|
CNC64A_288G00010 |
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]Code Context echo "<td><input type='checkbox' name='selected_genes[]' value='".$similarity_hit['gene_id']."' ".$checked." /></td>\n";
echo "<td>".$this->Html->link($similarity_hit_gene,array("controller"=>"genes","action"=>"view",$similarity_hit_gene),array("target"=>"_blank"))."</td>\n";
echo "<td>".$this->Html->link($similarity_hit['common_name'],array("controller"=>"organism","action"=>"view",urlencode($similarity_hit['common_name'])))."</td>\n";
$viewFile = '/xtras/group/biocomp/plaza/versions/plaza_pico_03/app/View/Analysis/custom_tree_creation.ctp'
$dataForView = array(
'allowed_extra_sequences_types' => array(
'aa' => 'Protein',
'dna' => 'DNA'
),
'allowed_editing_methods' => array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
),
'allowed_tree_programs' => array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
),
'allowed_msa_programs' => array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
),
'allowed_number_blasthits' => array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
),
'similarity_hits_genes' => array(
'AT5G63840' => array(
'gene_id' => 'AT5G63840',
'e_value' => '0.0',
'bit_score' => '1909',
'alignment_length' => '922',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00065G01570' => array(
'gene_id' => 'ATR_00065G01570',
'e_value' => '0.0',
'bit_score' => '1308',
'alignment_length' => '909',
'identity_percentage' => '67.88',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'OS03G11720' => array(
'gene_id' => 'OS03G11720',
'e_value' => '0.0',
'bit_score' => '1258',
'alignment_length' => '920',
'identity_percentage' => '66.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00109G00830' => array(
'gene_id' => 'PP00109G00830',
'e_value' => '0.0',
'bit_score' => '1146',
'alignment_length' => '945',
'identity_percentage' => '59.15',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AC00G77390' => array(
'gene_id' => 'AC00G77390',
'e_value' => '0.0',
'bit_score' => '879',
'alignment_length' => '925',
'identity_percentage' => '48.54',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'VC00G110660' => array(
'gene_id' => 'VC00G110660',
'e_value' => '0.0',
'bit_score' => '865',
'alignment_length' => '939',
'identity_percentage' => '48.78',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CV00G24690' => array(
'gene_id' => 'CV00G24690',
'e_value' => '0.0',
'bit_score' => '856',
'alignment_length' => '933',
'identity_percentage' => '48.77',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'PI00G24040' => array(
'gene_id' => 'PI00G24040',
'e_value' => '0.0',
'bit_score' => '852',
'alignment_length' => '938',
'identity_percentage' => '47.33',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0269154' => array(
'gene_id' => 'DDB_G0269154',
'e_value' => '0.0',
'bit_score' => '847',
'alignment_length' => '979',
'identity_percentage' => '45.45',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.04g01620' => array(
'gene_id' => 'RCC4223.04g01620',
'e_value' => '0.0',
'bit_score' => '845',
'alignment_length' => '942',
'identity_percentage' => '46.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_08G05390' => array(
'gene_id' => 'MRCC299_08G05390',
'e_value' => '0.0',
'bit_score' => '833',
'alignment_length' => '949',
'identity_percentage' => '46.58',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'CR03G10710' => array(
'gene_id' => 'CR03G10710',
'e_value' => '0.0',
'bit_score' => '831',
'alignment_length' => '920',
'identity_percentage' => '49.13',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OM_16G01380' => array(
'gene_id' => 'OM_16G01380',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '983',
'identity_percentage' => '44.25',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OT_08G02830' => array(
'gene_id' => 'OT_08G02830',
'e_value' => '0.0',
'bit_score' => '818',
'alignment_length' => '957',
'identity_percentage' => '44.62',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OL08G02650' => array(
'gene_id' => 'OL08G02650',
'e_value' => '0.0',
'bit_score' => '806',
'alignment_length' => '845',
'identity_percentage' => '48.52',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000071650' => array(
'gene_id' => 'ENSMUSG00000071650',
'e_value' => '0.0',
'bit_score' => '798',
'alignment_length' => '976',
'identity_percentage' => '43.24',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100017g38' => array(
'gene_id' => 'Naga_100017g38',
'e_value' => '0.0',
'bit_score' => '797',
'alignment_length' => '738',
'identity_percentage' => '52.03',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'MP05G06760' => array(
'gene_id' => 'MP05G06760',
'e_value' => '0.0',
'bit_score' => '796',
'alignment_length' => '1019',
'identity_percentage' => '43.47',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'FC002G01800' => array(
'gene_id' => 'FC002G01800',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '801',
'identity_percentage' => '48.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000062646' => array(
'gene_id' => 'ENSMUSG00000062646',
'e_value' => '0.0',
'bit_score' => '771',
'alignment_length' => '935',
'identity_percentage' => '42.14',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000214013' => array(
'gene_id' => 'ENSG00000214013',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '937',
'identity_percentage' => '42.90',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_01G07160' => array(
'gene_id' => 'BPRRCC1105_01G07160',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '941',
'identity_percentage' => '45.16',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'ccr158380' => array(
'gene_id' => 'ccr158380',
'e_value' => '0.0',
'bit_score' => '751',
'alignment_length' => '763',
'identity_percentage' => '49.41',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00009583' => array(
'gene_id' => 'WBGene00009583',
'e_value' => '0.0',
'bit_score' => '736',
'alignment_length' => '945',
'identity_percentage' => '41.16',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'PTI_05G01610' => array(
'gene_id' => 'PTI_05G01610',
'e_value' => '0.0',
'bit_score' => '741',
'alignment_length' => '786',
'identity_percentage' => '47.07',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'TP07G02080' => array(
'gene_id' => 'TP07G02080',
'e_value' => '0.0',
'bit_score' => '733',
'alignment_length' => '748',
'identity_percentage' => '49.33',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0027588' => array(
'gene_id' => 'FBgn0027588',
'e_value' => '0.0',
'bit_score' => '725',
'alignment_length' => '971',
'identity_percentage' => '39.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'emh160400' => array(
'gene_id' => 'emh160400',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh626580' => array(
'gene_id' => 'emh626580',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00018682' => array(
'gene_id' => 'WBGene00018682',
'e_value' => '0.0',
'bit_score' => '722',
'alignment_length' => '880',
'identity_percentage' => '42.84',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'phs303660' => array(
'gene_id' => 'phs303660',
'e_value' => '0.0',
'bit_score' => '724',
'alignment_length' => '990',
'identity_percentage' => '42.42',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G07800' => array(
'gene_id' => 'HE0000G07800',
'e_value' => '0.0',
'bit_score' => '685',
'alignment_length' => '791',
'identity_percentage' => '46.65',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'AA0001G01930' => array(
'gene_id' => 'AA0001G01930',
'e_value' => '0.0',
'bit_score' => '701',
'alignment_length' => '668',
'identity_percentage' => '51.65',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'AP00G19080' => array(
'gene_id' => 'AP00G19080',
'e_value' => '0.0',
'bit_score' => '669',
'alignment_length' => '660',
'identity_percentage' => '51.82',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'SPAC1002.03c' => array(
'gene_id' => 'SPAC1002.03c',
'e_value' => '0.0',
'bit_score' => '650',
'alignment_length' => '880',
'identity_percentage' => '39.66',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'gsu126010' => array(
'gene_id' => 'gsu126010',
'e_value' => '0.0',
'bit_score' => '637',
'alignment_length' => '922',
'identity_percentage' => '38.07',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CM13G00820' => array(
'gene_id' => 'CM13G00820',
'e_value' => '0.0',
'bit_score' => '600',
'alignment_length' => '987',
'identity_percentage' => '37.18',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'YBR229C' => array(
'gene_id' => 'YBR229C',
'e_value' => '0.0',
'bit_score' => '560',
'alignment_length' => '980',
'identity_percentage' => '34.08',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
[maximum depth reached]
)
),
'ES0080G00420' => array(
'gene_id' => 'ES0080G00420',
'e_value' => '9e-177',
'bit_score' => '530',
'alignment_length' => '572',
'identity_percentage' => '46.68',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_08G02600' => array(
'gene_id' => 'ORCC809_08G02600',
'e_value' => '4e-152',
'bit_score' => '484',
'alignment_length' => '406',
'identity_percentage' => '57.39',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'emh472720' => array(
'gene_id' => 'emh472720',
'e_value' => '1e-131',
'bit_score' => '427',
'alignment_length' => '642',
'identity_percentage' => '38.63',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'PP00242G00250' => array(
'gene_id' => 'PP00242G00250',
'e_value' => '5e-107',
'bit_score' => '361',
'alignment_length' => '496',
'identity_percentage' => '39.72',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00005G01250' => array(
'gene_id' => 'PP00005G01250',
'e_value' => '2e-102',
'bit_score' => '350',
'alignment_length' => '581',
'identity_percentage' => '36.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00041G01080' => array(
'gene_id' => 'PP00041G01080',
'e_value' => '5e-102',
'bit_score' => '349',
'alignment_length' => '496',
'identity_percentage' => '38.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00140G00390' => array(
'gene_id' => 'PP00140G00390',
'e_value' => '1e-101',
'bit_score' => '346',
'alignment_length' => '496',
'identity_percentage' => '37.90',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT3G23640' => array(
'gene_id' => 'AT3G23640',
'e_value' => '1e-97',
'bit_score' => '335',
'alignment_length' => '586',
'identity_percentage' => '34.98',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'OS06G46340' => array(
'gene_id' => 'OS06G46340',
'e_value' => '3e-95',
'bit_score' => '326',
'alignment_length' => '608',
'identity_percentage' => '35.20',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0269790' => array(
'gene_id' => 'DDB_G0269790',
'e_value' => '1e-94',
'bit_score' => '324',
'alignment_length' => '772',
'identity_percentage' => '29.79',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'PP00060G00720' => array(
