Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00029G03990	Amborella trichopoda	0.0	1956	938	100.00
ATR_00019G03480	Amborella trichopoda	0.0	1031	967	55.12
OS06G44890	Oryza sativa	0.0	955	980	50.71
AT4G30160	Arabidopsis thaliana	0.0	954	995	51.66
AT2G29890	Arabidopsis thaliana	0.0	940	947	51.43
AT5G57320	Arabidopsis thaliana	0.0	919	978	48.36
OS04G51440	Oryza sativa	0.0	902	953	50.89
OS05G06110	Oryza sativa	0.0	818	842	47.98
ATR_00025G04050	Amborella trichopoda	0.0	732	924	41.13
AT3G57410	Arabidopsis thaliana	0.0	723	967	40.74
AT2G41740	Arabidopsis thaliana	0.0	696	799	43.43
PP00299G00050	Physcomitrella patens	0.0	678	996	38.86
OS08G14230	Oryza sativa	0.0	655	637	54.16
PP00100G00130	Physcomitrella patens	0.0	657	961	38.19
PP00020G00410	Physcomitrella patens	0.0	655	945	39.68
OS03G24220	Oryza sativa	0.0	566	637	43.64
phs187620	Phytophtora sojae	2e-131	425	981	30.07
emh397080	Emiliania huxleyi	3e-110	367	736	32.34
ENSG00000148180	Homo sapiens	1e-104	349	744	31.18
ENSMUSG00000002565	Mus musculus	9e-104	345	734	31.74
ENSMUSG00000026879	Mus musculus	2e-102	344	750	31.07
ENSG00000006747	Homo sapiens	3e-101	338	733	31.38
ENSG00000135407	Homo sapiens	1e-96	329	726	30.99
ENSG00000127831	Homo sapiens	3e-92	317	728	29.53
MRCC299_16G00860	Micromonas sp RCC299	4e-92	319	772	30.31
ES0234G00020	Ectocarpus siliculosus	6e-90	309	771	27.89
ENSMUSG00000025432	Mus musculus	1e-89	309	744	30.51
Naga_100078g6	Nannochloropsis gaditana	3e-87	306	777	30.24
ENSG00000136059	Homo sapiens	3e-79	281	718	29.94
FBgn0010225	Drosophila melanogaster	3e-73	263	755	29.54
DDB_G0276453	Dictyostelium discoideum	5e-67	246	801	26.59
DDB_G0282725	Dictyostelium discoideum	4e-60	228	638	27.59
DDB_G0288557	Dictyostelium discoideum	7e-55	212	576	28.12
CR12G13840	Chlamydomonas reinhardtii	1e-52	201	770	27.01
FBgn0000709	Drosophila melanogaster	2e-51	201	793	24.21
DDB_G0289327	Dictyostelium discoideum	9e-49	182	349	34.96
DDB_G0271058	Dictyostelium discoideum	4e-45	181	643	25.51
VC00G19130	Volvox carteri	5e-42	169	757	23.12
CV00G92530	Coccomyxa subellipsoidea C-169	1e-38	149	236	36.86
WBGene00010593	Caenorhabditis elegans	3e-36	148	422	28.67
FBgn0003187	Drosophila melanogaster	9e-36	150	832	24.40
ENSG00000042493	Homo sapiens	6e-34	139	345	28.99
emh704000	Emiliania huxleyi	6e-33	137	356	28.65
emh154230	Emiliania huxleyi	6e-33	137	356	28.65
PTI_04G04220	Phaeodactylum tricornutum	2e-32	135	371	26.15
TP06G01190	Thalassiosira pseudonana	3e-32	134	347	31.12
emh363800	Emiliania huxleyi	3e-32	134	349	30.09
emh403020	Emiliania huxleyi	4e-31	132	359	28.69
emh184940	Emiliania huxleyi	4e-31	132	359	28.69
PTI_01G05030	Phaeodactylum tricornutum	1e-29	127	348	30.17
WBGene00001443	Caenorhabditis elegans	9e-29	128	727	23.38
FC022G02270	Fragilariopsis cylindrus	2e-27	120	370	27.30
ccr125580	Chondrus crispus	3e-26	116	350	27.43
AA0001G05200	Aureococcus anophagefferens	2e-21	99.4	196	33.16
AA0258G00030	Aureococcus anophagefferens	2e-21	99.4	196	33.16
ENSMUSG00000024236	Mus musculus	1e-19	99.4	739	22.06
ENSG00000197321	Homo sapiens	1e-18	96.3	739	21.65
MP09G04410	Micromonas pusilla strain CCMP1545	2e-16	88.6	321	26.48
DDB_G0291125	Dictyostelium discoideum	1e-14	82.8	657	19.48
PP00105G00200	Physcomitrella patens	7e-14	75.9	63	57.14
DDB_G0291536	Dictyostelium discoideum	5e-12	74.7	719	21.14
emh23860	Emiliania huxleyi	9e-09	59.3	74	35.14
ENSMUSG00000025085	Mus musculus	5e-07	57.8	89	37.08
ENSG00000099204	Homo sapiens	1e-06	56.2	89	35.96

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment