
'e_value' => '4e-36',
'bit_score' => '142',
'alignment_length' => '246',
'identity_percentage' => '34.96',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PTI_09G03240' => array(
'gene_id' => 'PTI_09G03240',
'e_value' => '1e-34',
'bit_score' => '138',
'alignment_length' => '273',
'identity_percentage' => '32.97',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ES0189G00200' => array(
'gene_id' => 'ES0189G00200',
'e_value' => '6e-34',
'bit_score' => '131',
'alignment_length' => '172',
'identity_percentage' => '38.95',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P173302'
)
),
'AA0009G01720' => array(
'gene_id' => 'AA0009G01720',
'e_value' => '6e-34',
'bit_score' => '136',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh532560' => array(
'gene_id' => 'emh532560',
'e_value' => '4e-33',
'bit_score' => '136',
'alignment_length' => '289',
'identity_percentage' => '31.49',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P154983'
)
),
'TP09G02710' => array(
'gene_id' => 'TP09G02710',
'e_value' => '3e-32',
'bit_score' => '130',
'alignment_length' => '285',
'identity_percentage' => '29.82',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CNC64A_002G01380' => array(
'gene_id' => 'CNC64A_002G01380',
'e_value' => '1e-31',
'bit_score' => '129',
'alignment_length' => '255',
'identity_percentage' => '32.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'DDB_G0280485' => array(
'gene_id' => 'DDB_G0280485',
'e_value' => '2e-30',
'bit_score' => '125',
'alignment_length' => '158',
'identity_percentage' => '41.77',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'BPRRCC1105_09G04180' => array(
'gene_id' => 'BPRRCC1105_09G04180',
'e_value' => '4e-29',
'bit_score' => '123',
'alignment_length' => '273',
'identity_percentage' => '30.77',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'FC006G03570' => array(
'gene_id' => 'FC006G03570',
'e_value' => '4e-29',
'bit_score' => '122',
'alignment_length' => '388',
'identity_percentage' => '28.09',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'MRCC299_10G04840' => array(
'gene_id' => 'MRCC299_10G04840',
'e_value' => '5e-28',
'bit_score' => '119',
'alignment_length' => '182',
'identity_percentage' => '37.91',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh108900' => array(
'gene_id' => 'emh108900',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006216',
'ORTHOFAM' => 'ORTHO03P006027'
)
),
'emh524880' => array(
'gene_id' => 'emh524880',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006216',
'ORTHOFAM' => 'ORTHO03P006027'
)
),
'emh488700' => array(
'gene_id' => 'emh488700',
'e_value' => '8e-28',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '28.27',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh104150' => array(
'gene_id' => 'emh104150',
'e_value' => '1e-27',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '27.38',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CV00G08220' => array(
'gene_id' => 'CV00G08220',
'e_value' => '6e-23',
'bit_score' => '104',
'alignment_length' => '183',
'identity_percentage' => '33.33',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P143743'
)
),
'CNC64A_032G00510' => array(
'gene_id' => 'CNC64A_032G00510',
'e_value' => '1e-21',
'bit_score' => '94.4',
'alignment_length' => '64',
'identity_percentage' => '59.38',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P111202'
)
),
'MRCC299_06G03390' => array(
'gene_id' => 'MRCC299_06G03390',
'e_value' => '3e-21',
'bit_score' => '99.0',
'alignment_length' => '305',
'identity_percentage' => '27.21',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ES0055G00400' => array(
'gene_id' => 'ES0055G00400',
'e_value' => '3e-21',
'bit_score' => '98.6',
'alignment_length' => '291',
'identity_percentage' => '29.90',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'AA0021G00550' => array(
'gene_id' => 'AA0021G00550',
'e_value' => '1e-19',
'bit_score' => '92.8',
'alignment_length' => '174',
'identity_percentage' => '36.21',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'AT5G63080' => array(
'gene_id' => 'AT5G63080',
'e_value' => '1e-19',
'bit_score' => '94.4',
'alignment_length' => '284',
'identity_percentage' => '28.87',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'FC005G08020' => array(
'gene_id' => 'FC005G08020',
'e_value' => '1e-18',
'bit_score' => '90.9',
'alignment_length' => '227',
'identity_percentage' => '29.07',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'CNC64A_078G00040' => array(
'gene_id' => 'CNC64A_078G00040',
'e_value' => '3e-17',
'bit_score' => '85.9',
'alignment_length' => '294',
'identity_percentage' => '24.83',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ENSG00000081692' => array(
'gene_id' => 'ENSG00000081692',
'e_value' => '4e-17',
'bit_score' => '86.7',
'alignment_length' => '270',
'identity_percentage' => '30.37',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ATR_00085G00270' => array(
'gene_id' => 'ATR_00085G00270',
'e_value' => '8e-16',
'bit_score' => '83.2',
'alignment_length' => '305',
'identity_percentage' => '25.90',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'phs101420' => array(
'gene_id' => 'phs101420',
'e_value' => '1e-15',
'bit_score' => '80.9',
'alignment_length' => '269',
'identity_percentage' => '27.51',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh633060' => array(
'gene_id' => 'emh633060',
'e_value' => '2e-15',
'bit_score' => '82.0',
'alignment_length' => '122',
'identity_percentage' => '38.52',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P046591'
)
),
'emh275070' => array(
'gene_id' => 'emh275070',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P050920'
)
),
'emh530600' => array(
'gene_id' => 'emh530600',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P050920'
)
),
'AP00G22010' => array(
'gene_id' => 'AP00G22010',
'e_value' => '2e-14',
'bit_score' => '78.6',
'alignment_length' => '308',
'identity_percentage' => '24.35',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh547740' => array(
'gene_id' => 'emh547740',
'e_value' => '3e-14',
'bit_score' => '78.6',
'alignment_length' => '226',
'identity_percentage' => '27.43',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'FBgn0032671' => array(
'gene_id' => 'FBgn0032671',
'e_value' => '4e-14',
'bit_score' => '77.4',
'alignment_length' => '155',
'identity_percentage' => '31.61',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'MP10G01350' => array(
'gene_id' => 'MP10G01350',
'e_value' => '5e-13',
'bit_score' => '73.9',
'alignment_length' => '283',
'identity_percentage' => '22.97',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P080670'
)
),
'RCC4223.07g01600' => array(
'gene_id' => 'RCC4223.07g01600',
'e_value' => '7e-13',
'bit_score' => '73.2',
'alignment_length' => '292',
'identity_percentage' => '21.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'PTI_02G03790' => array(
'gene_id' => 'PTI_02G03790',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '289',
'identity_percentage' => '22.84',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'FC001G12710' => array(
'gene_id' => 'FC001G12710',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '168',
'identity_percentage' => '26.79',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P039488'
)
),
'CNC64A_078G00010' => array(
'gene_id' => 'CNC64A_078G00010',
'e_value' => '1e-12',
'bit_score' => '72.0',
'alignment_length' => '293',
'identity_percentage' => '22.18',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'MP17G01870' => array(
'gene_id' => 'MP17G01870',
'e_value' => '3e-12',
'bit_score' => '72.4',
'alignment_length' => '292',
'identity_percentage' => '26.03',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'ES0189G00080' => array(
'gene_id' => 'ES0189G00080',
'e_value' => '6e-12',
'bit_score' => '70.9',
'alignment_length' => '152',
'identity_percentage' => '34.87',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh547640' => array(
'gene_id' => 'emh547640',
'e_value' => '1e-11',
'bit_score' => '70.5',
'alignment_length' => '130',
'identity_percentage' => '38.46',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P201709'
)
),
'OS01G36630' => array(
'gene_id' => 'OS01G36630',
'e_value' => '2e-11',
'bit_score' => '68.9',
'alignment_length' => '167',
'identity_percentage' => '28.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ES0111G00300' => array(
'gene_id' => 'ES0111G00300',
'e_value' => '4e-11',
'bit_score' => '68.2',
'alignment_length' => '173',
'identity_percentage' => '32.37',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'MRCC299_03G07730' => array(
'gene_id' => 'MRCC299_03G07730',
'e_value' => '6e-11',
'bit_score' => '68.6',
'alignment_length' => '284',
'identity_percentage' => '25.70',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'MP05G05820' => array(
'gene_id' => 'MP05G05820',
'e_value' => '6e-11',
'bit_score' => '67.8',
'alignment_length' => '311',
'identity_percentage' => '22.19',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'TP02G05220' => array(
'gene_id' => 'TP02G05220',
'e_value' => '4e-10',
'bit_score' => '64.7',
'alignment_length' => '257',
'identity_percentage' => '25.29',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P005795'
)
),
'CV00G22320' => array(
'gene_id' => 'CV00G22320',
'e_value' => '4e-10',
'bit_score' => '65.1',
'alignment_length' => '263',
'identity_percentage' => '23.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'CV00G25650' => array(
'gene_id' => 'CV00G25650',
'e_value' => '5e-10',
'bit_score' => '65.5',
'alignment_length' => '311',
'identity_percentage' => '23.15',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000220',
'ORTHOFAM' => 'ORTHO03P004190'
)
),
'emh445260' => array(
'gene_id' => 'emh445260',
'e_value' => '7e-10',
'bit_score' => '63.9',
'alignment_length' => '237',
'identity_percentage' => '25.74',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P019035',
'ORTHOFAM' => 'ORTHO03P043498'
)
),
'SPAC25H1.02' => array(
'gene_id' => 'SPAC25H1.02',
'e_value' => '1e-09',
'bit_score' => '63.9',
'alignment_length' => '156',
'identity_percentage' => '28.21',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'CNC64A_024G00200' => array(
'gene_id' => 'CNC64A_024G00200',
'e_value' => '1e-09',
'bit_score' => '62.0',
'alignment_length' => '159',
'identity_percentage' => '27.67',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh140980' => array(
'gene_id' => 'emh140980',
'e_value' => '2e-09',
'bit_score' => '62.8',
'alignment_length' => '240',
'identity_percentage' => '25.00',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P019035',
'ORTHOFAM' => 'ORTHO03P043498'
)
),
'ORCC809_13G00700' => array(
'gene_id' => 'ORCC809_13G00700',
'e_value' => '1e-08',
'bit_score' => '60.8',
'alignment_length' => '284',
'identity_percentage' => '26.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P001642'
)
),
'VC00G148220' => array(
'gene_id' => 'VC00G148220',
'e_value' => '4e-08',
'bit_score' => '58.2',
'alignment_length' => '171',
'identity_percentage' => '30.99',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'HE0000G45250' => array(
'gene_id' => 'HE0000G45250',
'e_value' => '9e-08',
'bit_score' => '56.2',
'alignment_length' => '212',
'identity_percentage' => '24.53',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'OM_08G02020' => array(
'gene_id' => 'OM_08G02020',
'e_value' => '5e-07',
'bit_score' => '55.5',
'alignment_length' => '260',
'identity_percentage' => '25.77',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'OM_02G04400' => array(
'gene_id' => 'OM_02G04400',
'e_value' => '8e-07',
'bit_score' => '54.3',
'alignment_length' => '256',
'identity_percentage' => '23.05',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P015173',
'ORTHOFAM' => 'ORTHO03P021123'
)
),
'WBGene00043156' => array(
'gene_id' => 'WBGene00043156',
'e_value' => '9e-07',
'bit_score' => '53.9',
'alignment_length' => '254',
'identity_percentage' => '24.02',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P006279',
'ORTHOFAM' => 'ORTHO03P005795'
)
),
'OL13G02330' => array(
'gene_id' => 'OL13G02330',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'OL21G00670' => array(
'gene_id' => 'OL21G00670',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'AA0009G00660' => array(
'gene_id' => 'AA0009G00660',
'e_value' => '4e-06',
'bit_score' => '53.1',
'alignment_length' => '292',
'identity_percentage' => '23.29',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P171442'
)
),
'emh768770' => array(
'gene_id' => 'emh768770',
'e_value' => '5e-06',
'bit_score' => '51.6',
'alignment_length' => '136',
'identity_percentage' => '28.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006948',
'ORTHOFAM' => 'ORTHO03P009850'
)
),
'OM_06G01440' => array(
'gene_id' => 'OM_06G01440',
'e_value' => '8e-06',
'bit_score' => '51.6',
'alignment_length' => '290',
'identity_percentage' => '23.79',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000536',
'ORTHOFAM' => 'ORTHO03P005579'
)
),
'MRCC299_05G02200' => array(
'gene_id' => 'MRCC299_05G02200',
'e_value' => '9e-06',
'bit_score' => '52.0',
'alignment_length' => '113',
'identity_percentage' => '26.55',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P006948',
'ORTHOFAM' => 'ORTHO03P009850'
)
),
'PTI_14G01340' => array(
'gene_id' => 'PTI_14G01340',
'e_value' => '9e-06',
'bit_score' => '50.8',
'alignment_length' => '244',
'identity_percentage' => '26.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000536',
'ORTHOFAM' => 'ORTHO03P002102'
)
)
)
$similarity_hits_species = array(
'mus' => array(
(int) 0 => 'ENSMUSG00000056962'
),
'hom' => array(
(int) 0 => 'ENSG00000070495',
(int) 1 => 'ENSG00000081692'
),
'cel' => array(
(int) 0 => 'WBGene00004205',
(int) 1 => 'WBGene00043156'
),
'cvu' => array(
(int) 0 => 'CV00G00580',
(int) 1 => 'CV00G18180',
(int) 2 => 'CV00G08220',
(int) 3 => 'CV00G22320',
(int) 4 => 'CV00G25650'
),
'cre' => array(
(int) 0 => 'CR09G08380',
(int) 1 => 'CR07G03790',
(int) 2 => 'CR12G02740'
),
'mpu' => array(
(int) 0 => 'MP17G02470',
(int) 1 => 'MP16G00710',
(int) 2 => 'MP10G01350',
(int) 3 => 'MP17G01870',
(int) 4 => 'MP05G05820'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_03G08300',
(int) 1 => 'MRCC299_10G04840',
(int) 2 => 'MRCC299_06G03390',
(int) 3 => 'MRCC299_03G07730',
(int) 4 => 'MRCC299_05G02200'
),
'phs' => array(
(int) 0 => 'phs162110',
(int) 1 => 'phs158060',
(int) 2 => 'phs346580',
(int) 3 => 'phs101420'
),
'ota' => array(
(int) 0 => 'OT_18G01700',
(int) 1 => 'OT_03G03930'
),
'ome' => array(
(int) 0 => 'OM_18G00390',
(int) 1 => 'OM_09G04140',
(int) 2 => 'OM_08G02020',
(int) 3 => 'OM_02G04400',
(int) 4 => 'OM_06G01440'
),
'orcc809' => array(
(int) 0 => 'ORCC809_17G01750',
(int) 1 => 'ORCC809_06G05010',
(int) 2 => 'ORCC809_13G00700'
),
'esi' => array(
(int) 0 => 'ES0055G00320',
(int) 1 => 'ES0131G00480',
(int) 2 => 'ES0189G00200',
(int) 3 => 'ES0055G00400',
(int) 4 => 'ES0189G00080',
(int) 5 => 'ES0111G00300'
),
'olu' => array(
(int) 0 => 'OL17G01710',
(int) 1 => 'OL03G03880',
(int) 2 => 'OL13G02330',
(int) 3 => 'OL21G00670'
),
'nga' => array(
(int) 0 => 'Naga_100080g27'
),
'acg' => array(
(int) 0 => 'AC00G05760',
(int) 1 => 'AC00G44220'
),
'apr' => array(
(int) 0 => 'AP00G60980',
(int) 1 => 'AP00G18540',
(int) 2 => 'AP00G22010'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g03000',
(int) 1 => 'RCC4223.05g04450',
(int) 2 => 'RCC4223.07g01600'
),
'ptri' => array(
(int) 0 => 'PTI_12G01940',
(int) 1 => 'PTI_09G01280',
(int) 2 => 'PTI_09G03240',
(int) 3 => 'PTI_02G03790',
(int) 4 => 'PTI_14G01340'
),
'pse3' => array(
(int) 0 => 'PI00G69060',
(int) 1 => 'PI00G67060'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_18G00070',
(int) 1 => 'BPRRCC1105_09G04180'
),
'pte' => array(
(int) 0 => 'pte586860',
(int) 1 => 'pte446820',
(int) 2 => 'pte131250',
(int) 3 => 'pte622540'
),
'fcy' => array(
(int) 0 => 'FC023G02380',
(int) 1 => 'FC006G03570',
(int) 2 => 'FC005G08020',
(int) 3 => 'FC001G12710'
),
'aan' => array(
(int) 0 => 'AA0007G00410',
(int) 1 => 'AA0009G01720',
(int) 2 => 'AA0021G00550',
(int) 3 => 'AA0009G00660'
),
'ddi' => array(
(int) 0 => 'DDB_G0270006',
(int) 1 => 'DDB_G0280485'
),
'vca' => array(
(int) 0 => 'VC00G06870',
(int) 1 => 'VC00G136510',
(int) 2 => 'VC00G148220'
),
'ppa' => array(
(int) 0 => 'PP00153G00450',
(int) 1 => 'PP00080G00470',
(int) 2 => 'PP00156G00920'
),
'osa' => array(
(int) 0 => 'OS03G27250',
(int) 1 => 'OS11G36450',
(int) 2 => 'OS01G36630'
),
'emh' => array(
(int) 0 => 'emh378350',
(int) 1 => 'emh368000',
(int) 2 => 'emh532560',
(int) 3 => 'emh108900',
(int) 4 => 'emh524880',
(int) 5 => 'emh488700',
(int) 6 => 'emh104150',
(int) 7 => 'emh633060',
(int) 8 => 'emh275070',
(int) 9 => 'emh530600',
(int) 10 => 'emh547740',
(int) 11 => 'emh547640',
(int) 12 => 'emh445260',
(int) 13 => 'emh140980',
(int) 14 => 'emh768770'
),
'atr' => array(
(int) 0 => 'ATR_00038G02410',
(int) 1 => 'ATR_00004G01530',
(int) 2 => 'ATR_00085G00270'
),
'ath' => array(
(int) 0 => 'AT1G78280',
(int) 1 => 'AT5G06550',
(int) 2 => 'AT5G63080'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_008G00750',
(int) 1 => 'CNC64A_002G01380',
(int) 2 => 'CNC64A_032G00510',
(int) 3 => 'CNC64A_024G00200'
),
'ccr' => array(
(int) 0 => 'ccr164880'
),
'gsu' => array(
(int) 0 => 'gsu12560'
),
'hsp' => array(
(int) 0 => 'HE0000G21000',
(int) 1 => 'HE0000G45250'
),
'tps' => array(
(int) 0 => 'TP09G02710',
(int) 1 => 'TP02G05220'
),
'drm' => array(
(int) 0 => 'FBgn0032671'
),
'scp' => array(
(int) 0 => 'SPAC25H1.02'
)
)
$gene_id = 'ENSMUSG00000056962'
$all_species_index = array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$all_species = array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$gene_family_types_information = array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
)
$gene_family_types_configuration = array()
$data_identifier = 'ENSMUSG00000056962'
$data_type = 'gene_id'
$allow_async_use = true
$gene_placeholder = 'PTI_10G00280'
$gf_placeholder = 'HOM03P007710'
$title_for_layout = 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
$collapse1 = ''
$collapse2 = 'collapse in'
$similarity_hit = array(
'gene_id' => 'CNC64A_078G00010',
'e_value' => '1e-12',
'bit_score' => '72.0',
'alignment_length' => '293',
'identity_percentage' => '22.18',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
)
$checked = null
$similarity_hit_gene = 'CNC64A_078G00010'
include - APP/View/Analysis/custom_tree_creation.ctp, line 169
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::render() - CORE/Cake/View/View.php, line 473
Controller::render() - CORE/Cake/Controller/Controller.php, line 963
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167
[main] - APP/webroot/index.php, line 146
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]Code Context echo "<td><input type='checkbox' name='selected_genes[]' value='".$similarity_hit['gene_id']."' ".$checked." /></td>\n";
echo "<td>".$this->Html->link($similarity_hit_gene,array("controller"=>"genes","action"=>"view",$similarity_hit_gene),array("target"=>"_blank"))."</td>\n";
echo "<td>".$this->Html->link($similarity_hit['common_name'],array("controller"=>"organism","action"=>"view",urlencode($similarity_hit['common_name'])))."</td>\n";
$viewFile = '/xtras/group/biocomp/plaza/versions/plaza_pico_03/app/View/Analysis/custom_tree_creation.ctp'
$dataForView = array(
'allowed_extra_sequences_types' => array(
'aa' => 'Protein',
'dna' => 'DNA'
),
'allowed_editing_methods' => array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
),
'allowed_tree_programs' => array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
),
'allowed_msa_programs' => array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
),
'allowed_number_blasthits' => array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
),
'similarity_hits_genes' => array(
'ENSMUSG00000056962' => array(
'gene_id' => 'ENSMUSG00000056962',
'e_value' => '0.0',
'bit_score' => '839',
'alignment_length' => '404',
'identity_percentage' => '100.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000070495' => array(
'gene_id' => 'ENSG00000070495',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '403',
'identity_percentage' => '97.77',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00004205' => array(
