Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00077G00800	Amborella trichopoda	0.0	977	476	100.00
AT2G40690	Arabidopsis thaliana	0.0	587	390	75.38
PP00304G00240	Physcomitrella patens	0.0	535	395	66.84
PP00139G00070	Physcomitrella patens	0.0	535	364	70.60
MRCC299_11G01160	Micromonas sp RCC299	1e-159	463	351	65.24
MP08G04900	Micromonas pusilla strain CCMP1545	2e-158	465	364	63.74
OT_04G03970	Ostreococcus tauri	3e-153	449	365	61.10
BPRRCC1105_08G03320	Bathycoccus prasinos	4e-152	449	367	61.85
OL04G03810	Ostreococcus lucimarinus	5e-152	444	351	63.25
OS07G12640	Oryza sativa	1e-151	439	247	87.85
OM_02G04200	Ostreococcus mediterraneus	1e-151	444	367	61.58
ORCC809_04G01420	Ostreococcus sp RCC809	2e-147	432	351	61.82
CV00G43430	Coccomyxa subellipsoidea C-169	4e-139	410	328	61.89
RCC4223.15g01590	Picochlorum_RCC4223	1e-138	415	366	57.10
PI00G48780	Picochlorum sp. SENEW3 (SE3)	3e-138	413	365	56.16
VC00G136900	Volvox carteri	8e-138	413	363	55.65
AC00G21170	Asterochloris sp. Cgr-DA1pho v2.0	1e-136	405	335	61.19
AP00G12090	Auxenochlorella protothecoides	2e-135	406	398	53.77
CR12G03160	Chlamydomonas reinhardtii	1e-134	400	351	56.70
CNC64A_011G01870	Chlorella sp NC64A	2e-122	374	378	52.12
ccr11340	Chondrus crispus	7e-96	302	330	49.39
gsu88950	Galdieria sulphuraria	9e-87	279	337	43.92
Naga_100217g6	Nannochloropsis gaditana	4e-86	278	335	48.06
PTI_01G07100	Phaeodactylum tricornutum	2e-85	275	333	43.24
CM18G04760	Cyanidioschyzon merolae	3e-85	275	356	44.38
FC002G04040	Fragilariopsis cylindrus	5e-85	273	336	43.45
TP01G04110	Thalassiosira pseudonana	3e-83	268	335	42.99
OT_01G03840	Ostreococcus tauri	4e-83	268	346	44.80
gsu88970	Galdieria sulphuraria	7e-83	269	354	41.81
ORCC809_01G02730	Ostreococcus sp RCC809	2e-77	253	342	43.27
OL01G04030	Ostreococcus lucimarinus	9e-77	251	335	43.28
ES0240G00080	Ectocarpus siliculosus	8e-73	248	333	43.54
OM_01G02920	Ostreococcus mediterraneus	4e-71	237	331	43.20
emh476570	Emiliania huxleyi	4e-70	232	333	45.35
HE0000G30980	Helicosporidium sp.	3e-69	231	342	42.40
pte470320	Paramecium tetraurelia	8e-68	227	325	37.85
BPRRCC1105_01G04140	Bathycoccus prasinos	2e-67	227	346	39.60
CR09G04960	Chlamydomonas reinhardtii	1e-66	228	331	40.48
AP00G45520	Auxenochlorella protothecoides	4e-66	223	329	40.73
CV00G43050	Coccomyxa subellipsoidea C-169	9e-66	222	339	39.82
AC00G74500	Asterochloris sp. Cgr-DA1pho v2.0	5e-65	219	293	41.64
PI00G11900	Picochlorum sp. SENEW3 (SE3)	2e-63	215	312	41.03
RCC4223.11g00280	Picochlorum_RCC4223	2e-63	215	333	38.44
phs381870	Phytophtora sojae	8e-63	214	329	39.51
CNC64A_004G04610	Chlorella sp NC64A	2e-62	213	300	41.67
ES0339G00090	Ectocarpus siliculosus	6e-62	212	338	39.05
TP03G08050	Thalassiosira pseudonana	6e-57	197	330	39.09
PTI_00G03280	Phaeodactylum tricornutum	2e-54	194	342	35.96
PP06035G00010	Physcomitrella patens	1e-38	145	229	34.93
OS01G74000	Oryza sativa	2e-36	142	342	32.16
HE0000G19850	Helicosporidium sp.	1e-33	128	119	52.10
PP00099G00230	Physcomitrella patens	3e-32	131	344	30.81
ATR_00049G01100	Amborella trichopoda	2e-31	128	342	30.99
FBgn0001128	Drosophila melanogaster	5e-31	127	353	30.03
CM04G01130	Cyanidioschyzon merolae	2e-30	125	361	30.47
AT5G40610	Arabidopsis thaliana	4e-30	125	343	30.32
VC00G135290	Volvox carteri	2e-29	125	374	27.54
phs309770	Phytophtora sojae	2e-29	122	340	29.41
YOL059W	Saccharomyces cerevisiae strain S288C	3e-29	122	346	31.79
gsu64270	Galdieria sulphuraria	1e-26	113	307	28.01
Naga_100042g20	Nannochloropsis gaditana	2e-26	114	350	27.43
CR10G01000	Chlamydomonas reinhardtii	3e-26	116	355	27.32
ENSG00000152642	Homo sapiens	1e-25	110	329	28.27
CNC64A_010G02150	Chlorella sp NC64A	2e-25	114	421	27.55
WBGene00010778	Caenorhabditis elegans	3e-25	110	365	27.67
ccr44700	Chondrus crispus	6e-25	108	318	27.99
Naga_101365g1	Nannochloropsis gaditana	4e-24	102	127	43.31
YDL022W	Saccharomyces cerevisiae strain S288C	1e-23	106	279	30.47
CR01G11400	Chlamydomonas reinhardtii	5e-23	106	366	26.23
CR01G11370	Chlamydomonas reinhardtii	7e-23	105	368	26.09
SPAC23D3.04c	Schizosaccharomyces pombe	7e-23	103	350	28.00
SPBC215.05	Schizosaccharomyces pombe	2e-22	102	368	25.82
PTI_11G02110	Phaeodactylum tricornutum	2e-22	102	295	29.15
FBgn0034825	Drosophila melanogaster	4e-22	100	344	26.74
FC005G09530	Fragilariopsis cylindrus	1e-21	101	288	28.82
FBgn0263048	Drosophila melanogaster	1e-20	99.8	349	27.51
emh525920	Emiliania huxleyi	7e-19	90.9	293	29.01
WBGene00009824	Caenorhabditis elegans	3e-18	90.1	356	24.72
emh721340	Emiliania huxleyi	1e-17	89.0	307	26.71
AA0021G01040	Aureococcus anophagefferens	1e-16	84.3	274	29.20
ES0278G00090	Ectocarpus siliculosus	5e-13	74.7	357	26.89
AA0041G00150	Aureococcus anophagefferens	6e-13	72.0	76	46.05
CV00G07390	Coccomyxa subellipsoidea C-169	1e-12	70.9	171	32.75
gsu63910	Galdieria sulphuraria	1e-12	70.5	158	31.01
emh472240	Emiliania huxleyi	4e-11	68.6	211	29.38
ATR_00053G01340	Amborella trichopoda	2e-09	63.2	248	25.81
OS01G71280	Oryza sativa	1e-08	61.2	306	24.18
emh578870	Emiliania huxleyi	1e-08	58.9	194	25.77
AT2G41540	Arabidopsis thaliana	3e-08	60.1	244	25.82
OS01G58740	Oryza sativa	1e-07	57.8	293	23.55
PP00114G01130	Physcomitrella patens	2e-07	57.4	221	24.89
OS05G41590	Oryza sativa	1e-06	54.7	252	23.02
PP00323G00050	Physcomitrella patens	2e-06	54.3	221	23.98
emh169560	Emiliania huxleyi	6e-06	49.3	95	36.84
AT3G07690	Arabidopsis thaliana	8e-06	52.4	303	22.44

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
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