'gene_id' => 'PP00060G00720',
'e_value' => '2e-94',
'bit_score' => '326',
'alignment_length' => '522',
'identity_percentage' => '36.02',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS07G23944' => array(
'gene_id' => 'OS07G23944',
'e_value' => '5e-93',
'bit_score' => '322',
'alignment_length' => '615',
'identity_percentage' => '33.82',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00048G01310' => array(
'gene_id' => 'ATR_00048G01310',
'e_value' => '6e-93',
'bit_score' => '323',
'alignment_length' => '495',
'identity_percentage' => '36.36',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'PP00157G00350' => array(
'gene_id' => 'PP00157G00350',
'e_value' => '2e-92',
'bit_score' => '319',
'alignment_length' => '726',
'identity_percentage' => '31.82',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS07G23880' => array(
'gene_id' => 'OS07G23880',
'e_value' => '3e-92',
'bit_score' => '321',
'alignment_length' => '572',
'identity_percentage' => '35.14',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'AT5G11720' => array(
'gene_id' => 'AT5G11720',
'e_value' => '1e-90',
'bit_score' => '314',
'alignment_length' => '859',
'identity_percentage' => '29.57',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'OS06G46284' => array(
'gene_id' => 'OS06G46284',
'e_value' => '1e-90',
'bit_score' => '313',
'alignment_length' => '607',
'identity_percentage' => '34.27',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'phs293220' => array(
'gene_id' => 'phs293220',
'e_value' => '8e-90',
'bit_score' => '311',
'alignment_length' => '667',
'identity_percentage' => '31.33',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00092G00960' => array(
'gene_id' => 'ATR_00092G00960',
'e_value' => '2e-89',
'bit_score' => '310',
'alignment_length' => '657',
'identity_percentage' => '31.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'phs293240' => array(
'gene_id' => 'phs293240',
'e_value' => '2e-89',
'bit_score' => '314',
'alignment_length' => '682',
'identity_percentage' => '31.09',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00079G00110' => array(
'gene_id' => 'ATR_00079G00110',
'e_value' => '2e-89',
'bit_score' => '307',
'alignment_length' => '705',
'identity_percentage' => '31.91',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'PP00264G00160' => array(
'gene_id' => 'PP00264G00160',
'e_value' => '9e-87',
'bit_score' => '303',
'alignment_length' => '736',
'identity_percentage' => '30.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00011G01860' => array(
'gene_id' => 'PP00011G01860',
'e_value' => '1e-86',
'bit_score' => '303',
'alignment_length' => '760',
'identity_percentage' => '30.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT3G45940' => array(
'gene_id' => 'AT3G45940',
'e_value' => '1e-86',
'bit_score' => '302',
'alignment_length' => '862',
'identity_percentage' => '28.89',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'PP00013G02430' => array(
'gene_id' => 'PP00013G02430',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '716',
'identity_percentage' => '30.31',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00264G00120' => array(
'gene_id' => 'PP00264G00120',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '746',
'identity_percentage' => '29.62',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00080G01120' => array(
'gene_id' => 'PP00080G01120',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '765',
'identity_percentage' => '30.07',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00025G00520' => array(
'gene_id' => 'PP00025G00520',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '740',
'identity_percentage' => '29.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS01G03950' => array(
'gene_id' => 'OS01G03950',
'e_value' => '1e-83',
'bit_score' => '295',
'alignment_length' => '706',
'identity_percentage' => '30.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00086G00660' => array(
'gene_id' => 'PP00086G00660',
'e_value' => '1e-83',
'bit_score' => '293',
'alignment_length' => '706',
'identity_percentage' => '30.03',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00119G00640' => array(
'gene_id' => 'PP00119G00640',
'e_value' => '2e-82',
'bit_score' => '291',
'alignment_length' => '729',
'identity_percentage' => '29.36',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT1G68560' => array(
'gene_id' => 'AT1G68560',
'e_value' => '2e-81',
'bit_score' => '288',
'alignment_length' => '903',
'identity_percentage' => '27.13',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'PP00006G00120' => array(
'gene_id' => 'PP00006G00120',
'e_value' => '2e-80',
'bit_score' => '285',
'alignment_length' => '723',
'identity_percentage' => '28.49',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_025G00750' => array(
'gene_id' => 'CNC64A_025G00750',
'e_value' => '2e-80',
'bit_score' => '276',
'alignment_length' => '384',
'identity_percentage' => '44.53',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'PP00245G00510' => array(
'gene_id' => 'PP00245G00510',
'e_value' => '4e-79',
'bit_score' => '281',
'alignment_length' => '747',
'identity_percentage' => '28.78',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00043G00100' => array(
'gene_id' => 'PP00043G00100',
'e_value' => '5e-78',
'bit_score' => '278',
'alignment_length' => '655',
'identity_percentage' => '30.69',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AC00G97780' => array(
'gene_id' => 'AC00G97780',
'e_value' => '9e-78',
'bit_score' => '277',
'alignment_length' => '586',
'identity_percentage' => '33.28',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'AP00G35250' => array(
'gene_id' => 'AP00G35250',
'e_value' => '1e-77',
'bit_score' => '279',
'alignment_length' => '519',
'identity_percentage' => '34.87',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000068587' => array(
'gene_id' => 'ENSMUSG00000068587',
'e_value' => '2e-77',
'bit_score' => '282',
'alignment_length' => '935',
'identity_percentage' => '28.02',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00079G00080' => array(
'gene_id' => 'ATR_00079G00080',
'e_value' => '1e-76',
'bit_score' => '269',
'alignment_length' => '565',
'identity_percentage' => '32.57',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'AC00G02390' => array(
'gene_id' => 'AC00G02390',
'e_value' => '2e-75',
'bit_score' => '265',
'alignment_length' => '555',
'identity_percentage' => '31.17',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000027790' => array(
'gene_id' => 'ENSMUSG00000027790',
'e_value' => '8e-75',
'bit_score' => '274',
'alignment_length' => '650',
'identity_percentage' => '31.38',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000257335' => array(
'gene_id' => 'ENSG00000257335',
'e_value' => '4e-74',
'bit_score' => '273',
'alignment_length' => '846',
'identity_percentage' => '28.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000090402' => array(
'gene_id' => 'ENSG00000090402',
'e_value' => '4e-70',
'bit_score' => '260',
'alignment_length' => '836',
'identity_percentage' => '29.19',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000278563' => array(
'gene_id' => 'ENSG00000278563',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000257743' => array(
'gene_id' => 'ENSG00000257743',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'pte388210' => array(
'gene_id' => 'pte388210',
'e_value' => '3e-67',
'bit_score' => '245',
'alignment_length' => '645',
'identity_percentage' => '27.60',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte323710' => array(
'gene_id' => 'pte323710',
'e_value' => '3e-66',
'bit_score' => '243',
'alignment_length' => '655',
'identity_percentage' => '26.72',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte374950' => array(
'gene_id' => 'pte374950',
'e_value' => '2e-65',
'bit_score' => '240',
'alignment_length' => '648',
'identity_percentage' => '27.47',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_008G02740' => array(
'gene_id' => 'CNC64A_008G02740',
'e_value' => '2e-65',
'bit_score' => '244',
'alignment_length' => '634',
'identity_percentage' => '30.91',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'CV00G66180' => array(
'gene_id' => 'CV00G66180',
'e_value' => '5e-64',
'bit_score' => '237',
'alignment_length' => '743',
'identity_percentage' => '25.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CV00G87890' => array(
'gene_id' => 'CV00G87890',
'e_value' => '3e-62',
'bit_score' => '231',
'alignment_length' => '629',
'identity_percentage' => '26.55',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00017071' => array(
'gene_id' => 'WBGene00017071',
'e_value' => '5e-62',
'bit_score' => '231',
'alignment_length' => '684',
'identity_percentage' => '28.22',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'pte268290' => array(
'gene_id' => 'pte268290',
'e_value' => '2e-60',
'bit_score' => '225',
'alignment_length' => '593',
'identity_percentage' => '28.16',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte186640' => array(
'gene_id' => 'pte186640',
'e_value' => '1e-57',
'bit_score' => '217',
'alignment_length' => '598',
'identity_percentage' => '27.26',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.199g00040' => array(
'gene_id' => 'RCC4223.199g00040',
'e_value' => '3e-56',
'bit_score' => '212',
'alignment_length' => '497',
'identity_percentage' => '30.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'CV00G66200' => array(
'gene_id' => 'CV00G66200',
'e_value' => '6e-56',
'bit_score' => '209',
'alignment_length' => '659',
'identity_percentage' => '27.01',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'pte70280' => array(
'gene_id' => 'pte70280',
'e_value' => '3e-50',
'bit_score' => '194',
'alignment_length' => '678',
'identity_percentage' => '26.55',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_019G00790' => array(
'gene_id' => 'CNC64A_019G00790',
'e_value' => '2e-49',
'bit_score' => '183',
'alignment_length' => '345',
'identity_percentage' => '33.33',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'SPAC1039.11c' => array(
'gene_id' => 'SPAC1039.11c',
'e_value' => '3e-49',
'bit_score' => '193',
'alignment_length' => '298',
'identity_percentage' => '37.58',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'SPAC30D11.01c' => array(
'gene_id' => 'SPAC30D11.01c',
'e_value' => '9e-48',
'bit_score' => '188',
'alignment_length' => '352',
'identity_percentage' => '33.81',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'PP00281G00070' => array(
'gene_id' => 'PP00281G00070',
'e_value' => '3e-47',
'bit_score' => '181',
'alignment_length' => '501',
'identity_percentage' => '28.54',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'SPAPB24D3.10c' => array(
'gene_id' => 'SPAPB24D3.10c',
'e_value' => '3e-47',
'bit_score' => '187',
'alignment_length' => '360',
'identity_percentage' => '33.06',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'pte180100' => array(
'gene_id' => 'pte180100',
'e_value' => '6e-47',
'bit_score' => '185',
'alignment_length' => '734',
'identity_percentage' => '26.57',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00019895' => array(
'gene_id' => 'WBGene00019895',
'e_value' => '2e-45',
'bit_score' => '181',
'alignment_length' => '683',
'identity_percentage' => '25.92',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'phs92320' => array(
'gene_id' => 'phs92320',
'e_value' => '8e-45',
'bit_score' => '179',
'alignment_length' => '332',
'identity_percentage' => '34.34',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'gsu139510' => array(
'gene_id' => 'gsu139510',
'e_value' => '2e-42',
'bit_score' => '171',
'alignment_length' => '475',
'identity_percentage' => '27.16',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CV00G74030' => array(
'gene_id' => 'CV00G74030',
'e_value' => '2e-41',
'bit_score' => '169',
'alignment_length' => '291',
'identity_percentage' => '34.71',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G25410' => array(
'gene_id' => 'HE0000G25410',
'e_value' => '9e-41',
'bit_score' => '164',
'alignment_length' => '451',
'identity_percentage' => '27.94',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'CV00G33310' => array(
'gene_id' => 'CV00G33310',
'e_value' => '3e-39',
'bit_score' => '162',
'alignment_length' => '359',
'identity_percentage' => '30.92',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'emh746930' => array(
'gene_id' => 'emh746930',
'e_value' => '2e-38',
'bit_score' => '159',
'alignment_length' => '352',
'identity_percentage' => '32.39',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh564800' => array(
'gene_id' => 'emh564800',
'e_value' => '3e-37',
'bit_score' => '155',
'alignment_length' => '352',
'identity_percentage' => '32.10',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh552990' => array(
'gene_id' => 'emh552990',
'e_value' => '4e-37',
'bit_score' => '154',
'alignment_length' => '511',
'identity_percentage' => '27.79',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'phs71110' => array(
'gene_id' => 'phs71110',
'e_value' => '6e-33',
'bit_score' => '141',
'alignment_length' => '398',
'identity_percentage' => '29.90',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'CR03G11570' => array(
'gene_id' => 'CR03G11570',
'e_value' => '1e-32',
'bit_score' => '141',
'alignment_length' => '263',
'identity_percentage' => '33.46',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'CM06G01210' => array(
'gene_id' => 'CM06G01210',
'e_value' => '1e-27',
'bit_score' => '125',
'alignment_length' => '470',
'identity_percentage' => '26.38',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'gsu63580' => array(
'gene_id' => 'gsu63580',
'e_value' => '4e-27',
'bit_score' => '122',
'alignment_length' => '561',
'identity_percentage' => '22.82',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100114g11' => array(
'gene_id' => 'Naga_100114g11',
'e_value' => '2e-24',
'bit_score' => '114',
'alignment_length' => '434',
'identity_percentage' => '25.81',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_288G00010' => array(
'gene_id' => 'CNC64A_288G00010',
'e_value' => '7e-24',
'bit_score' => '106',
'alignment_length' => '193',
'identity_percentage' => '36.27',
'gf' => array(
[maximum depth reached]
)
),
'phs71090' => array(
'gene_id' => 'phs71090',
'e_value' => '4e-23',
'bit_score' => '107',
'alignment_length' => '260',
'identity_percentage' => '26.92',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'MP05G04870' => array(
'gene_id' => 'MP05G04870',
'e_value' => '2e-22',
'bit_score' => '107',
'alignment_length' => '398',
'identity_percentage' => '25.63',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'OT_04G02420' => array(
'gene_id' => 'OT_04G02420',
'e_value' => '1e-21',
'bit_score' => '104',
'alignment_length' => '372',
'identity_percentage' => '26.61',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'MP08G03280' => array(
'gene_id' => 'MP08G03280',
'e_value' => '7e-21',
'bit_score' => '102',
'alignment_length' => '440',
'identity_percentage' => '25.91',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_04G02780' => array(
'gene_id' => 'ORCC809_04G02780',
'e_value' => '9e-21',
'bit_score' => '100',
'alignment_length' => '408',
'identity_percentage' => '25.25',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'OT_08G03880' => array(
'gene_id' => 'OT_08G03880',
'e_value' => '2e-20',
'bit_score' => '101',
'alignment_length' => '357',
'identity_percentage' => '24.65',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OM_16G02430' => array(
'gene_id' => 'OM_16G02430',
'e_value' => '3e-20',
'bit_score' => '100',
'alignment_length' => '362',
'identity_percentage' => '25.97',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OL04G02410' => array(
'gene_id' => 'OL04G02410',
'e_value' => '6e-20',
'bit_score' => '97.4',
'alignment_length' => '405',
'identity_percentage' => '24.69',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_11G02870' => array(
'gene_id' => 'MRCC299_11G02870',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '413',
'identity_percentage' => '27.60',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'emh123040' => array(
'gene_id' => 'emh123040',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '216',
'identity_percentage' => '31.94',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh362880' => array(
'gene_id' => 'emh362880',
'e_value' => '2e-19',
'bit_score' => '98.2',
'alignment_length' => '190',
'identity_percentage' => '33.16',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'gsu137050' => array(
'gene_id' => 'gsu137050',
'e_value' => '2e-19',
'bit_score' => '97.8',
'alignment_length' => '390',
'identity_percentage' => '24.62',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'gsu133460' => array(
'gene_id' => 'gsu133460',
'e_value' => '2e-18',
'bit_score' => '91.7',
'alignment_length' => '255',
'identity_percentage' => '27.84',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'PP00041G01100' => array(
'gene_id' => 'PP00041G01100',
'e_value' => '6e-18',
'bit_score' => '93.6',
'alignment_length' => '499',
'identity_percentage' => '24.05',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_06G04670' => array(
'gene_id' => 'BPRRCC1105_06G04670',
'e_value' => '7e-18',
'bit_score' => '93.2',
'alignment_length' => '398',
'identity_percentage' => '24.87',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_08G03350' => array(
'gene_id' => 'MRCC299_08G03350',
'e_value' => '1e-17',
'bit_score' => '92.0',
'alignment_length' => '403',
'identity_percentage' => '25.56',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_12G00530' => array(
'gene_id' => 'ORCC809_12G00530',
'e_value' => '1e-17',
'bit_score' => '92.4',
'alignment_length' => '368',
'identity_percentage' => '26.36',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_034G00570' => array(
'gene_id' => 'CNC64A_034G00570',
'e_value' => '1e-17',
'bit_score' => '84.7',
'alignment_length' => '79',
'identity_percentage' => '49.37',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'OL08G03830' => array(
'gene_id' => 'OL08G03830',
'e_value' => '2e-17',
'bit_score' => '90.9',
'alignment_length' => '572',
'identity_percentage' => '22.73',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0261575' => array(
'gene_id' => 'FBgn0261575',
'e_value' => '5e-17',
'bit_score' => '90.1',
'alignment_length' => '379',
'identity_percentage' => '24.80',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_05G02990' => array(
'gene_id' => 'ORCC809_05G02990',
'e_value' => '5e-17',
'bit_score' => '90.5',
'alignment_length' => '213',
'identity_percentage' => '31.92',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'OL05G03060' => array(
'gene_id' => 'OL05G03060',
'e_value' => '6e-17',
'bit_score' => '89.4',
'alignment_length' => '387',
'identity_percentage' => '28.68',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'CV00G34570' => array(
'gene_id' => 'CV00G34570',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'OM_02G02640' => array(
'gene_id' => 'OM_02G02640',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '368',
'identity_percentage' => '25.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000046312' => array(
'gene_id' => 'ENSMUSG00000046312',
'e_value' => '8e-17',
'bit_score' => '89.4',
'alignment_length' => '398',
'identity_percentage' => '24.12',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.09g03870' => array(
'gene_id' => 'RCC4223.09g03870',
'e_value' => '4e-16',
'bit_score' => '87.4',
'alignment_length' => '198',
'identity_percentage' => '33.33',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000164976' => array(
'gene_id' => 'ENSG00000164976',
'e_value' => '5e-16',
'bit_score' => '87.0',
'alignment_length' => '395',
'identity_percentage' => '23.80',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'OM_03G03260' => array(
'gene_id' => 'OM_03G03260',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '207',
'identity_percentage' => '31.40',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_01G05990' => array(
'gene_id' => 'BPRRCC1105_01G05990',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '353',
'identity_percentage' => '23.51',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'PI00G61580' => array(
'gene_id' => 'PI00G61580',
'e_value' => '3e-15',
'bit_score' => '84.7',
'alignment_length' => '198',
'identity_percentage' => '32.83',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00095G00110' => array(
'gene_id' => 'ATR_00095G00110',
'e_value' => '5e-14',
'bit_score' => '80.5',
'alignment_length' => '461',
'identity_percentage' => '22.34',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_034G00560' => array(
'gene_id' => 'CNC64A_034G00560',
'e_value' => '5e-13',
'bit_score' => '76.6',
'alignment_length' => '343',
'identity_percentage' => '23.03',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'PP00065G00350' => array(
'gene_id' => 'PP00065G00350',
'e_value' => '1e-12',
'bit_score' => '75.1',
'alignment_length' => '311',
'identity_percentage' => '21.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'FC006G00220' => array(
'gene_id' => 'FC006G00220',
'e_value' => '1e-12',
'bit_score' => '76.3',
'alignment_length' => '314',
'identity_percentage' => '25.16',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_529G00010' => array(
'gene_id' => 'CNC64A_529G00010',
'e_value' => '2e-12',
'bit_score' => '70.5',
'alignment_length' => '89',
'identity_percentage' => '41.57',
'gf' => array(
[maximum depth reached]
)
),
'OT_05G03110' => array(
'gene_id' => 'OT_05G03110',
'e_value' => '2e-11',
'bit_score' => '72.0',
'alignment_length' => '216',
'identity_percentage' => '29.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'CM13G02020' => array(
'gene_id' => 'CM13G02020',
'e_value' => '8e-10',
'bit_score' => '67.0',
'alignment_length' => '218',
'identity_percentage' => '26.61',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0053080' => array(
'gene_id' => 'FBgn0053080',
'e_value' => '1e-09',
'bit_score' => '66.6',
'alignment_length' => '400',
'identity_percentage' => '22.50',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'emh755690' => array(
'gene_id' => 'emh755690',
'e_value' => '2e-09',
'bit_score' => '65.5',
'alignment_length' => '232',
'identity_percentage' => '26.29',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'MP02G01920' => array(
'gene_id' => 'MP02G01920',
'e_value' => '3e-09',
'bit_score' => '65.1',
'alignment_length' => '223',
'identity_percentage' => '26.46',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'pte584840' => array(
'gene_id' => 'pte584840',
'e_value' => '2e-08',
'bit_score' => '62.4',
'alignment_length' => '495',
'identity_percentage' => '18.59',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'emh344740' => array(
'gene_id' => 'emh344740',
'e_value' => '4e-08',
'bit_score' => '61.2',
'alignment_length' => '304',
'identity_percentage' => '23.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ccr117820' => array(
'gene_id' => 'ccr117820',
'e_value' => '1e-07',
'bit_score' => '59.7',
'alignment_length' => '423',
'identity_percentage' => '23.64',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'AA0007G01760' => array(
'gene_id' => 'AA0007G01760',
'e_value' => '4e-07',
'bit_score' => '58.2',
'alignment_length' => '411',
'identity_percentage' => '23.36',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
)
),
'similarity_hits_species' => array(
'ath' => array(
(int) 0 => 'AT5G63840',
(int) 1 => 'AT3G23640',
(int) 2 => 'AT5G11720',
(int) 3 => 'AT3G45940',
(int) 4 => 'AT1G68560'
),
'atr' => array(
(int) 0 => 'ATR_00065G01570',
(int) 1 => 'ATR_00048G01310',
(int) 2 => 'ATR_00092G00960',
(int) 3 => 'ATR_00079G00110',
(int) 4 => 'ATR_00079G00080',
(int) 5 => 'ATR_00095G00110'
),
'osa' => array(
(int) 0 => 'OS03G11720',
(int) 1 => 'OS06G46340',
(int) 2 => 'OS07G23944',
(int) 3 => 'OS07G23880',
(int) 4 => 'OS06G46284',
(int) 5 => 'OS01G03950'
),
'ppa' => array(
(int) 0 => 'PP00109G00830',
(int) 1 => 'PP00242G00250',
(int) 2 => 'PP00005G01250',
(int) 3 => 'PP00041G01080',
(int) 4 => 'PP00140G00390',
(int) 5 => 'PP00060G00720',
(int) 6 => 'PP00157G00350',
(int) 7 => 'PP00264G00160',
(int) 8 => 'PP00011G01860',
(int) 9 => 'PP00013G02430',
(int) 10 => 'PP00264G00120',
(int) 11 => 'PP00080G01120',
(int) 12 => 'PP00025G00520',
(int) 13 => 'PP00086G00660',
(int) 14 => 'PP00119G00640',
(int) 15 => 'PP00006G00120',
(int) 16 => 'PP00245G00510',
(int) 17 => 'PP00043G00100',
(int) 18 => 'PP00281G00070',
(int) 19 => 'PP00041G01100',
(int) 20 => 'PP00065G00350'
),
'acg' => array(
(int) 0 => 'AC00G77390',
(int) 1 => 'AC00G97780',
(int) 2 => 'AC00G02390'
),
'vca' => array(
(int) 0 => 'VC00G110660'
),
'cvu' => array(
(int) 0 => 'CV00G24690',
(int) 1 => 'CV00G66180',
(int) 2 => 'CV00G87890',
(int) 3 => 'CV00G66200',
(int) 4 => 'CV00G74030',
(int) 5 => 'CV00G33310',
(int) 6 => 'CV00G34570'
),
'pse3' => array(
(int) 0 => 'PI00G24040',
(int) 1 => 'PI00G61580'
),
'ddi' => array(
(int) 0 => 'DDB_G0269154',
(int) 1 => 'DDB_G0269790'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g01620',
(int) 1 => 'RCC4223.199g00040',
(int) 2 => 'RCC4223.09g03870'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_08G05390',
(int) 1 => 'MRCC299_11G02870',
(int) 2 => 'MRCC299_08G03350'
),
'cre' => array(
(int) 0 => 'CR03G10710',
(int) 1 => 'CR03G11570'
),
'ome' => array(
(int) 0 => 'OM_16G01380',
(int) 1 => 'OM_16G02430',
(int) 2 => 'OM_02G02640',
(int) 3 => 'OM_03G03260'
),
'ota' => array(
(int) 0 => 'OT_08G02830',
(int) 1 => 'OT_04G02420',
(int) 2 => 'OT_08G03880',
(int) 3 => 'OT_05G03110'
),
'olu' => array(
(int) 0 => 'OL08G02650',
(int) 1 => 'OL04G02410',
(int) 2 => 'OL08G03830',
(int) 3 => 'OL05G03060'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000071650',
(int) 1 => 'ENSMUSG00000062646',
(int) 2 => 'ENSMUSG00000068587',
(int) 3 => 'ENSMUSG00000027790',
(int) 4 => 'ENSMUSG00000046312'
),
'nga' => array(
(int) 0 => 'Naga_100017g38',
(int) 1 => 'Naga_100114g11'
),
'mpu' => array(
(int) 0 => 'MP05G06760',
(int) 1 => 'MP05G04870',
(int) 2 => 'MP08G03280',
(int) 3 => 'MP02G01920'
),
'fcy' => array(
(int) 0 => 'FC002G01800',
(int) 1 => 'FC006G00220'
),
'hom' => array(
(int) 0 => 'ENSG00000214013',
(int) 1 => 'ENSG00000257335',
(int) 2 => 'ENSG00000090402',
(int) 3 => 'ENSG00000278563',
(int) 4 => 'ENSG00000257743',
(int) 5 => 'ENSG00000164976'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_01G07160',
(int) 1 => 'BPRRCC1105_06G04670',
(int) 2 => 'BPRRCC1105_01G05990'
),
'ccr' => array(
(int) 0 => 'ccr158380',
(int) 1 => 'ccr117820'
),
'cel' => array(
(int) 0 => 'WBGene00009583',
(int) 1 => 'WBGene00018682',
(int) 2 => 'WBGene00017071',
(int) 3 => 'WBGene00019895'
),
'ptri' => array(
(int) 0 => 'PTI_05G01610'
),
'tps' => array(
(int) 0 => 'TP07G02080'
),
'drm' => array(
(int) 0 => 'FBgn0027588',
(int) 1 => 'FBgn0261575',
(int) 2 => 'FBgn0053080'
),
'emh' => array(
(int) 0 => 'emh160400',
(int) 1 => 'emh626580',
(int) 2 => 'emh472720',
(int) 3 => 'emh746930',
(int) 4 => 'emh564800',
(int) 5 => 'emh552990',
(int) 6 => 'emh123040',
(int) 7 => 'emh362880',
(int) 8 => 'emh755690',
(int) 9 => 'emh344740'
),
'phs' => array(
(int) 0 => 'phs303660',
(int) 1 => 'phs293220',
(int) 2 => 'phs293240',
(int) 3 => 'phs92320',
(int) 4 => 'phs71110',
(int) 5 => 'phs71090'
),
'hsp' => array(
(int) 0 => 'HE0000G07800',
(int) 1 => 'HE0000G25410'
),
'aan' => array(
(int) 0 => 'AA0001G01930',
(int) 1 => 'AA0007G01760'
),
'apr' => array(
(int) 0 => 'AP00G19080',
(int) 1 => 'AP00G35250'
),
'scp' => array(
(int) 0 => 'SPAC1002.03c',
(int) 1 => 'SPAC1039.11c',
(int) 2 => 'SPAC30D11.01c',
(int) 3 => 'SPAPB24D3.10c'
),
'gsu' => array(
(int) 0 => 'gsu126010',
(int) 1 => 'gsu139510',
(int) 2 => 'gsu63580',
(int) 3 => 'gsu137050',
(int) 4 => 'gsu133460'
),
'cme' => array(
(int) 0 => 'CM13G00820',
(int) 1 => 'CM06G01210',
(int) 2 => 'CM13G02020'
),
'sac' => array(
(int) 0 => 'YBR229C'
),
'esi' => array(
(int) 0 => 'ES0080G00420'
),
'orcc809' => array(
(int) 0 => 'ORCC809_08G02600',
(int) 1 => 'ORCC809_04G02780',
(int) 2 => 'ORCC809_12G00530',
(int) 3 => 'ORCC809_05G02990'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_025G00750',
(int) 1 => 'CNC64A_008G02740',
(int) 2 => 'CNC64A_019G00790',
(int) 3 => 'CNC64A_034G00570',
(int) 4 => 'CNC64A_034G00560'
),
'pte' => array(
(int) 0 => 'pte388210',
(int) 1 => 'pte323710',
(int) 2 => 'pte374950',
(int) 3 => 'pte268290',
(int) 4 => 'pte186640',
(int) 5 => 'pte70280',
(int) 6 => 'pte180100',
(int) 7 => 'pte584840'
)
),
'gene_id' => 'AT5G63840',
'all_species_index' => array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'all_species' => array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'gene_family_types_information' => array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
),
'gene_family_types_configuration' => array(),
'data_identifier' => 'AT5G63840',
'data_type' => 'gene_id',
'allow_async_use' => true,
'gene_placeholder' => 'ES0116G00040',
'gf_placeholder' => 'HOM03P017607',
'title_for_layout' => 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
)
$allowed_extra_sequences_types = array(
'aa' => 'Protein',
'dna' => 'DNA'
)
$allowed_editing_methods = array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
)
$allowed_tree_programs = array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
)
$similarity_hits_genes = array(
'AT5G63840' => array(
'gene_id' => 'AT5G63840',
'e_value' => '0.0',
'bit_score' => '1909',
'alignment_length' => '922',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ATR_00065G01570' => array(
'gene_id' => 'ATR_00065G01570',
'e_value' => '0.0',
'bit_score' => '1308',
'alignment_length' => '909',
'identity_percentage' => '67.88',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OS03G11720' => array(
'gene_id' => 'OS03G11720',
'e_value' => '0.0',
'bit_score' => '1258',
'alignment_length' => '920',
'identity_percentage' => '66.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PP00109G00830' => array(
'gene_id' => 'PP00109G00830',
'e_value' => '0.0',
'bit_score' => '1146',
'alignment_length' => '945',
'identity_percentage' => '59.15',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AC00G77390' => array(
'gene_id' => 'AC00G77390',
'e_value' => '0.0',
'bit_score' => '879',
'alignment_length' => '925',
'identity_percentage' => '48.54',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'VC00G110660' => array(
'gene_id' => 'VC00G110660',
'e_value' => '0.0',
'bit_score' => '865',
'alignment_length' => '939',
'identity_percentage' => '48.78',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CV00G24690' => array(
'gene_id' => 'CV00G24690',
'e_value' => '0.0',
'bit_score' => '856',
'alignment_length' => '933',
'identity_percentage' => '48.77',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PI00G24040' => array(
'gene_id' => 'PI00G24040',
'e_value' => '0.0',
'bit_score' => '852',
'alignment_length' => '938',
'identity_percentage' => '47.33',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'DDB_G0269154' => array(
'gene_id' => 'DDB_G0269154',
'e_value' => '0.0',
'bit_score' => '847',
'alignment_length' => '979',
'identity_percentage' => '45.45',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'RCC4223.04g01620' => array(
'gene_id' => 'RCC4223.04g01620',
'e_value' => '0.0',
'bit_score' => '845',
'alignment_length' => '942',
'identity_percentage' => '46.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'MRCC299_08G05390' => array(
'gene_id' => 'MRCC299_08G05390',
'e_value' => '0.0',
'bit_score' => '833',
'alignment_length' => '949',
'identity_percentage' => '46.58',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CR03G10710' => array(
'gene_id' => 'CR03G10710',
'e_value' => '0.0',
'bit_score' => '831',
'alignment_length' => '920',
'identity_percentage' => '49.13',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OM_16G01380' => array(
'gene_id' => 'OM_16G01380',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '983',
'identity_percentage' => '44.25',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OT_08G02830' => array(
'gene_id' => 'OT_08G02830',
'e_value' => '0.0',
'bit_score' => '818',
'alignment_length' => '957',
'identity_percentage' => '44.62',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OL08G02650' => array(
'gene_id' => 'OL08G02650',
'e_value' => '0.0',
'bit_score' => '806',
'alignment_length' => '845',
'identity_percentage' => '48.52',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSMUSG00000071650' => array(
'gene_id' => 'ENSMUSG00000071650',
'e_value' => '0.0',
'bit_score' => '798',
'alignment_length' => '976',
'identity_percentage' => '43.24',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'Naga_100017g38' => array(
'gene_id' => 'Naga_100017g38',
'e_value' => '0.0',
'bit_score' => '797',
'alignment_length' => '738',
'identity_percentage' => '52.03',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'MP05G06760' => array(
'gene_id' => 'MP05G06760',
'e_value' => '0.0',
'bit_score' => '796',
'alignment_length' => '1019',
'identity_percentage' => '43.47',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'FC002G01800' => array(
'gene_id' => 'FC002G01800',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '801',
'identity_percentage' => '48.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSMUSG00000062646' => array(
'gene_id' => 'ENSMUSG00000062646',
'e_value' => '0.0',
'bit_score' => '771',
'alignment_length' => '935',
'identity_percentage' => '42.14',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSG00000214013' => array(
'gene_id' => 'ENSG00000214013',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '937',
'identity_percentage' => '42.90',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'BPRRCC1105_01G07160' => array(
'gene_id' => 'BPRRCC1105_01G07160',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '941',
'identity_percentage' => '45.16',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ccr158380' => array(
'gene_id' => 'ccr158380',
'e_value' => '0.0',
'bit_score' => '751',
'alignment_length' => '763',
'identity_percentage' => '49.41',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'WBGene00009583' => array(
'gene_id' => 'WBGene00009583',
'e_value' => '0.0',
'bit_score' => '736',
'alignment_length' => '945',
'identity_percentage' => '41.16',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PTI_05G01610' => array(
'gene_id' => 'PTI_05G01610',
'e_value' => '0.0',
'bit_score' => '741',
'alignment_length' => '786',
'identity_percentage' => '47.07',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'TP07G02080' => array(
'gene_id' => 'TP07G02080',
'e_value' => '0.0',
'bit_score' => '733',
'alignment_length' => '748',
'identity_percentage' => '49.33',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'FBgn0027588' => array(
'gene_id' => 'FBgn0027588',
'e_value' => '0.0',
'bit_score' => '725',
'alignment_length' => '971',
'identity_percentage' => '39.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh160400' => array(
'gene_id' => 'emh160400',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh626580' => array(
'gene_id' => 'emh626580',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'WBGene00018682' => array(
'gene_id' => 'WBGene00018682',
'e_value' => '0.0',
'bit_score' => '722',
'alignment_length' => '880',
'identity_percentage' => '42.84',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'phs303660' => array(
'gene_id' => 'phs303660',
'e_value' => '0.0',
'bit_score' => '724',
'alignment_length' => '990',
'identity_percentage' => '42.42',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'HE0000G07800' => array(
'gene_id' => 'HE0000G07800',
'e_value' => '0.0',
'bit_score' => '685',
'alignment_length' => '791',
'identity_percentage' => '46.65',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AA0001G01930' => array(
'gene_id' => 'AA0001G01930',
'e_value' => '0.0',
'bit_score' => '701',
'alignment_length' => '668',
'identity_percentage' => '51.65',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AP00G19080' => array(
'gene_id' => 'AP00G19080',
'e_value' => '0.0',
'bit_score' => '669',
'alignment_length' => '660',
'identity_percentage' => '51.82',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'SPAC1002.03c' => array(
'gene_id' => 'SPAC1002.03c',
'e_value' => '0.0',
'bit_score' => '650',
'alignment_length' => '880',
'identity_percentage' => '39.66',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'gsu126010' => array(
'gene_id' => 'gsu126010',
'e_value' => '0.0',
'bit_score' => '637',
'alignment_length' => '922',
'identity_percentage' => '38.07',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CM13G00820' => array(
'gene_id' => 'CM13G00820',
'e_value' => '0.0',
'bit_score' => '600',
'alignment_length' => '987',
'identity_percentage' => '37.18',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'YBR229C' => array(
'gene_id' => 'YBR229C',
'e_value' => '0.0',
'bit_score' => '560',
'alignment_length' => '980',
'identity_percentage' => '34.08',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ES0080G00420' => array(
'gene_id' => 'ES0080G00420',
'e_value' => '9e-177',
'bit_score' => '530',
'alignment_length' => '572',
'identity_percentage' => '46.68',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ORCC809_08G02600' => array(
'gene_id' => 'ORCC809_08G02600',
'e_value' => '4e-152',
'bit_score' => '484',
'alignment_length' => '406',
'identity_percentage' => '57.39',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh472720' => array(
'gene_id' => 'emh472720',
'e_value' => '1e-131',
'bit_score' => '427',
'alignment_length' => '642',
'identity_percentage' => '38.63',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P209776'
)
),
'PP00242G00250' => array(
'gene_id' => 'PP00242G00250',
'e_value' => '5e-107',
'bit_score' => '361',
'alignment_length' => '496',
'identity_percentage' => '39.72',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00005G01250' => array(
'gene_id' => 'PP00005G01250',
'e_value' => '2e-102',
'bit_score' => '350',
'alignment_length' => '581',
'identity_percentage' => '36.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00041G01080' => array(
'gene_id' => 'PP00041G01080',
'e_value' => '5e-102',
'bit_score' => '349',
'alignment_length' => '496',
'identity_percentage' => '38.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00140G00390' => array(
'gene_id' => 'PP00140G00390',
'e_value' => '1e-101',
'bit_score' => '346',
'alignment_length' => '496',
'identity_percentage' => '37.90',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'AT3G23640' => array(
'gene_id' => 'AT3G23640',
'e_value' => '1e-97',
'bit_score' => '335',
'alignment_length' => '586',
'identity_percentage' => '34.98',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'OS06G46340' => array(
'gene_id' => 'OS06G46340',
'e_value' => '3e-95',
'bit_score' => '326',
'alignment_length' => '608',
'identity_percentage' => '35.20',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'DDB_G0269790' => array(
'gene_id' => 'DDB_G0269790',
'e_value' => '1e-94',
'bit_score' => '324',
'alignment_length' => '772',
'identity_percentage' => '29.79',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00060G00720' => array(
'gene_id' => 'PP00060G00720',
'e_value' => '2e-94',
'bit_score' => '326',
'alignment_length' => '522',
'identity_percentage' => '36.02',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'OS07G23944' => array(
'gene_id' => 'OS07G23944',
'e_value' => '5e-93',
'bit_score' => '322',
'alignment_length' => '615',
'identity_percentage' => '33.82',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'ATR_00048G01310' => array(
'gene_id' => 'ATR_00048G01310',
'e_value' => '6e-93',
'bit_score' => '323',
'alignment_length' => '495',
'identity_percentage' => '36.36',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00157G00350' => array(
'gene_id' => 'PP00157G00350',
'e_value' => '2e-92',
'bit_score' => '319',
'alignment_length' => '726',
'identity_percentage' => '31.82',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS07G23880' => array(
'gene_id' => 'OS07G23880',
'e_value' => '3e-92',
'bit_score' => '321',
'alignment_length' => '572',
'identity_percentage' => '35.14',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'AT5G11720' => array(
'gene_id' => 'AT5G11720',
'e_value' => '1e-90',
'bit_score' => '314',
'alignment_length' => '859',
'identity_percentage' => '29.57',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS06G46284' => array(
'gene_id' => 'OS06G46284',
'e_value' => '1e-90',
'bit_score' => '313',
'alignment_length' => '607',
'identity_percentage' => '34.27',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs293220' => array(
'gene_id' => 'phs293220',
'e_value' => '8e-90',
'bit_score' => '311',
'alignment_length' => '667',
'identity_percentage' => '31.33',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00092G00960' => array(
'gene_id' => 'ATR_00092G00960',
'e_value' => '2e-89',
'bit_score' => '310',
'alignment_length' => '657',
'identity_percentage' => '31.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs293240' => array(
'gene_id' => 'phs293240',
'e_value' => '2e-89',
'bit_score' => '314',
'alignment_length' => '682',
'identity_percentage' => '31.09',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00079G00110' => array(
'gene_id' => 'ATR_00079G00110',
'e_value' => '2e-89',
'bit_score' => '307',
'alignment_length' => '705',
'identity_percentage' => '31.91',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00264G00160' => array(
'gene_id' => 'PP00264G00160',
'e_value' => '9e-87',
'bit_score' => '303',
'alignment_length' => '736',
'identity_percentage' => '30.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00011G01860' => array(
'gene_id' => 'PP00011G01860',
'e_value' => '1e-86',
'bit_score' => '303',
'alignment_length' => '760',
'identity_percentage' => '30.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AT3G45940' => array(
'gene_id' => 'AT3G45940',
'e_value' => '1e-86',
'bit_score' => '302',
'alignment_length' => '862',
'identity_percentage' => '28.89',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00013G02430' => array(
'gene_id' => 'PP00013G02430',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '716',
'identity_percentage' => '30.31',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00264G00120' => array(
'gene_id' => 'PP00264G00120',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '746',
'identity_percentage' => '29.62',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00080G01120' => array(
'gene_id' => 'PP00080G01120',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '765',
'identity_percentage' => '30.07',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00025G00520' => array(
'gene_id' => 'PP00025G00520',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '740',
'identity_percentage' => '29.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS01G03950' => array(
'gene_id' => 'OS01G03950',
'e_value' => '1e-83',
'bit_score' => '295',
'alignment_length' => '706',
'identity_percentage' => '30.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00086G00660' => array(
'gene_id' => 'PP00086G00660',
'e_value' => '1e-83',
'bit_score' => '293',
'alignment_length' => '706',
'identity_percentage' => '30.03',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00119G00640' => array(
'gene_id' => 'PP00119G00640',
'e_value' => '2e-82',
'bit_score' => '291',
'alignment_length' => '729',
'identity_percentage' => '29.36',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AT1G68560' => array(
'gene_id' => 'AT1G68560',
'e_value' => '2e-81',
'bit_score' => '288',
'alignment_length' => '903',
'identity_percentage' => '27.13',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00006G00120' => array(
'gene_id' => 'PP00006G00120',
'e_value' => '2e-80',
'bit_score' => '285',
'alignment_length' => '723',
'identity_percentage' => '28.49',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CNC64A_025G00750' => array(
'gene_id' => 'CNC64A_025G00750',
'e_value' => '2e-80',
'bit_score' => '276',
'alignment_length' => '384',
'identity_percentage' => '44.53',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PP00245G00510' => array(
'gene_id' => 'PP00245G00510',
'e_value' => '4e-79',
'bit_score' => '281',
'alignment_length' => '747',
'identity_percentage' => '28.78',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00043G00100' => array(
'gene_id' => 'PP00043G00100',
'e_value' => '5e-78',
'bit_score' => '278',
'alignment_length' => '655',
'identity_percentage' => '30.69',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AC00G97780' => array(
'gene_id' => 'AC00G97780',
'e_value' => '9e-78',
'bit_score' => '277',
'alignment_length' => '586',
'identity_percentage' => '33.28',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AP00G35250' => array(
'gene_id' => 'AP00G35250',
'e_value' => '1e-77',
'bit_score' => '279',
'alignment_length' => '519',
'identity_percentage' => '34.87',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSMUSG00000068587' => array(
'gene_id' => 'ENSMUSG00000068587',
'e_value' => '2e-77',
'bit_score' => '282',
'alignment_length' => '935',
'identity_percentage' => '28.02',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00079G00080' => array(
'gene_id' => 'ATR_00079G00080',
'e_value' => '1e-76',
'bit_score' => '269',
'alignment_length' => '565',
'identity_percentage' => '32.57',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AC00G02390' => array(
'gene_id' => 'AC00G02390',
'e_value' => '2e-75',
'bit_score' => '265',
'alignment_length' => '555',
'identity_percentage' => '31.17',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSMUSG00000027790' => array(
'gene_id' => 'ENSMUSG00000027790',
'e_value' => '8e-75',
'bit_score' => '274',
'alignment_length' => '650',
'identity_percentage' => '31.38',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000257335' => array(
'gene_id' => 'ENSG00000257335',
'e_value' => '4e-74',
'bit_score' => '273',
'alignment_length' => '846',
'identity_percentage' => '28.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000090402' => array(
'gene_id' => 'ENSG00000090402',
'e_value' => '4e-70',
'bit_score' => '260',
'alignment_length' => '836',
'identity_percentage' => '29.19',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000278563' => array(
'gene_id' => 'ENSG00000278563',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000257743' => array(
'gene_id' => 'ENSG00000257743',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte388210' => array(
'gene_id' => 'pte388210',
'e_value' => '3e-67',
'bit_score' => '245',
'alignment_length' => '645',
'identity_percentage' => '27.60',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte323710' => array(
'gene_id' => 'pte323710',
'e_value' => '3e-66',
'bit_score' => '243',
'alignment_length' => '655',
'identity_percentage' => '26.72',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte374950' => array(
'gene_id' => 'pte374950',
'e_value' => '2e-65',
'bit_score' => '240',
'alignment_length' => '648',
'identity_percentage' => '27.47',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CNC64A_008G02740' => array(
'gene_id' => 'CNC64A_008G02740',
'e_value' => '2e-65',
'bit_score' => '244',
'alignment_length' => '634',
'identity_percentage' => '30.91',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G66180' => array(
'gene_id' => 'CV00G66180',
'e_value' => '5e-64',
'bit_score' => '237',
'alignment_length' => '743',
'identity_percentage' => '25.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G87890' => array(
'gene_id' => 'CV00G87890',
'e_value' => '3e-62',
'bit_score' => '231',
'alignment_length' => '629',
'identity_percentage' => '26.55',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'WBGene00017071' => array(
'gene_id' => 'WBGene00017071',
'e_value' => '5e-62',
'bit_score' => '231',
'alignment_length' => '684',
'identity_percentage' => '28.22',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte268290' => array(
'gene_id' => 'pte268290',
'e_value' => '2e-60',
'bit_score' => '225',
'alignment_length' => '593',
'identity_percentage' => '28.16',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte186640' => array(
'gene_id' => 'pte186640',
'e_value' => '1e-57',
'bit_score' => '217',
'alignment_length' => '598',
'identity_percentage' => '27.26',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'RCC4223.199g00040' => array(
'gene_id' => 'RCC4223.199g00040',
'e_value' => '3e-56',
'bit_score' => '212',
'alignment_length' => '497',
'identity_percentage' => '30.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'CV00G66200' => array(
'gene_id' => 'CV00G66200',
'e_value' => '6e-56',
'bit_score' => '209',
'alignment_length' => '659',
'identity_percentage' => '27.01',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte70280' => array(
'gene_id' => 'pte70280',
'e_value' => '3e-50',
'bit_score' => '194',
'alignment_length' => '678',
'identity_percentage' => '26.55',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P050433'
)
),
'CNC64A_019G00790' => array(
'gene_id' => 'CNC64A_019G00790',
'e_value' => '2e-49',
'bit_score' => '183',
'alignment_length' => '345',
'identity_percentage' => '33.33',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P080455'
)
),
'SPAC1039.11c' => array(
'gene_id' => 'SPAC1039.11c',
'e_value' => '3e-49',
'bit_score' => '193',
'alignment_length' => '298',
'identity_percentage' => '37.58',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'SPAC30D11.01c' => array(
'gene_id' => 'SPAC30D11.01c',
'e_value' => '9e-48',
'bit_score' => '188',
'alignment_length' => '352',
'identity_percentage' => '33.81',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00281G00070' => array(
'gene_id' => 'PP00281G00070',
'e_value' => '3e-47',
'bit_score' => '181',
'alignment_length' => '501',
'identity_percentage' => '28.54',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'SPAPB24D3.10c' => array(
'gene_id' => 'SPAPB24D3.10c',
'e_value' => '3e-47',
'bit_score' => '187',
'alignment_length' => '360',
'identity_percentage' => '33.06',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte180100' => array(
'gene_id' => 'pte180100',
'e_value' => '6e-47',
'bit_score' => '185',
'alignment_length' => '734',
'identity_percentage' => '26.57',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P050433'
)
),
'WBGene00019895' => array(
'gene_id' => 'WBGene00019895',
'e_value' => '2e-45',
'bit_score' => '181',
'alignment_length' => '683',
'identity_percentage' => '25.92',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs92320' => array(
'gene_id' => 'phs92320',
'e_value' => '8e-45',
'bit_score' => '179',
'alignment_length' => '332',
'identity_percentage' => '34.34',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P174336'
)
),
'gsu139510' => array(
'gene_id' => 'gsu139510',
'e_value' => '2e-42',
'bit_score' => '171',
'alignment_length' => '475',
'identity_percentage' => '27.16',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'CV00G74030' => array(
'gene_id' => 'CV00G74030',
'e_value' => '2e-41',
'bit_score' => '169',
'alignment_length' => '291',
'identity_percentage' => '34.71',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'HE0000G25410' => array(
'gene_id' => 'HE0000G25410',
'e_value' => '9e-41',
'bit_score' => '164',
'alignment_length' => '451',
'identity_percentage' => '27.94',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G33310' => array(
'gene_id' => 'CV00G33310',
'e_value' => '3e-39',
'bit_score' => '162',
'alignment_length' => '359',
'identity_percentage' => '30.92',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'emh746930' => array(
'gene_id' => 'emh746930',
'e_value' => '2e-38',
'bit_score' => '159',
'alignment_length' => '352',
'identity_percentage' => '32.39',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'emh564800' => array(
'gene_id' => 'emh564800',
'e_value' => '3e-37',
'bit_score' => '155',
'alignment_length' => '352',
'identity_percentage' => '32.10',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'emh552990' => array(
'gene_id' => 'emh552990',
'e_value' => '4e-37',
'bit_score' => '154',
'alignment_length' => '511',
'identity_percentage' => '27.79',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P201802'
)
),
'phs71110' => array(
'gene_id' => 'phs71110',
'e_value' => '6e-33',
'bit_score' => '141',
'alignment_length' => '398',
'identity_percentage' => '29.90',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P051673'
)
),
'CR03G11570' => array(
'gene_id' => 'CR03G11570',
'e_value' => '1e-32',
'bit_score' => '141',
'alignment_length' => '263',
'identity_percentage' => '33.46',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CM06G01210' => array(
'gene_id' => 'CM06G01210',
'e_value' => '1e-27',
'bit_score' => '125',
'alignment_length' => '470',
'identity_percentage' => '26.38',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'gsu63580' => array(
'gene_id' => 'gsu63580',
'e_value' => '4e-27',
'bit_score' => '122',
'alignment_length' => '561',
'identity_percentage' => '22.82',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'Naga_100114g11' => array(
'gene_id' => 'Naga_100114g11',
'e_value' => '2e-24',
'bit_score' => '114',
'alignment_length' => '434',
'identity_percentage' => '25.81',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_288G00010' => array(
'gene_id' => 'CNC64A_288G00010',
'e_value' => '7e-24',
'bit_score' => '106',
'alignment_length' => '193',
'identity_percentage' => '36.27',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P079153'
)
),
'phs71090' => array(
'gene_id' => 'phs71090',
'e_value' => '4e-23',
'bit_score' => '107',
'alignment_length' => '260',
'identity_percentage' => '26.92',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P104467'
)
),
'MP05G04870' => array(
'gene_id' => 'MP05G04870',
'e_value' => '2e-22',
'bit_score' => '107',
'alignment_length' => '398',
'identity_percentage' => '25.63',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OT_04G02420' => array(
'gene_id' => 'OT_04G02420',
'e_value' => '1e-21',
'bit_score' => '104',
'alignment_length' => '372',
'identity_percentage' => '26.61',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MP08G03280' => array(
'gene_id' => 'MP08G03280',
'e_value' => '7e-21',
'bit_score' => '102',
'alignment_length' => '440',
'identity_percentage' => '25.91',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ORCC809_04G02780' => array(
'gene_id' => 'ORCC809_04G02780',
'e_value' => '9e-21',
'bit_score' => '100',
'alignment_length' => '408',
'identity_percentage' => '25.25',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OT_08G03880' => array(
'gene_id' => 'OT_08G03880',
'e_value' => '2e-20',
'bit_score' => '101',
'alignment_length' => '357',
'identity_percentage' => '24.65',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OM_16G02430' => array(
'gene_id' => 'OM_16G02430',
'e_value' => '3e-20',
'bit_score' => '100',
'alignment_length' => '362',
'identity_percentage' => '25.97',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OL04G02410' => array(
'gene_id' => 'OL04G02410',
'e_value' => '6e-20',
'bit_score' => '97.4',
'alignment_length' => '405',
'identity_percentage' => '24.69',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MRCC299_11G02870' => array(
'gene_id' => 'MRCC299_11G02870',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '413',
'identity_percentage' => '27.60',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'emh123040' => array(
'gene_id' => 'emh123040',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '216',
'identity_percentage' => '31.94',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P048023'
)
),
'emh362880' => array(
'gene_id' => 'emh362880',
'e_value' => '2e-19',
'bit_score' => '98.2',
'alignment_length' => '190',
'identity_percentage' => '33.16',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P048023'
)
),
'gsu137050' => array(
'gene_id' => 'gsu137050',
'e_value' => '2e-19',
'bit_score' => '97.8',
'alignment_length' => '390',
'identity_percentage' => '24.62',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'gsu133460' => array(
'gene_id' => 'gsu133460',
'e_value' => '2e-18',
'bit_score' => '91.7',
'alignment_length' => '255',
'identity_percentage' => '27.84',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'PP00041G01100' => array(
'gene_id' => 'PP00041G01100',
'e_value' => '6e-18',
'bit_score' => '93.6',
'alignment_length' => '499',
'identity_percentage' => '24.05',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'BPRRCC1105_06G04670' => array(
'gene_id' => 'BPRRCC1105_06G04670',
'e_value' => '7e-18',
'bit_score' => '93.2',
'alignment_length' => '398',
'identity_percentage' => '24.87',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MRCC299_08G03350' => array(
'gene_id' => 'MRCC299_08G03350',
'e_value' => '1e-17',
'bit_score' => '92.0',
'alignment_length' => '403',
'identity_percentage' => '25.56',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'ORCC809_12G00530' => array(
'gene_id' => 'ORCC809_12G00530',
'e_value' => '1e-17',
'bit_score' => '92.4',
'alignment_length' => '368',
'identity_percentage' => '26.36',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_034G00570' => array(
'gene_id' => 'CNC64A_034G00570',
'e_value' => '1e-17',
'bit_score' => '84.7',
'alignment_length' => '79',
'identity_percentage' => '49.37',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P113797'
)
),
'OL08G03830' => array(
'gene_id' => 'OL08G03830',
'e_value' => '2e-17',
'bit_score' => '90.9',
'alignment_length' => '572',
'identity_percentage' => '22.73',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'FBgn0261575' => array(
'gene_id' => 'FBgn0261575',
'e_value' => '5e-17',
'bit_score' => '90.1',
'alignment_length' => '379',
'identity_percentage' => '24.80',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ORCC809_05G02990' => array(
'gene_id' => 'ORCC809_05G02990',
'e_value' => '5e-17',
'bit_score' => '90.5',
'alignment_length' => '213',
'identity_percentage' => '31.92',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OL05G03060' => array(
'gene_id' => 'OL05G03060',
'e_value' => '6e-17',
'bit_score' => '89.4',
'alignment_length' => '387',
'identity_percentage' => '28.68',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'CV00G34570' => array(
'gene_id' => 'CV00G34570',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OM_02G02640' => array(
'gene_id' => 'OM_02G02640',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '368',
'identity_percentage' => '25.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ENSMUSG00000046312' => array(
'gene_id' => 'ENSMUSG00000046312',
'e_value' => '8e-17',
'bit_score' => '89.4',
'alignment_length' => '398',
'identity_percentage' => '24.12',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'RCC4223.09g03870' => array(
'gene_id' => 'RCC4223.09g03870',
'e_value' => '4e-16',
'bit_score' => '87.4',
'alignment_length' => '198',
'identity_percentage' => '33.33',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ENSG00000164976' => array(
'gene_id' => 'ENSG00000164976',
'e_value' => '5e-16',
'bit_score' => '87.0',
'alignment_length' => '395',
'identity_percentage' => '23.80',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OM_03G03260' => array(
'gene_id' => 'OM_03G03260',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '207',
'identity_percentage' => '31.40',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'BPRRCC1105_01G05990' => array(
'gene_id' => 'BPRRCC1105_01G05990',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '353',
'identity_percentage' => '23.51',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'PI00G61580' => array(
'gene_id' => 'PI00G61580',
'e_value' => '3e-15',
'bit_score' => '84.7',
'alignment_length' => '198',
'identity_percentage' => '32.83',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ATR_00095G00110' => array(
'gene_id' => 'ATR_00095G00110',
'e_value' => '5e-14',
'bit_score' => '80.5',
'alignment_length' => '461',
'identity_percentage' => '22.34',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_034G00560' => array(
'gene_id' => 'CNC64A_034G00560',
'e_value' => '5e-13',
'bit_score' => '76.6',
'alignment_length' => '343',
'identity_percentage' => '23.03',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P158659'
)
),
'PP00065G00350' => array(
'gene_id' => 'PP00065G00350',
'e_value' => '1e-12',
'bit_score' => '75.1',
'alignment_length' => '311',
'identity_percentage' => '21.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P159804'
)
),
'FC006G00220' => array(
'gene_id' => 'FC006G00220',
'e_value' => '1e-12',
'bit_score' => '76.3',
'alignment_length' => '314',
'identity_percentage' => '25.16',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'CNC64A_529G00010' => array(
'gene_id' => 'CNC64A_529G00010',
'e_value' => '2e-12',
'bit_score' => '70.5',
'alignment_length' => '89',
'identity_percentage' => '41.57',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P106179'
)
),
'OT_05G03110' => array(
'gene_id' => 'OT_05G03110',
'e_value' => '2e-11',
'bit_score' => '72.0',
'alignment_length' => '216',
'identity_percentage' => '29.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'CM13G02020' => array(
'gene_id' => 'CM13G02020',
'e_value' => '8e-10',
'bit_score' => '67.0',
'alignment_length' => '218',
'identity_percentage' => '26.61',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P093918'
)
),
'FBgn0053080' => array(
'gene_id' => 'FBgn0053080',
'e_value' => '1e-09',
'bit_score' => '66.6',
'alignment_length' => '400',
'identity_percentage' => '22.50',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P200983'
)
),
'emh755690' => array(
'gene_id' => 'emh755690',
'e_value' => '2e-09',
'bit_score' => '65.5',
'alignment_length' => '232',
'identity_percentage' => '26.29',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P144442'
)
),
'MP02G01920' => array(
'gene_id' => 'MP02G01920',
'e_value' => '3e-09',
'bit_score' => '65.1',
'alignment_length' => '223',
'identity_percentage' => '26.46',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'pte584840' => array(
'gene_id' => 'pte584840',
'e_value' => '2e-08',
'bit_score' => '62.4',
'alignment_length' => '495',
'identity_percentage' => '18.59',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P110780'
)
),
'emh344740' => array(
'gene_id' => 'emh344740',
'e_value' => '4e-08',
'bit_score' => '61.2',
'alignment_length' => '304',
'identity_percentage' => '23.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'ccr117820' => array(
'gene_id' => 'ccr117820',
'e_value' => '1e-07',
'bit_score' => '59.7',
'alignment_length' => '423',
'identity_percentage' => '23.64',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'AA0007G01760' => array(
'gene_id' => 'AA0007G01760',
'e_value' => '4e-07',
'bit_score' => '58.2',
'alignment_length' => '411',
'identity_percentage' => '23.36',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
)
)
$similarity_hits_species = array(
'ath' => array(
(int) 0 => 'AT5G63840',
(int) 1 => 'AT3G23640',
(int) 2 => 'AT5G11720',
(int) 3 => 'AT3G45940',
(int) 4 => 'AT1G68560'
),
'atr' => array(
(int) 0 => 'ATR_00065G01570',
(int) 1 => 'ATR_00048G01310',
(int) 2 => 'ATR_00092G00960',
(int) 3 => 'ATR_00079G00110',
(int) 4 => 'ATR_00079G00080',
(int) 5 => 'ATR_00095G00110'
),
'osa' => array(
(int) 0 => 'OS03G11720',
(int) 1 => 'OS06G46340',
(int) 2 => 'OS07G23944',
(int) 3 => 'OS07G23880',
(int) 4 => 'OS06G46284',
(int) 5 => 'OS01G03950'
),
'ppa' => array(
(int) 0 => 'PP00109G00830',
(int) 1 => 'PP00242G00250',
(int) 2 => 'PP00005G01250',
(int) 3 => 'PP00041G01080',
(int) 4 => 'PP00140G00390',
(int) 5 => 'PP00060G00720',
(int) 6 => 'PP00157G00350',
(int) 7 => 'PP00264G00160',
(int) 8 => 'PP00011G01860',
(int) 9 => 'PP00013G02430',
(int) 10 => 'PP00264G00120',
(int) 11 => 'PP00080G01120',
(int) 12 => 'PP00025G00520',
(int) 13 => 'PP00086G00660',
(int) 14 => 'PP00119G00640',
(int) 15 => 'PP00006G00120',
(int) 16 => 'PP00245G00510',
(int) 17 => 'PP00043G00100',
(int) 18 => 'PP00281G00070',
(int) 19 => 'PP00041G01100',
(int) 20 => 'PP00065G00350'
),
'acg' => array(
(int) 0 => 'AC00G77390',
(int) 1 => 'AC00G97780',
(int) 2 => 'AC00G02390'
),
'vca' => array(
(int) 0 => 'VC00G110660'
),
'cvu' => array(
(int) 0 => 'CV00G24690',
(int) 1 => 'CV00G66180',
(int) 2 => 'CV00G87890',
(int) 3 => 'CV00G66200',
(int) 4 => 'CV00G74030',
(int) 5 => 'CV00G33310',
(int) 6 => 'CV00G34570'
),
'pse3' => array(
(int) 0 => 'PI00G24040',
(int) 1 => 'PI00G61580'
),
'ddi' => array(
(int) 0 => 'DDB_G0269154',
(int) 1 => 'DDB_G0269790'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g01620',
(int) 1 => 'RCC4223.199g00040',
(int) 2 => 'RCC4223.09g03870'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_08G05390',
(int) 1 => 'MRCC299_11G02870',
(int) 2 => 'MRCC299_08G03350'
),
'cre' => array(
(int) 0 => 'CR03G10710',
(int) 1 => 'CR03G11570'
),
'ome' => array(
(int) 0 => 'OM_16G01380',
(int) 1 => 'OM_16G02430',
(int) 2 => 'OM_02G02640',
(int) 3 => 'OM_03G03260'
),
'ota' => array(
(int) 0 => 'OT_08G02830',
(int) 1 => 'OT_04G02420',
(int) 2 => 'OT_08G03880',
(int) 3 => 'OT_05G03110'
),
'olu' => array(
(int) 0 => 'OL08G02650',
(int) 1 => 'OL04G02410',
(int) 2 => 'OL08G03830',