'gene_id' => 'WBGene00004205',
'e_value' => '5e-129',
'bit_score' => '385',
'alignment_length' => '320',
'identity_percentage' => '56.25',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'CV00G00580' => array(
'gene_id' => 'CV00G00580',
'e_value' => '1e-109',
'bit_score' => '332',
'alignment_length' => '282',
'identity_percentage' => '54.61',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CR09G08380' => array(
'gene_id' => 'CR09G08380',
'e_value' => '3e-109',
'bit_score' => '343',
'alignment_length' => '340',
'identity_percentage' => '47.35',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'MP17G02470' => array(
'gene_id' => 'MP17G02470',
'e_value' => '5e-109',
'bit_score' => '338',
'alignment_length' => '336',
'identity_percentage' => '47.92',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_03G08300' => array(
'gene_id' => 'MRCC299_03G08300',
'e_value' => '2e-108',
'bit_score' => '330',
'alignment_length' => '335',
'identity_percentage' => '47.76',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'phs162110' => array(
'gene_id' => 'phs162110',
'e_value' => '4e-104',
'bit_score' => '322',
'alignment_length' => '332',
'identity_percentage' => '44.58',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'OT_18G01700' => array(
'gene_id' => 'OT_18G01700',
'e_value' => '3e-100',
'bit_score' => '312',
'alignment_length' => '350',
'identity_percentage' => '44.57',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OM_18G00390' => array(
'gene_id' => 'OM_18G00390',
'e_value' => '7e-99',
'bit_score' => '308',
'alignment_length' => '340',
'identity_percentage' => '45.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_17G01750' => array(
'gene_id' => 'ORCC809_17G01750',
'e_value' => '1e-97',
'bit_score' => '305',
'alignment_length' => '343',
'identity_percentage' => '46.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'ES0055G00320' => array(
'gene_id' => 'ES0055G00320',
'e_value' => '3e-97',
'bit_score' => '305',
'alignment_length' => '350',
'identity_percentage' => '45.14',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'OL17G01710' => array(
'gene_id' => 'OL17G01710',
'e_value' => '3e-97',
'bit_score' => '304',
'alignment_length' => '427',
'identity_percentage' => '41.22',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100080g27' => array(
'gene_id' => 'Naga_100080g27',
'e_value' => '3e-95',
'bit_score' => '298',
'alignment_length' => '345',
'identity_percentage' => '44.93',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'AC00G05760' => array(
'gene_id' => 'AC00G05760',
'e_value' => '4e-94',
'bit_score' => '305',
'alignment_length' => '329',
'identity_percentage' => '45.90',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'AP00G60980' => array(
'gene_id' => 'AP00G60980',
'e_value' => '7e-93',
'bit_score' => '297',
'alignment_length' => '324',
'identity_percentage' => '45.37',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.04g03000' => array(
'gene_id' => 'RCC4223.04g03000',
'e_value' => '8e-92',
'bit_score' => '289',
'alignment_length' => '331',
'identity_percentage' => '44.71',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PTI_12G01940' => array(
'gene_id' => 'PTI_12G01940',
'e_value' => '2e-85',
'bit_score' => '273',
'alignment_length' => '355',
'identity_percentage' => '42.25',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'PI00G69060' => array(
'gene_id' => 'PI00G69060',
'e_value' => '7e-85',
'bit_score' => '271',
'alignment_length' => '333',
'identity_percentage' => '43.24',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_18G00070' => array(
'gene_id' => 'BPRRCC1105_18G00070',
'e_value' => '4e-79',
'bit_score' => '258',
'alignment_length' => '340',
'identity_percentage' => '39.71',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'pte586860' => array(
'gene_id' => 'pte586860',
'e_value' => '3e-75',
'bit_score' => '246',
'alignment_length' => '345',
'identity_percentage' => '36.52',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'FC023G02380' => array(
'gene_id' => 'FC023G02380',
'e_value' => '6e-75',
'bit_score' => '246',
'alignment_length' => '369',
'identity_percentage' => '37.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'pte446820' => array(
'gene_id' => 'pte446820',
'e_value' => '5e-74',
'bit_score' => '243',
'alignment_length' => '363',
'identity_percentage' => '38.02',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'AA0007G00410' => array(
'gene_id' => 'AA0007G00410',
'e_value' => '2e-73',
'bit_score' => '238',
'alignment_length' => '293',
'identity_percentage' => '42.66',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'pte131250' => array(
'gene_id' => 'pte131250',
'e_value' => '2e-73',
'bit_score' => '241',
'alignment_length' => '363',
'identity_percentage' => '36.91',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0270006' => array(
'gene_id' => 'DDB_G0270006',
'e_value' => '2e-63',
'bit_score' => '224',
'alignment_length' => '253',
'identity_percentage' => '43.87',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'VC00G06870' => array(
'gene_id' => 'VC00G06870',
'e_value' => '4e-56',
'bit_score' => '205',
'alignment_length' => '276',
'identity_percentage' => '40.58',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'phs158060' => array(
'gene_id' => 'phs158060',
'e_value' => '2e-55',
'bit_score' => '197',
'alignment_length' => '299',
'identity_percentage' => '36.45',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'PP00153G00450' => array(
'gene_id' => 'PP00153G00450',
'e_value' => '2e-55',
'bit_score' => '202',
'alignment_length' => '249',
'identity_percentage' => '42.17',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CV00G18180' => array(
'gene_id' => 'CV00G18180',
'e_value' => '7e-55',
'bit_score' => '192',
'alignment_length' => '255',
'identity_percentage' => '40.39',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'pte622540' => array(
'gene_id' => 'pte622540',
'e_value' => '4e-54',
'bit_score' => '189',
'alignment_length' => '299',
'identity_percentage' => '35.12',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'OS03G27250' => array(
'gene_id' => 'OS03G27250',
'e_value' => '5e-54',
'bit_score' => '197',
'alignment_length' => '254',
'identity_percentage' => '42.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'emh378350' => array(
'gene_id' => 'emh378350',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh368000' => array(
'gene_id' => 'emh368000',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'PP00080G00470' => array(
'gene_id' => 'PP00080G00470',
'e_value' => '4e-53',
'bit_score' => '195',
'alignment_length' => '249',
'identity_percentage' => '40.96',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00038G02410' => array(
'gene_id' => 'ATR_00038G02410',
'e_value' => '6e-53',
'bit_score' => '195',
'alignment_length' => '265',
'identity_percentage' => '41.51',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00004G01530' => array(
'gene_id' => 'ATR_00004G01530',
'e_value' => '8e-53',
'bit_score' => '189',
'alignment_length' => '252',
'identity_percentage' => '41.27',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'ES0131G00480' => array(
'gene_id' => 'ES0131G00480',
'e_value' => '2e-52',
'bit_score' => '189',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_06G05010' => array(
'gene_id' => 'ORCC809_06G05010',
'e_value' => '3e-52',
'bit_score' => '184',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'AT1G78280' => array(
'gene_id' => 'AT1G78280',
'e_value' => '4e-52',
'bit_score' => '192',
'alignment_length' => '338',
'identity_percentage' => '35.80',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_008G00750' => array(
'gene_id' => 'CNC64A_008G00750',
'e_value' => '2e-51',
'bit_score' => '191',
'alignment_length' => '251',
'identity_percentage' => '40.64',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'OM_09G04140' => array(
'gene_id' => 'OM_09G04140',
'e_value' => '8e-51',
'bit_score' => '183',
'alignment_length' => '245',
'identity_percentage' => '40.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'PTI_09G01280' => array(
'gene_id' => 'PTI_09G01280',
'e_value' => '5e-50',
'bit_score' => '180',
'alignment_length' => '267',
'identity_percentage' => '37.83',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'AT5G06550' => array(
'gene_id' => 'AT5G06550',
'e_value' => '7e-50',
'bit_score' => '181',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ccr164880' => array(
'gene_id' => 'ccr164880',
'e_value' => '8e-50',
'bit_score' => '181',
'alignment_length' => '253',
'identity_percentage' => '38.34',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'PP00156G00920' => array(
'gene_id' => 'PP00156G00920',
'e_value' => '1e-49',
'bit_score' => '182',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OL03G03880' => array(
'gene_id' => 'OL03G03880',
'e_value' => '7e-49',
'bit_score' => '174',
'alignment_length' => '246',
'identity_percentage' => '39.84',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'OS11G36450' => array(
'gene_id' => 'OS11G36450',
'e_value' => '7e-49',
'bit_score' => '179',
'alignment_length' => '242',
'identity_percentage' => '38.02',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'VC00G136510' => array(
'gene_id' => 'VC00G136510',
'e_value' => '4e-48',
'bit_score' => '178',
'alignment_length' => '299',
'identity_percentage' => '32.44',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CR07G03790' => array(
'gene_id' => 'CR07G03790',
'e_value' => '7e-47',
'bit_score' => '178',
'alignment_length' => '250',
'identity_percentage' => '37.60',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OT_03G03930' => array(
'gene_id' => 'OT_03G03930',
'e_value' => '2e-46',
'bit_score' => '171',
'alignment_length' => '247',
'identity_percentage' => '39.68',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'CR12G02740' => array(
'gene_id' => 'CR12G02740',
'e_value' => '1e-45',
'bit_score' => '172',
'alignment_length' => '253',
'identity_percentage' => '36.76',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'PI00G67060' => array(
'gene_id' => 'PI00G67060',
'e_value' => '3e-45',
'bit_score' => '168',
'alignment_length' => '253',
'identity_percentage' => '35.57',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.05g04450' => array(
'gene_id' => 'RCC4223.05g04450',
'e_value' => '7e-45',
'bit_score' => '167',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'AC00G44220' => array(
'gene_id' => 'AC00G44220',
'e_value' => '5e-44',
'bit_score' => '164',
'alignment_length' => '284',
'identity_percentage' => '34.86',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'phs346580' => array(
'gene_id' => 'phs346580',
'e_value' => '2e-43',
'bit_score' => '167',
'alignment_length' => '289',
'identity_percentage' => '35.29',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'AP00G18540' => array(
'gene_id' => 'AP00G18540',
'e_value' => '2e-42',
'bit_score' => '159',
'alignment_length' => '252',
'identity_percentage' => '34.52',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'MP16G00710' => array(
'gene_id' => 'MP16G00710',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '325',
'identity_percentage' => '31.08',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'gsu12560' => array(
'gene_id' => 'gsu12560',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '261',
'identity_percentage' => '33.72',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G21000' => array(
'gene_id' => 'HE0000G21000',
'e_value' => '4e-36',
'bit_score' => '142',
'alignment_length' => '246',
'identity_percentage' => '34.96',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'PTI_09G03240' => array(
'gene_id' => 'PTI_09G03240',
'e_value' => '1e-34',
'bit_score' => '138',
'alignment_length' => '273',
'identity_percentage' => '32.97',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'ES0189G00200' => array(
'gene_id' => 'ES0189G00200',
'e_value' => '6e-34',
'bit_score' => '131',
'alignment_length' => '172',
'identity_percentage' => '38.95',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'AA0009G01720' => array(
'gene_id' => 'AA0009G01720',
'e_value' => '6e-34',
'bit_score' => '136',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'emh532560' => array(
'gene_id' => 'emh532560',
'e_value' => '4e-33',
'bit_score' => '136',
'alignment_length' => '289',
'identity_percentage' => '31.49',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'TP09G02710' => array(
'gene_id' => 'TP09G02710',
'e_value' => '3e-32',
'bit_score' => '130',
'alignment_length' => '285',
'identity_percentage' => '29.82',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_002G01380' => array(
'gene_id' => 'CNC64A_002G01380',
'e_value' => '1e-31',
'bit_score' => '129',
'alignment_length' => '255',
'identity_percentage' => '32.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0280485' => array(
'gene_id' => 'DDB_G0280485',
'e_value' => '2e-30',
'bit_score' => '125',
'alignment_length' => '158',
'identity_percentage' => '41.77',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_09G04180' => array(
'gene_id' => 'BPRRCC1105_09G04180',
'e_value' => '4e-29',
'bit_score' => '123',
'alignment_length' => '273',
'identity_percentage' => '30.77',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'FC006G03570' => array(
'gene_id' => 'FC006G03570',
'e_value' => '4e-29',
'bit_score' => '122',
'alignment_length' => '388',
'identity_percentage' => '28.09',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_10G04840' => array(
'gene_id' => 'MRCC299_10G04840',
'e_value' => '5e-28',
'bit_score' => '119',
'alignment_length' => '182',
'identity_percentage' => '37.91',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'emh108900' => array(
'gene_id' => 'emh108900',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh524880' => array(
'gene_id' => 'emh524880',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh488700' => array(
'gene_id' => 'emh488700',
'e_value' => '8e-28',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '28.27',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh104150' => array(
'gene_id' => 'emh104150',
'e_value' => '1e-27',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '27.38',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'CV00G08220' => array(
'gene_id' => 'CV00G08220',
'e_value' => '6e-23',
'bit_score' => '104',
'alignment_length' => '183',
'identity_percentage' => '33.33',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_032G00510' => array(
'gene_id' => 'CNC64A_032G00510',
'e_value' => '1e-21',
'bit_score' => '94.4',
'alignment_length' => '64',
'identity_percentage' => '59.38',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_06G03390' => array(
'gene_id' => 'MRCC299_06G03390',
'e_value' => '3e-21',
'bit_score' => '99.0',
'alignment_length' => '305',
'identity_percentage' => '27.21',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'ES0055G00400' => array(
'gene_id' => 'ES0055G00400',
'e_value' => '3e-21',
'bit_score' => '98.6',
'alignment_length' => '291',
'identity_percentage' => '29.90',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'AA0021G00550' => array(
'gene_id' => 'AA0021G00550',
'e_value' => '1e-19',
'bit_score' => '92.8',
'alignment_length' => '174',
'identity_percentage' => '36.21',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'AT5G63080' => array(
'gene_id' => 'AT5G63080',
'e_value' => '1e-19',
'bit_score' => '94.4',
'alignment_length' => '284',
'identity_percentage' => '28.87',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'FC005G08020' => array(
'gene_id' => 'FC005G08020',
'e_value' => '1e-18',
'bit_score' => '90.9',
'alignment_length' => '227',
'identity_percentage' => '29.07',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_078G00040' => array(
'gene_id' => 'CNC64A_078G00040',
'e_value' => '3e-17',
'bit_score' => '85.9',
'alignment_length' => '294',
'identity_percentage' => '24.83',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000081692' => array(
'gene_id' => 'ENSG00000081692',
'e_value' => '4e-17',
'bit_score' => '86.7',
'alignment_length' => '270',
'identity_percentage' => '30.37',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00085G00270' => array(
'gene_id' => 'ATR_00085G00270',
'e_value' => '8e-16',
'bit_score' => '83.2',
'alignment_length' => '305',
'identity_percentage' => '25.90',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'phs101420' => array(
'gene_id' => 'phs101420',
'e_value' => '1e-15',
'bit_score' => '80.9',
'alignment_length' => '269',
'identity_percentage' => '27.51',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'emh633060' => array(
'gene_id' => 'emh633060',
'e_value' => '2e-15',
'bit_score' => '82.0',
'alignment_length' => '122',
'identity_percentage' => '38.52',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh275070' => array(
'gene_id' => 'emh275070',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh530600' => array(
'gene_id' => 'emh530600',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'AP00G22010' => array(
'gene_id' => 'AP00G22010',
'e_value' => '2e-14',
'bit_score' => '78.6',
'alignment_length' => '308',
'identity_percentage' => '24.35',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'emh547740' => array(
'gene_id' => 'emh547740',
'e_value' => '3e-14',
'bit_score' => '78.6',
'alignment_length' => '226',
'identity_percentage' => '27.43',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0032671' => array(
'gene_id' => 'FBgn0032671',
'e_value' => '4e-14',
'bit_score' => '77.4',
'alignment_length' => '155',
'identity_percentage' => '31.61',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'MP10G01350' => array(
'gene_id' => 'MP10G01350',
'e_value' => '5e-13',
'bit_score' => '73.9',
'alignment_length' => '283',
'identity_percentage' => '22.97',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.07g01600' => array(
'gene_id' => 'RCC4223.07g01600',
'e_value' => '7e-13',
'bit_score' => '73.2',
'alignment_length' => '292',
'identity_percentage' => '21.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PTI_02G03790' => array(
'gene_id' => 'PTI_02G03790',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '289',
'identity_percentage' => '22.84',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'FC001G12710' => array(
'gene_id' => 'FC001G12710',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '168',
'identity_percentage' => '26.79',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_078G00010' => array(
'gene_id' => 'CNC64A_078G00010',
'e_value' => '1e-12',
'bit_score' => '72.0',
'alignment_length' => '293',
'identity_percentage' => '22.18',
'gf' => array(
[maximum depth reached]
)
),
'MP17G01870' => array(
'gene_id' => 'MP17G01870',
'e_value' => '3e-12',
'bit_score' => '72.4',
'alignment_length' => '292',
'identity_percentage' => '26.03',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ES0189G00080' => array(
'gene_id' => 'ES0189G00080',
'e_value' => '6e-12',
'bit_score' => '70.9',
'alignment_length' => '152',
'identity_percentage' => '34.87',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'emh547640' => array(
'gene_id' => 'emh547640',
'e_value' => '1e-11',
'bit_score' => '70.5',
'alignment_length' => '130',
'identity_percentage' => '38.46',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'OS01G36630' => array(
'gene_id' => 'OS01G36630',
'e_value' => '2e-11',
'bit_score' => '68.9',
'alignment_length' => '167',
'identity_percentage' => '28.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'ES0111G00300' => array(
'gene_id' => 'ES0111G00300',
'e_value' => '4e-11',
'bit_score' => '68.2',
'alignment_length' => '173',
'identity_percentage' => '32.37',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_03G07730' => array(
'gene_id' => 'MRCC299_03G07730',
'e_value' => '6e-11',
'bit_score' => '68.6',
'alignment_length' => '284',
'identity_percentage' => '25.70',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'MP05G05820' => array(
'gene_id' => 'MP05G05820',
'e_value' => '6e-11',
'bit_score' => '67.8',
'alignment_length' => '311',
'identity_percentage' => '22.19',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'TP02G05220' => array(
'gene_id' => 'TP02G05220',
'e_value' => '4e-10',
'bit_score' => '64.7',
'alignment_length' => '257',
'identity_percentage' => '25.29',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'CV00G22320' => array(
'gene_id' => 'CV00G22320',
'e_value' => '4e-10',
'bit_score' => '65.1',
'alignment_length' => '263',
'identity_percentage' => '23.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CV00G25650' => array(
'gene_id' => 'CV00G25650',
'e_value' => '5e-10',
'bit_score' => '65.5',
'alignment_length' => '311',
'identity_percentage' => '23.15',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'emh445260' => array(
'gene_id' => 'emh445260',
'e_value' => '7e-10',
'bit_score' => '63.9',
'alignment_length' => '237',
'identity_percentage' => '25.74',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'SPAC25H1.02' => array(
'gene_id' => 'SPAC25H1.02',
'e_value' => '1e-09',
'bit_score' => '63.9',
'alignment_length' => '156',
'identity_percentage' => '28.21',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_024G00200' => array(
'gene_id' => 'CNC64A_024G00200',
'e_value' => '1e-09',
'bit_score' => '62.0',
'alignment_length' => '159',
'identity_percentage' => '27.67',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'emh140980' => array(
'gene_id' => 'emh140980',
'e_value' => '2e-09',
'bit_score' => '62.8',
'alignment_length' => '240',
'identity_percentage' => '25.00',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_13G00700' => array(
'gene_id' => 'ORCC809_13G00700',
'e_value' => '1e-08',
'bit_score' => '60.8',
'alignment_length' => '284',
'identity_percentage' => '26.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'VC00G148220' => array(
'gene_id' => 'VC00G148220',
'e_value' => '4e-08',
'bit_score' => '58.2',
'alignment_length' => '171',
'identity_percentage' => '30.99',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G45250' => array(
'gene_id' => 'HE0000G45250',
'e_value' => '9e-08',
'bit_score' => '56.2',
'alignment_length' => '212',
'identity_percentage' => '24.53',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'OM_08G02020' => array(
'gene_id' => 'OM_08G02020',
'e_value' => '5e-07',
'bit_score' => '55.5',
'alignment_length' => '260',
'identity_percentage' => '25.77',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OM_02G04400' => array(
'gene_id' => 'OM_02G04400',
'e_value' => '8e-07',
'bit_score' => '54.3',
'alignment_length' => '256',
'identity_percentage' => '23.05',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00043156' => array(
'gene_id' => 'WBGene00043156',
'e_value' => '9e-07',
'bit_score' => '53.9',
'alignment_length' => '254',
'identity_percentage' => '24.02',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'OL13G02330' => array(
'gene_id' => 'OL13G02330',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'OL21G00670' => array(
'gene_id' => 'OL21G00670',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'AA0009G00660' => array(
'gene_id' => 'AA0009G00660',
'e_value' => '4e-06',
'bit_score' => '53.1',
'alignment_length' => '292',
'identity_percentage' => '23.29',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'emh768770' => array(
'gene_id' => 'emh768770',
'e_value' => '5e-06',
'bit_score' => '51.6',
'alignment_length' => '136',
'identity_percentage' => '28.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'OM_06G01440' => array(
'gene_id' => 'OM_06G01440',
'e_value' => '8e-06',
'bit_score' => '51.6',
'alignment_length' => '290',
'identity_percentage' => '23.79',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_05G02200' => array(
'gene_id' => 'MRCC299_05G02200',
'e_value' => '9e-06',
'bit_score' => '52.0',
'alignment_length' => '113',
'identity_percentage' => '26.55',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'PTI_14G01340' => array(
'gene_id' => 'PTI_14G01340',
'e_value' => '9e-06',
'bit_score' => '50.8',
'alignment_length' => '244',
'identity_percentage' => '26.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
)
),
'similarity_hits_species' => array(
'mus' => array(
(int) 0 => 'ENSMUSG00000056962'
),
'hom' => array(
(int) 0 => 'ENSG00000070495',
(int) 1 => 'ENSG00000081692'
),
'cel' => array(
(int) 0 => 'WBGene00004205',
(int) 1 => 'WBGene00043156'
),
'cvu' => array(
(int) 0 => 'CV00G00580',
(int) 1 => 'CV00G18180',
(int) 2 => 'CV00G08220',
(int) 3 => 'CV00G22320',
(int) 4 => 'CV00G25650'
),
'cre' => array(
(int) 0 => 'CR09G08380',
(int) 1 => 'CR07G03790',
(int) 2 => 'CR12G02740'
),
'mpu' => array(
(int) 0 => 'MP17G02470',
(int) 1 => 'MP16G00710',
(int) 2 => 'MP10G01350',
(int) 3 => 'MP17G01870',
(int) 4 => 'MP05G05820'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_03G08300',
(int) 1 => 'MRCC299_10G04840',
(int) 2 => 'MRCC299_06G03390',
(int) 3 => 'MRCC299_03G07730',
(int) 4 => 'MRCC299_05G02200'
),
'phs' => array(
(int) 0 => 'phs162110',
(int) 1 => 'phs158060',
(int) 2 => 'phs346580',
(int) 3 => 'phs101420'
),
'ota' => array(
(int) 0 => 'OT_18G01700',
(int) 1 => 'OT_03G03930'
),
'ome' => array(
(int) 0 => 'OM_18G00390',
(int) 1 => 'OM_09G04140',
(int) 2 => 'OM_08G02020',
(int) 3 => 'OM_02G04400',
(int) 4 => 'OM_06G01440'
),
'orcc809' => array(
(int) 0 => 'ORCC809_17G01750',
(int) 1 => 'ORCC809_06G05010',
(int) 2 => 'ORCC809_13G00700'
),
'esi' => array(
(int) 0 => 'ES0055G00320',
(int) 1 => 'ES0131G00480',
(int) 2 => 'ES0189G00200',
(int) 3 => 'ES0055G00400',
(int) 4 => 'ES0189G00080',
(int) 5 => 'ES0111G00300'
),
'olu' => array(
(int) 0 => 'OL17G01710',
(int) 1 => 'OL03G03880',
(int) 2 => 'OL13G02330',
(int) 3 => 'OL21G00670'
),
'nga' => array(
(int) 0 => 'Naga_100080g27'
),
'acg' => array(
(int) 0 => 'AC00G05760',
(int) 1 => 'AC00G44220'
),
'apr' => array(
(int) 0 => 'AP00G60980',
(int) 1 => 'AP00G18540',
(int) 2 => 'AP00G22010'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g03000',
(int) 1 => 'RCC4223.05g04450',
(int) 2 => 'RCC4223.07g01600'
),
'ptri' => array(
(int) 0 => 'PTI_12G01940',
(int) 1 => 'PTI_09G01280',
(int) 2 => 'PTI_09G03240',
(int) 3 => 'PTI_02G03790',
(int) 4 => 'PTI_14G01340'
),
'pse3' => array(
(int) 0 => 'PI00G69060',
(int) 1 => 'PI00G67060'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_18G00070',
(int) 1 => 'BPRRCC1105_09G04180'
),
'pte' => array(
(int) 0 => 'pte586860',
(int) 1 => 'pte446820',
(int) 2 => 'pte131250',
(int) 3 => 'pte622540'
),
'fcy' => array(
(int) 0 => 'FC023G02380',
(int) 1 => 'FC006G03570',
(int) 2 => 'FC005G08020',
(int) 3 => 'FC001G12710'
),
'aan' => array(
(int) 0 => 'AA0007G00410',
(int) 1 => 'AA0009G01720',
(int) 2 => 'AA0021G00550',
(int) 3 => 'AA0009G00660'
),
'ddi' => array(
(int) 0 => 'DDB_G0270006',
(int) 1 => 'DDB_G0280485'
),
'vca' => array(
(int) 0 => 'VC00G06870',
(int) 1 => 'VC00G136510',
(int) 2 => 'VC00G148220'
),
'ppa' => array(
(int) 0 => 'PP00153G00450',
(int) 1 => 'PP00080G00470',
(int) 2 => 'PP00156G00920'
),
'osa' => array(
(int) 0 => 'OS03G27250',
(int) 1 => 'OS11G36450',
(int) 2 => 'OS01G36630'
),
'emh' => array(
(int) 0 => 'emh378350',
(int) 1 => 'emh368000',
(int) 2 => 'emh532560',
(int) 3 => 'emh108900',
(int) 4 => 'emh524880',
(int) 5 => 'emh488700',
(int) 6 => 'emh104150',
(int) 7 => 'emh633060',
(int) 8 => 'emh275070',
(int) 9 => 'emh530600',
(int) 10 => 'emh547740',
(int) 11 => 'emh547640',
(int) 12 => 'emh445260',
(int) 13 => 'emh140980',
(int) 14 => 'emh768770'
),
'atr' => array(
(int) 0 => 'ATR_00038G02410',
(int) 1 => 'ATR_00004G01530',
(int) 2 => 'ATR_00085G00270'
),
'ath' => array(
(int) 0 => 'AT1G78280',
(int) 1 => 'AT5G06550',
(int) 2 => 'AT5G63080'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_008G00750',
(int) 1 => 'CNC64A_002G01380',
(int) 2 => 'CNC64A_032G00510',
(int) 3 => 'CNC64A_024G00200'
),
'ccr' => array(
(int) 0 => 'ccr164880'
),
'gsu' => array(
(int) 0 => 'gsu12560'
),
'hsp' => array(
(int) 0 => 'HE0000G21000',
(int) 1 => 'HE0000G45250'
),
'tps' => array(
(int) 0 => 'TP09G02710',
(int) 1 => 'TP02G05220'
),
'drm' => array(
(int) 0 => 'FBgn0032671'
),
'scp' => array(
(int) 0 => 'SPAC25H1.02'
)
),
'gene_id' => 'ENSMUSG00000056962',
'all_species_index' => array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'all_species' => array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'gene_family_types_information' => array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
),
'gene_family_types_configuration' => array(),
'data_identifier' => 'ENSMUSG00000056962',
'data_type' => 'gene_id',
'allow_async_use' => true,
'gene_placeholder' => 'PTI_10G00280',
'gf_placeholder' => 'HOM03P007710',
'title_for_layout' => 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
)
$allowed_extra_sequences_types = array(
'aa' => 'Protein',
'dna' => 'DNA'
)
$allowed_editing_methods = array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
)
$allowed_tree_programs = array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
)
$similarity_hits_genes = array(
'ENSMUSG00000056962' => array(
'gene_id' => 'ENSMUSG00000056962',
'e_value' => '0.0',
'bit_score' => '839',
'alignment_length' => '404',
'identity_percentage' => '100.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ENSG00000070495' => array(
'gene_id' => 'ENSG00000070495',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '403',
'identity_percentage' => '97.77',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'WBGene00004205' => array(
'gene_id' => 'WBGene00004205',
'e_value' => '5e-129',
'bit_score' => '385',
'alignment_length' => '320',
'identity_percentage' => '56.25',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'CV00G00580' => array(
'gene_id' => 'CV00G00580',
'e_value' => '1e-109',
'bit_score' => '332',
'alignment_length' => '282',
'identity_percentage' => '54.61',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'CR09G08380' => array(
'gene_id' => 'CR09G08380',
'e_value' => '3e-109',
'bit_score' => '343',
'alignment_length' => '340',
'identity_percentage' => '47.35',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'MP17G02470' => array(
'gene_id' => 'MP17G02470',
'e_value' => '5e-109',
'bit_score' => '338',
'alignment_length' => '336',
'identity_percentage' => '47.92',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'MRCC299_03G08300' => array(
'gene_id' => 'MRCC299_03G08300',
'e_value' => '2e-108',
'bit_score' => '330',
'alignment_length' => '335',
'identity_percentage' => '47.76',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'phs162110' => array(
'gene_id' => 'phs162110',
'e_value' => '4e-104',
'bit_score' => '322',
'alignment_length' => '332',
'identity_percentage' => '44.58',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OT_18G01700' => array(
'gene_id' => 'OT_18G01700',
'e_value' => '3e-100',
'bit_score' => '312',
'alignment_length' => '350',
'identity_percentage' => '44.57',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OM_18G00390' => array(
'gene_id' => 'OM_18G00390',
'e_value' => '7e-99',
'bit_score' => '308',
'alignment_length' => '340',
'identity_percentage' => '45.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ORCC809_17G01750' => array(
'gene_id' => 'ORCC809_17G01750',
'e_value' => '1e-97',
'bit_score' => '305',
'alignment_length' => '343',
'identity_percentage' => '46.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'ES0055G00320' => array(
'gene_id' => 'ES0055G00320',
'e_value' => '3e-97',
'bit_score' => '305',
'alignment_length' => '350',
'identity_percentage' => '45.14',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OL17G01710' => array(
'gene_id' => 'OL17G01710',
'e_value' => '3e-97',
'bit_score' => '304',
'alignment_length' => '427',
'identity_percentage' => '41.22',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'Naga_100080g27' => array(
'gene_id' => 'Naga_100080g27',
'e_value' => '3e-95',
'bit_score' => '298',
'alignment_length' => '345',
'identity_percentage' => '44.93',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AC00G05760' => array(
'gene_id' => 'AC00G05760',
'e_value' => '4e-94',
'bit_score' => '305',
'alignment_length' => '329',
'identity_percentage' => '45.90',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AP00G60980' => array(
'gene_id' => 'AP00G60980',
'e_value' => '7e-93',
'bit_score' => '297',
'alignment_length' => '324',
'identity_percentage' => '45.37',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'RCC4223.04g03000' => array(
'gene_id' => 'RCC4223.04g03000',
'e_value' => '8e-92',
'bit_score' => '289',
'alignment_length' => '331',
'identity_percentage' => '44.71',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PTI_12G01940' => array(
'gene_id' => 'PTI_12G01940',
'e_value' => '2e-85',
'bit_score' => '273',
'alignment_length' => '355',
'identity_percentage' => '42.25',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PI00G69060' => array(
'gene_id' => 'PI00G69060',
'e_value' => '7e-85',
'bit_score' => '271',
'alignment_length' => '333',
'identity_percentage' => '43.24',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'BPRRCC1105_18G00070' => array(
'gene_id' => 'BPRRCC1105_18G00070',
'e_value' => '4e-79',
'bit_score' => '258',
'alignment_length' => '340',
'identity_percentage' => '39.71',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte586860' => array(
'gene_id' => 'pte586860',
'e_value' => '3e-75',
'bit_score' => '246',
'alignment_length' => '345',
'identity_percentage' => '36.52',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'FC023G02380' => array(
'gene_id' => 'FC023G02380',
'e_value' => '6e-75',
'bit_score' => '246',
'alignment_length' => '369',
'identity_percentage' => '37.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte446820' => array(
'gene_id' => 'pte446820',
'e_value' => '5e-74',
'bit_score' => '243',
'alignment_length' => '363',
'identity_percentage' => '38.02',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'AA0007G00410' => array(
'gene_id' => 'AA0007G00410',
'e_value' => '2e-73',
'bit_score' => '238',
'alignment_length' => '293',
'identity_percentage' => '42.66',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'pte131250' => array(
'gene_id' => 'pte131250',
'e_value' => '2e-73',
'bit_score' => '241',
'alignment_length' => '363',
'identity_percentage' => '36.91',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'DDB_G0270006' => array(
'gene_id' => 'DDB_G0270006',
'e_value' => '2e-63',
'bit_score' => '224',
'alignment_length' => '253',
'identity_percentage' => '43.87',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'VC00G06870' => array(
'gene_id' => 'VC00G06870',
'e_value' => '4e-56',
'bit_score' => '205',
'alignment_length' => '276',
'identity_percentage' => '40.58',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'phs158060' => array(
'gene_id' => 'phs158060',
'e_value' => '2e-55',
'bit_score' => '197',
'alignment_length' => '299',
'identity_percentage' => '36.45',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PP00153G00450' => array(
'gene_id' => 'PP00153G00450',
'e_value' => '2e-55',
'bit_score' => '202',
'alignment_length' => '249',
'identity_percentage' => '42.17',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'CV00G18180' => array(
'gene_id' => 'CV00G18180',
'e_value' => '7e-55',
'bit_score' => '192',
'alignment_length' => '255',
'identity_percentage' => '40.39',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'pte622540' => array(
'gene_id' => 'pte622540',
'e_value' => '4e-54',
'bit_score' => '189',
'alignment_length' => '299',
'identity_percentage' => '35.12',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'OS03G27250' => array(
'gene_id' => 'OS03G27250',
'e_value' => '5e-54',
'bit_score' => '197',
'alignment_length' => '254',
'identity_percentage' => '42.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'emh378350' => array(
'gene_id' => 'emh378350',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'emh368000' => array(
'gene_id' => 'emh368000',
'e_value' => '1e-53',
'bit_score' => '185',
'alignment_length' => '237',
'identity_percentage' => '41.77',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'PP00080G00470' => array(
'gene_id' => 'PP00080G00470',
'e_value' => '4e-53',
'bit_score' => '195',
'alignment_length' => '249',
'identity_percentage' => '40.96',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'ATR_00038G02410' => array(
'gene_id' => 'ATR_00038G02410',
'e_value' => '6e-53',
'bit_score' => '195',
'alignment_length' => '265',
'identity_percentage' => '41.51',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'ATR_00004G01530' => array(
'gene_id' => 'ATR_00004G01530',
'e_value' => '8e-53',
'bit_score' => '189',
'alignment_length' => '252',
'identity_percentage' => '41.27',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ES0131G00480' => array(
'gene_id' => 'ES0131G00480',
'e_value' => '2e-52',
'bit_score' => '189',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ORCC809_06G05010' => array(
'gene_id' => 'ORCC809_06G05010',
'e_value' => '3e-52',
'bit_score' => '184',
'alignment_length' => '255',
'identity_percentage' => '40.78',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'AT1G78280' => array(
'gene_id' => 'AT1G78280',
'e_value' => '4e-52',
'bit_score' => '192',
'alignment_length' => '338',
'identity_percentage' => '35.80',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P015356'
)
),
'CNC64A_008G00750' => array(
'gene_id' => 'CNC64A_008G00750',
'e_value' => '2e-51',
'bit_score' => '191',
'alignment_length' => '251',
'identity_percentage' => '40.64',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002441'
)
),
'OM_09G04140' => array(
'gene_id' => 'OM_09G04140',
'e_value' => '8e-51',
'bit_score' => '183',
'alignment_length' => '245',
'identity_percentage' => '40.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PTI_09G01280' => array(
'gene_id' => 'PTI_09G01280',
'e_value' => '5e-50',
'bit_score' => '180',
'alignment_length' => '267',
'identity_percentage' => '37.83',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P163203'
)
),
'AT5G06550' => array(
'gene_id' => 'AT5G06550',
'e_value' => '7e-50',
'bit_score' => '181',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ccr164880' => array(
'gene_id' => 'ccr164880',
'e_value' => '8e-50',
'bit_score' => '181',
'alignment_length' => '253',
'identity_percentage' => '38.34',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PP00156G00920' => array(
'gene_id' => 'PP00156G00920',
'e_value' => '1e-49',
'bit_score' => '182',
'alignment_length' => '252',
'identity_percentage' => '39.68',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'OL03G03880' => array(
'gene_id' => 'OL03G03880',
'e_value' => '7e-49',
'bit_score' => '174',
'alignment_length' => '246',
'identity_percentage' => '39.84',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'OS11G36450' => array(
'gene_id' => 'OS11G36450',
'e_value' => '7e-49',
'bit_score' => '179',
'alignment_length' => '242',
'identity_percentage' => '38.02',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'VC00G136510' => array(
'gene_id' => 'VC00G136510',
'e_value' => '4e-48',
'bit_score' => '178',
'alignment_length' => '299',
'identity_percentage' => '32.44',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CR07G03790' => array(
'gene_id' => 'CR07G03790',
'e_value' => '7e-47',
'bit_score' => '178',
'alignment_length' => '250',
'identity_percentage' => '37.60',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P099027'
)
),
'OT_03G03930' => array(
'gene_id' => 'OT_03G03930',
'e_value' => '2e-46',
'bit_score' => '171',
'alignment_length' => '247',
'identity_percentage' => '39.68',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CR12G02740' => array(
'gene_id' => 'CR12G02740',
'e_value' => '1e-45',
'bit_score' => '172',
'alignment_length' => '253',
'identity_percentage' => '36.76',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PI00G67060' => array(
'gene_id' => 'PI00G67060',
'e_value' => '3e-45',
'bit_score' => '168',
'alignment_length' => '253',
'identity_percentage' => '35.57',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'RCC4223.05g04450' => array(
'gene_id' => 'RCC4223.05g04450',
'e_value' => '7e-45',
'bit_score' => '167',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'AC00G44220' => array(
'gene_id' => 'AC00G44220',
'e_value' => '5e-44',
'bit_score' => '164',
'alignment_length' => '284',
'identity_percentage' => '34.86',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'phs346580' => array(
'gene_id' => 'phs346580',
'e_value' => '2e-43',
'bit_score' => '167',
'alignment_length' => '289',
'identity_percentage' => '35.29',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P205695'
)
),
'AP00G18540' => array(
'gene_id' => 'AP00G18540',
'e_value' => '2e-42',
'bit_score' => '159',
'alignment_length' => '252',
'identity_percentage' => '34.52',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'MP16G00710' => array(
'gene_id' => 'MP16G00710',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '325',
'identity_percentage' => '31.08',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'gsu12560' => array(
'gene_id' => 'gsu12560',
'e_value' => '2e-38',
'bit_score' => '149',
'alignment_length' => '261',
'identity_percentage' => '33.72',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'HE0000G21000' => array(
'gene_id' => 'HE0000G21000',
'e_value' => '4e-36',
'bit_score' => '142',
'alignment_length' => '246',
'identity_percentage' => '34.96',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'PTI_09G03240' => array(
'gene_id' => 'PTI_09G03240',
'e_value' => '1e-34',
'bit_score' => '138',
'alignment_length' => '273',
'identity_percentage' => '32.97',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'ES0189G00200' => array(
'gene_id' => 'ES0189G00200',
'e_value' => '6e-34',
'bit_score' => '131',
'alignment_length' => '172',
'identity_percentage' => '38.95',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P173302'
)
),
'AA0009G01720' => array(
'gene_id' => 'AA0009G01720',
'e_value' => '6e-34',
'bit_score' => '136',
'alignment_length' => '253',
'identity_percentage' => '35.18',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh532560' => array(
'gene_id' => 'emh532560',
'e_value' => '4e-33',
'bit_score' => '136',
'alignment_length' => '289',
'identity_percentage' => '31.49',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P154983'
)
),
'TP09G02710' => array(
'gene_id' => 'TP09G02710',
'e_value' => '3e-32',
'bit_score' => '130',
'alignment_length' => '285',
'identity_percentage' => '29.82',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CNC64A_002G01380' => array(
'gene_id' => 'CNC64A_002G01380',
'e_value' => '1e-31',
'bit_score' => '129',
'alignment_length' => '255',
'identity_percentage' => '32.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'DDB_G0280485' => array(
'gene_id' => 'DDB_G0280485',
'e_value' => '2e-30',
'bit_score' => '125',
'alignment_length' => '158',
'identity_percentage' => '41.77',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'BPRRCC1105_09G04180' => array(
'gene_id' => 'BPRRCC1105_09G04180',
'e_value' => '4e-29',
'bit_score' => '123',
'alignment_length' => '273',
'identity_percentage' => '30.77',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'FC006G03570' => array(
'gene_id' => 'FC006G03570',
'e_value' => '4e-29',
'bit_score' => '122',
'alignment_length' => '388',
'identity_percentage' => '28.09',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'MRCC299_10G04840' => array(
'gene_id' => 'MRCC299_10G04840',
'e_value' => '5e-28',
'bit_score' => '119',
'alignment_length' => '182',
'identity_percentage' => '37.91',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh108900' => array(
'gene_id' => 'emh108900',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006216',
'ORTHOFAM' => 'ORTHO03P006027'
)
),
'emh524880' => array(
'gene_id' => 'emh524880',
'e_value' => '7e-28',
'bit_score' => '119',
'alignment_length' => '243',
'identity_percentage' => '30.86',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006216',
'ORTHOFAM' => 'ORTHO03P006027'
)
),
'emh488700' => array(
'gene_id' => 'emh488700',
'e_value' => '8e-28',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '28.27',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'emh104150' => array(
'gene_id' => 'emh104150',
'e_value' => '1e-27',
'bit_score' => '117',
'alignment_length' => '336',
'identity_percentage' => '27.38',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P002349'
)
),
'CV00G08220' => array(
'gene_id' => 'CV00G08220',
'e_value' => '6e-23',
'bit_score' => '104',
'alignment_length' => '183',
'identity_percentage' => '33.33',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P143743'
)
),
'CNC64A_032G00510' => array(
'gene_id' => 'CNC64A_032G00510',
'e_value' => '1e-21',
'bit_score' => '94.4',
'alignment_length' => '64',
'identity_percentage' => '59.38',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P111202'
)
),
'MRCC299_06G03390' => array(
'gene_id' => 'MRCC299_06G03390',
'e_value' => '3e-21',
'bit_score' => '99.0',
'alignment_length' => '305',
'identity_percentage' => '27.21',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ES0055G00400' => array(
'gene_id' => 'ES0055G00400',
'e_value' => '3e-21',
'bit_score' => '98.6',
'alignment_length' => '291',
'identity_percentage' => '29.90',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'AA0021G00550' => array(
'gene_id' => 'AA0021G00550',
'e_value' => '1e-19',
'bit_score' => '92.8',
'alignment_length' => '174',
'identity_percentage' => '36.21',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'AT5G63080' => array(
'gene_id' => 'AT5G63080',
'e_value' => '1e-19',
'bit_score' => '94.4',
'alignment_length' => '284',
'identity_percentage' => '28.87',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'FC005G08020' => array(
'gene_id' => 'FC005G08020',
'e_value' => '1e-18',
'bit_score' => '90.9',
'alignment_length' => '227',
'identity_percentage' => '29.07',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P042483'
)
),
'CNC64A_078G00040' => array(
'gene_id' => 'CNC64A_078G00040',
'e_value' => '3e-17',
'bit_score' => '85.9',
'alignment_length' => '294',
'identity_percentage' => '24.83',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ENSG00000081692' => array(
'gene_id' => 'ENSG00000081692',
'e_value' => '4e-17',
'bit_score' => '86.7',
'alignment_length' => '270',
'identity_percentage' => '30.37',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ATR_00085G00270' => array(
'gene_id' => 'ATR_00085G00270',
'e_value' => '8e-16',
'bit_score' => '83.2',
'alignment_length' => '305',
'identity_percentage' => '25.90',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'phs101420' => array(
'gene_id' => 'phs101420',
'e_value' => '1e-15',
'bit_score' => '80.9',
'alignment_length' => '269',
'identity_percentage' => '27.51',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh633060' => array(
'gene_id' => 'emh633060',
'e_value' => '2e-15',
'bit_score' => '82.0',
'alignment_length' => '122',
'identity_percentage' => '38.52',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P046591'
)
),
'emh275070' => array(
'gene_id' => 'emh275070',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P050920'
)
),
'emh530600' => array(
'gene_id' => 'emh530600',
'e_value' => '4e-15',
'bit_score' => '77.8',
'alignment_length' => '234',
'identity_percentage' => '27.35',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P050920'
)
),
'AP00G22010' => array(
'gene_id' => 'AP00G22010',
'e_value' => '2e-14',
'bit_score' => '78.6',
'alignment_length' => '308',
'identity_percentage' => '24.35',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh547740' => array(
'gene_id' => 'emh547740',
'e_value' => '3e-14',
'bit_score' => '78.6',
'alignment_length' => '226',
'identity_percentage' => '27.43',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'FBgn0032671' => array(
'gene_id' => 'FBgn0032671',
'e_value' => '4e-14',
'bit_score' => '77.4',
'alignment_length' => '155',
'identity_percentage' => '31.61',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'MP10G01350' => array(
'gene_id' => 'MP10G01350',
'e_value' => '5e-13',
'bit_score' => '73.9',
'alignment_length' => '283',
'identity_percentage' => '22.97',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P080670'
)
),
'RCC4223.07g01600' => array(
'gene_id' => 'RCC4223.07g01600',
'e_value' => '7e-13',
'bit_score' => '73.2',
'alignment_length' => '292',
'identity_percentage' => '21.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'PTI_02G03790' => array(
'gene_id' => 'PTI_02G03790',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '289',
'identity_percentage' => '22.84',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'FC001G12710' => array(
'gene_id' => 'FC001G12710',
'e_value' => '1e-12',
'bit_score' => '73.6',
'alignment_length' => '168',
'identity_percentage' => '26.79',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P039488'
)
),
'CNC64A_078G00010' => array(
'gene_id' => 'CNC64A_078G00010',
'e_value' => '1e-12',
'bit_score' => '72.0',
'alignment_length' => '293',
'identity_percentage' => '22.18',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'MP17G01870' => array(
'gene_id' => 'MP17G01870',
'e_value' => '3e-12',
'bit_score' => '72.4',
'alignment_length' => '292',
'identity_percentage' => '26.03',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'ES0189G00080' => array(
'gene_id' => 'ES0189G00080',
'e_value' => '6e-12',
'bit_score' => '70.9',
'alignment_length' => '152',
'identity_percentage' => '34.87',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh547640' => array(
'gene_id' => 'emh547640',
'e_value' => '1e-11',
'bit_score' => '70.5',
'alignment_length' => '130',
'identity_percentage' => '38.46',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P201709'
)
),
'OS01G36630' => array(
'gene_id' => 'OS01G36630',
'e_value' => '2e-11',
'bit_score' => '68.9',
'alignment_length' => '167',
'identity_percentage' => '28.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'ES0111G00300' => array(
'gene_id' => 'ES0111G00300',
'e_value' => '4e-11',
'bit_score' => '68.2',
'alignment_length' => '173',
'identity_percentage' => '32.37',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'MRCC299_03G07730' => array(
'gene_id' => 'MRCC299_03G07730',
'e_value' => '6e-11',
'bit_score' => '68.6',
'alignment_length' => '284',
'identity_percentage' => '25.70',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P027317'
)
),
'MP05G05820' => array(
'gene_id' => 'MP05G05820',
'e_value' => '6e-11',
'bit_score' => '67.8',
'alignment_length' => '311',
'identity_percentage' => '22.19',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'TP02G05220' => array(
'gene_id' => 'TP02G05220',
'e_value' => '4e-10',
'bit_score' => '64.7',
'alignment_length' => '257',
'identity_percentage' => '25.29',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000558',
'ORTHOFAM' => 'ORTHO03P005795'
)
),
'CV00G22320' => array(
'gene_id' => 'CV00G22320',
'e_value' => '4e-10',
'bit_score' => '65.1',
'alignment_length' => '263',
'identity_percentage' => '23.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'CV00G25650' => array(
'gene_id' => 'CV00G25650',
'e_value' => '5e-10',
'bit_score' => '65.5',
'alignment_length' => '311',
'identity_percentage' => '23.15',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000220',
'ORTHOFAM' => 'ORTHO03P004190'
)
),
'emh445260' => array(
'gene_id' => 'emh445260',
'e_value' => '7e-10',
'bit_score' => '63.9',
'alignment_length' => '237',
'identity_percentage' => '25.74',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P019035',
'ORTHOFAM' => 'ORTHO03P043498'
)
),
'SPAC25H1.02' => array(
'gene_id' => 'SPAC25H1.02',
'e_value' => '1e-09',
'bit_score' => '63.9',
'alignment_length' => '156',
'identity_percentage' => '28.21',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'CNC64A_024G00200' => array(
'gene_id' => 'CNC64A_024G00200',
'e_value' => '1e-09',
'bit_score' => '62.0',
'alignment_length' => '159',
'identity_percentage' => '27.67',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'emh140980' => array(
'gene_id' => 'emh140980',
'e_value' => '2e-09',
'bit_score' => '62.8',
'alignment_length' => '240',
'identity_percentage' => '25.00',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P019035',
'ORTHOFAM' => 'ORTHO03P043498'
)
),
'ORCC809_13G00700' => array(
'gene_id' => 'ORCC809_13G00700',
'e_value' => '1e-08',
'bit_score' => '60.8',
'alignment_length' => '284',
'identity_percentage' => '26.06',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P001642'
)
),
'VC00G148220' => array(
'gene_id' => 'VC00G148220',
'e_value' => '4e-08',
'bit_score' => '58.2',
'alignment_length' => '171',
'identity_percentage' => '30.99',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'HE0000G45250' => array(
'gene_id' => 'HE0000G45250',
'e_value' => '9e-08',
'bit_score' => '56.2',
'alignment_length' => '212',
'identity_percentage' => '24.53',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
),
'OM_08G02020' => array(
'gene_id' => 'OM_08G02020',
'e_value' => '5e-07',
'bit_score' => '55.5',
'alignment_length' => '260',
'identity_percentage' => '25.77',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'OM_02G04400' => array(
'gene_id' => 'OM_02G04400',
'e_value' => '8e-07',
'bit_score' => '54.3',
'alignment_length' => '256',
'identity_percentage' => '23.05',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P015173',
'ORTHOFAM' => 'ORTHO03P021123'
)
),
'WBGene00043156' => array(
'gene_id' => 'WBGene00043156',
'e_value' => '9e-07',
'bit_score' => '53.9',
'alignment_length' => '254',
'identity_percentage' => '24.02',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P006279',
'ORTHOFAM' => 'ORTHO03P005795'
)
),
'OL13G02330' => array(
'gene_id' => 'OL13G02330',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'OL21G00670' => array(
'gene_id' => 'OL21G00670',
'e_value' => '1e-06',
'bit_score' => '54.3',
'alignment_length' => '271',
'identity_percentage' => '25.09',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P013921'
)
),
'AA0009G00660' => array(
'gene_id' => 'AA0009G00660',
'e_value' => '4e-06',
'bit_score' => '53.1',
'alignment_length' => '292',
'identity_percentage' => '23.29',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P006129',
'ORTHOFAM' => 'ORTHO03P171442'
)
),
'emh768770' => array(
'gene_id' => 'emh768770',
'e_value' => '5e-06',
'bit_score' => '51.6',
'alignment_length' => '136',
'identity_percentage' => '28.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P006948',
'ORTHOFAM' => 'ORTHO03P009850'
)
),
'OM_06G01440' => array(
'gene_id' => 'OM_06G01440',
'e_value' => '8e-06',
'bit_score' => '51.6',
'alignment_length' => '290',
'identity_percentage' => '23.79',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000536',
'ORTHOFAM' => 'ORTHO03P005579'
)
),
'MRCC299_05G02200' => array(
'gene_id' => 'MRCC299_05G02200',
'e_value' => '9e-06',
'bit_score' => '52.0',
'alignment_length' => '113',
'identity_percentage' => '26.55',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P006948',
'ORTHOFAM' => 'ORTHO03P009850'
)
),
'PTI_14G01340' => array(
'gene_id' => 'PTI_14G01340',
'e_value' => '9e-06',
'bit_score' => '50.8',
'alignment_length' => '244',
'identity_percentage' => '26.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000536',
'ORTHOFAM' => 'ORTHO03P002102'
)
)
)
$similarity_hits_species = array(
'mus' => array(
(int) 0 => 'ENSMUSG00000056962'
),
'hom' => array(
(int) 0 => 'ENSG00000070495',
(int) 1 => 'ENSG00000081692'
),
'cel' => array(
(int) 0 => 'WBGene00004205',
(int) 1 => 'WBGene00043156'
),
'cvu' => array(
(int) 0 => 'CV00G00580',
(int) 1 => 'CV00G18180',
(int) 2 => 'CV00G08220',
(int) 3 => 'CV00G22320',
(int) 4 => 'CV00G25650'
),
'cre' => array(
(int) 0 => 'CR09G08380',
(int) 1 => 'CR07G03790',
(int) 2 => 'CR12G02740'
),
'mpu' => array(
(int) 0 => 'MP17G02470',
(int) 1 => 'MP16G00710',
(int) 2 => 'MP10G01350',
(int) 3 => 'MP17G01870',
(int) 4 => 'MP05G05820'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_03G08300',
(int) 1 => 'MRCC299_10G04840',
(int) 2 => 'MRCC299_06G03390',
(int) 3 => 'MRCC299_03G07730',
(int) 4 => 'MRCC299_05G02200'
),
'phs' => array(
(int) 0 => 'phs162110',
(int) 1 => 'phs158060',
(int) 2 => 'phs346580',
(int) 3 => 'phs101420'
),
'ota' => array(
(int) 0 => 'OT_18G01700',
(int) 1 => 'OT_03G03930'
),
'ome' => array(
(int) 0 => 'OM_18G00390',
(int) 1 => 'OM_09G04140',
(int) 2 => 'OM_08G02020',
(int) 3 => 'OM_02G04400',
(int) 4 => 'OM_06G01440'
),
'orcc809' => array(
(int) 0 => 'ORCC809_17G01750',
(int) 1 => 'ORCC809_06G05010',
(int) 2 => 'ORCC809_13G00700'
),
'esi' => array(
(int) 0 => 'ES0055G00320',
(int) 1 => 'ES0131G00480',
(int) 2 => 'ES0189G00200',
(int) 3 => 'ES0055G00400',
(int) 4 => 'ES0189G00080',
(int) 5 => 'ES0111G00300'
),
'olu' => array(
(int) 0 => 'OL17G01710',
(int) 1 => 'OL03G03880',
(int) 2 => 'OL13G02330',
(int) 3 => 'OL21G00670'
),
'nga' => array(
(int) 0 => 'Naga_100080g27'
),
'acg' => array(
(int) 0 => 'AC00G05760',
(int) 1 => 'AC00G44220'
),
'apr' => array(
(int) 0 => 'AP00G60980',
(int) 1 => 'AP00G18540',
(int) 2 => 'AP00G22010'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g03000',
(int) 1 => 'RCC4223.05g04450',
(int) 2 => 'RCC4223.07g01600'
),
'ptri' => array(
(int) 0 => 'PTI_12G01940',
(int) 1 => 'PTI_09G01280',
(int) 2 => 'PTI_09G03240',
(int) 3 => 'PTI_02G03790',
(int) 4 => 'PTI_14G01340'
),
'pse3' => array(
(int) 0 => 'PI00G69060',
(int) 1 => 'PI00G67060'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_18G00070',
(int) 1 => 'BPRRCC1105_09G04180'
),
'pte' => array(
(int) 0 => 'pte586860',
(int) 1 => 'pte446820',
(int) 2 => 'pte131250',
(int) 3 => 'pte622540'
),
'fcy' => array(
(int) 0 => 'FC023G02380',
(int) 1 => 'FC006G03570',
(int) 2 => 'FC005G08020',
(int) 3 => 'FC001G12710'
),
'aan' => array(
(int) 0 => 'AA0007G00410',
(int) 1 => 'AA0009G01720',
(int) 2 => 'AA0021G00550',
(int) 3 => 'AA0009G00660'
),
'ddi' => array(
(int) 0 => 'DDB_G0270006',
(int) 1 => 'DDB_G0280485'
),
'vca' => array(
(int) 0 => 'VC00G06870',
(int) 1 => 'VC00G136510',
(int) 2 => 'VC00G148220'
),
'ppa' => array(
(int) 0 => 'PP00153G00450',
(int) 1 => 'PP00080G00470',
(int) 2 => 'PP00156G00920'
),
'osa' => array(
(int) 0 => 'OS03G27250',
(int) 1 => 'OS11G36450',
(int) 2 => 'OS01G36630'
),
'emh' => array(
(int) 0 => 'emh378350',
(int) 1 => 'emh368000',
(int) 2 => 'emh532560',
(int) 3 => 'emh108900',
(int) 4 => 'emh524880',
(int) 5 => 'emh488700',
(int) 6 => 'emh104150',
(int) 7 => 'emh633060',
(int) 8 => 'emh275070',
(int) 9 => 'emh530600',
(int) 10 => 'emh547740',
(int) 11 => 'emh547640',
(int) 12 => 'emh445260',
(int) 13 => 'emh140980',
(int) 14 => 'emh768770'
),
'atr' => array(
(int) 0 => 'ATR_00038G02410',
(int) 1 => 'ATR_00004G01530',
(int) 2 => 'ATR_00085G00270'
),
'ath' => array(
(int) 0 => 'AT1G78280',
(int) 1 => 'AT5G06550',
(int) 2 => 'AT5G63080'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_008G00750',
(int) 1 => 'CNC64A_002G01380',
(int) 2 => 'CNC64A_032G00510',
(int) 3 => 'CNC64A_024G00200'
),
'ccr' => array(
(int) 0 => 'ccr164880'
),
'gsu' => array(
(int) 0 => 'gsu12560'
),
'hsp' => array(
(int) 0 => 'HE0000G21000',
(int) 1 => 'HE0000G45250'
),
'tps' => array(
(int) 0 => 'TP09G02710',
(int) 1 => 'TP02G05220'
),
'drm' => array(
(int) 0 => 'FBgn0032671'
),
'scp' => array(
(int) 0 => 'SPAC25H1.02'
)
)
$gene_id = 'ENSMUSG00000056962'
$all_species_index = array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$all_species = array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$gene_family_types_information = array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
)
$gene_family_types_configuration = array()
$data_identifier = 'ENSMUSG00000056962'
$data_type = 'gene_id'
$allow_async_use = true
$gene_placeholder = 'PTI_10G00280'
$gf_placeholder = 'HOM03P007710'
$title_for_layout = 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
$collapse1 = ''
$collapse2 = 'collapse in'
$similarity_hit = array(
'gene_id' => 'CNC64A_078G00010',
'e_value' => '1e-12',
'bit_score' => '72.0',
'alignment_length' => '293',
'identity_percentage' => '22.18',
'gf' => array(
'HOMFAM' => 'HOM03P003544',
'ORTHOFAM' => 'ORTHO03P003353'
)
)
$checked = null
$similarity_hit_gene = 'CNC64A_078G00010'
include - APP/View/Analysis/custom_tree_creation.ctp, line 169
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::render() - CORE/Cake/View/View.php, line 473
Controller::render() - CORE/Cake/Controller/Controller.php, line 963
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167
[main] - APP/webroot/index.php, line 146
|
1e-12 |
72.0 |
293 |
22.18 |