(int) 3 => 'OL05G03060'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000071650',
(int) 1 => 'ENSMUSG00000062646',
(int) 2 => 'ENSMUSG00000068587',
(int) 3 => 'ENSMUSG00000027790',
(int) 4 => 'ENSMUSG00000046312'
),
'nga' => array(
(int) 0 => 'Naga_100017g38',
(int) 1 => 'Naga_100114g11'
),
'mpu' => array(
(int) 0 => 'MP05G06760',
(int) 1 => 'MP05G04870',
(int) 2 => 'MP08G03280',
(int) 3 => 'MP02G01920'
),
'fcy' => array(
(int) 0 => 'FC002G01800',
(int) 1 => 'FC006G00220'
),
'hom' => array(
(int) 0 => 'ENSG00000214013',
(int) 1 => 'ENSG00000257335',
(int) 2 => 'ENSG00000090402',
(int) 3 => 'ENSG00000278563',
(int) 4 => 'ENSG00000257743',
(int) 5 => 'ENSG00000164976'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_01G07160',
(int) 1 => 'BPRRCC1105_06G04670',
(int) 2 => 'BPRRCC1105_01G05990'
),
'ccr' => array(
(int) 0 => 'ccr158380',
(int) 1 => 'ccr117820'
),
'cel' => array(
(int) 0 => 'WBGene00009583',
(int) 1 => 'WBGene00018682',
(int) 2 => 'WBGene00017071',
(int) 3 => 'WBGene00019895'
),
'ptri' => array(
(int) 0 => 'PTI_05G01610'
),
'tps' => array(
(int) 0 => 'TP07G02080'
),
'drm' => array(
(int) 0 => 'FBgn0027588',
(int) 1 => 'FBgn0261575',
(int) 2 => 'FBgn0053080'
),
'emh' => array(
(int) 0 => 'emh160400',
(int) 1 => 'emh626580',
(int) 2 => 'emh472720',
(int) 3 => 'emh746930',
(int) 4 => 'emh564800',
(int) 5 => 'emh552990',
(int) 6 => 'emh123040',
(int) 7 => 'emh362880',
(int) 8 => 'emh755690',
(int) 9 => 'emh344740'
),
'phs' => array(
(int) 0 => 'phs303660',
(int) 1 => 'phs293220',
(int) 2 => 'phs293240',
(int) 3 => 'phs92320',
(int) 4 => 'phs71110',
(int) 5 => 'phs71090'
),
'hsp' => array(
(int) 0 => 'HE0000G07800',
(int) 1 => 'HE0000G25410'
),
'aan' => array(
(int) 0 => 'AA0001G01930',
(int) 1 => 'AA0007G01760'
),
'apr' => array(
(int) 0 => 'AP00G19080',
(int) 1 => 'AP00G35250'
),
'scp' => array(
(int) 0 => 'SPAC1002.03c',
(int) 1 => 'SPAC1039.11c',
(int) 2 => 'SPAC30D11.01c',
(int) 3 => 'SPAPB24D3.10c'
),
'gsu' => array(
(int) 0 => 'gsu126010',
(int) 1 => 'gsu139510',
(int) 2 => 'gsu63580',
(int) 3 => 'gsu137050',
(int) 4 => 'gsu133460'
),
'cme' => array(
(int) 0 => 'CM13G00820',
(int) 1 => 'CM06G01210',
(int) 2 => 'CM13G02020'
),
'sac' => array(
(int) 0 => 'YBR229C'
),
'esi' => array(
(int) 0 => 'ES0080G00420'
),
'orcc809' => array(
(int) 0 => 'ORCC809_08G02600',
(int) 1 => 'ORCC809_04G02780',
(int) 2 => 'ORCC809_12G00530',
(int) 3 => 'ORCC809_05G02990'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_025G00750',
(int) 1 => 'CNC64A_008G02740',
(int) 2 => 'CNC64A_019G00790',
(int) 3 => 'CNC64A_034G00570',
(int) 4 => 'CNC64A_034G00560'
),
'pte' => array(
(int) 0 => 'pte388210',
(int) 1 => 'pte323710',
(int) 2 => 'pte374950',
(int) 3 => 'pte268290',
(int) 4 => 'pte186640',
(int) 5 => 'pte70280',
(int) 6 => 'pte180100',
(int) 7 => 'pte584840'
)
)
$gene_id = 'AT5G63840'
$all_species_index = array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$all_species = array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$gene_family_types_information = array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
)
$gene_family_types_configuration = array()
$data_identifier = 'AT5G63840'
$data_type = 'gene_id'
$allow_async_use = true
$gene_placeholder = 'ES0116G00040'
$gf_placeholder = 'HOM03P017607'
$title_for_layout = 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
$collapse1 = ''
$collapse2 = 'collapse in'
$similarity_hit = array(
'gene_id' => 'CNC64A_288G00010',
'e_value' => '7e-24',
'bit_score' => '106',
'alignment_length' => '193',
'identity_percentage' => '36.27',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P079153'
)
)
$checked = null
$similarity_hit_gene = 'CNC64A_288G00010'
include - APP/View/Analysis/custom_tree_creation.ctp, line 169
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::render() - CORE/Cake/View/View.php, line 473
Controller::render() - CORE/Cake/Controller/Controller.php, line 963
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167
[main] - APP/webroot/index.php, line 146
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]Code Context echo "<td><input type='checkbox' name='selected_genes[]' value='".$similarity_hit['gene_id']."' ".$checked." /></td>\n";
echo "<td>".$this->Html->link($similarity_hit_gene,array("controller"=>"genes","action"=>"view",$similarity_hit_gene),array("target"=>"_blank"))."</td>\n";
echo "<td>".$this->Html->link($similarity_hit['common_name'],array("controller"=>"organism","action"=>"view",urlencode($similarity_hit['common_name'])))."</td>\n";
$viewFile = '/xtras/group/biocomp/plaza/versions/plaza_pico_03/app/View/Analysis/custom_tree_creation.ctp'
$dataForView = array(
'allowed_extra_sequences_types' => array(
'aa' => 'Protein',
'dna' => 'DNA'
),
'allowed_editing_methods' => array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
),
'allowed_tree_programs' => array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
),
'allowed_msa_programs' => array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
),
'allowed_number_blasthits' => array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
),
'similarity_hits_genes' => array(
'AT5G63840' => array(
'gene_id' => 'AT5G63840',
'e_value' => '0.0',
'bit_score' => '1909',
'alignment_length' => '922',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00065G01570' => array(
'gene_id' => 'ATR_00065G01570',
'e_value' => '0.0',
'bit_score' => '1308',
'alignment_length' => '909',
'identity_percentage' => '67.88',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'OS03G11720' => array(
'gene_id' => 'OS03G11720',
'e_value' => '0.0',
'bit_score' => '1258',
'alignment_length' => '920',
'identity_percentage' => '66.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00109G00830' => array(
'gene_id' => 'PP00109G00830',
'e_value' => '0.0',
'bit_score' => '1146',
'alignment_length' => '945',
'identity_percentage' => '59.15',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AC00G77390' => array(
'gene_id' => 'AC00G77390',
'e_value' => '0.0',
'bit_score' => '879',
'alignment_length' => '925',
'identity_percentage' => '48.54',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'VC00G110660' => array(
'gene_id' => 'VC00G110660',
'e_value' => '0.0',
'bit_score' => '865',
'alignment_length' => '939',
'identity_percentage' => '48.78',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CV00G24690' => array(
'gene_id' => 'CV00G24690',
'e_value' => '0.0',
'bit_score' => '856',
'alignment_length' => '933',
'identity_percentage' => '48.77',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'PI00G24040' => array(
'gene_id' => 'PI00G24040',
'e_value' => '0.0',
'bit_score' => '852',
'alignment_length' => '938',
'identity_percentage' => '47.33',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0269154' => array(
'gene_id' => 'DDB_G0269154',
'e_value' => '0.0',
'bit_score' => '847',
'alignment_length' => '979',
'identity_percentage' => '45.45',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.04g01620' => array(
'gene_id' => 'RCC4223.04g01620',
'e_value' => '0.0',
'bit_score' => '845',
'alignment_length' => '942',
'identity_percentage' => '46.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_08G05390' => array(
'gene_id' => 'MRCC299_08G05390',
'e_value' => '0.0',
'bit_score' => '833',
'alignment_length' => '949',
'identity_percentage' => '46.58',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'CR03G10710' => array(
'gene_id' => 'CR03G10710',
'e_value' => '0.0',
'bit_score' => '831',
'alignment_length' => '920',
'identity_percentage' => '49.13',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OM_16G01380' => array(
'gene_id' => 'OM_16G01380',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '983',
'identity_percentage' => '44.25',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OT_08G02830' => array(
'gene_id' => 'OT_08G02830',
'e_value' => '0.0',
'bit_score' => '818',
'alignment_length' => '957',
'identity_percentage' => '44.62',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OL08G02650' => array(
'gene_id' => 'OL08G02650',
'e_value' => '0.0',
'bit_score' => '806',
'alignment_length' => '845',
'identity_percentage' => '48.52',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000071650' => array(
'gene_id' => 'ENSMUSG00000071650',
'e_value' => '0.0',
'bit_score' => '798',
'alignment_length' => '976',
'identity_percentage' => '43.24',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100017g38' => array(
'gene_id' => 'Naga_100017g38',
'e_value' => '0.0',
'bit_score' => '797',
'alignment_length' => '738',
'identity_percentage' => '52.03',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'MP05G06760' => array(
'gene_id' => 'MP05G06760',
'e_value' => '0.0',
'bit_score' => '796',
'alignment_length' => '1019',
'identity_percentage' => '43.47',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'FC002G01800' => array(
'gene_id' => 'FC002G01800',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '801',
'identity_percentage' => '48.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000062646' => array(
'gene_id' => 'ENSMUSG00000062646',
'e_value' => '0.0',
'bit_score' => '771',
'alignment_length' => '935',
'identity_percentage' => '42.14',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000214013' => array(
'gene_id' => 'ENSG00000214013',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '937',
'identity_percentage' => '42.90',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_01G07160' => array(
'gene_id' => 'BPRRCC1105_01G07160',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '941',
'identity_percentage' => '45.16',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'ccr158380' => array(
'gene_id' => 'ccr158380',
'e_value' => '0.0',
'bit_score' => '751',
'alignment_length' => '763',
'identity_percentage' => '49.41',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00009583' => array(
'gene_id' => 'WBGene00009583',
'e_value' => '0.0',
'bit_score' => '736',
'alignment_length' => '945',
'identity_percentage' => '41.16',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'PTI_05G01610' => array(
'gene_id' => 'PTI_05G01610',
'e_value' => '0.0',
'bit_score' => '741',
'alignment_length' => '786',
'identity_percentage' => '47.07',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'TP07G02080' => array(
'gene_id' => 'TP07G02080',
'e_value' => '0.0',
'bit_score' => '733',
'alignment_length' => '748',
'identity_percentage' => '49.33',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0027588' => array(
'gene_id' => 'FBgn0027588',
'e_value' => '0.0',
'bit_score' => '725',
'alignment_length' => '971',
'identity_percentage' => '39.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'emh160400' => array(
'gene_id' => 'emh160400',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh626580' => array(
'gene_id' => 'emh626580',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00018682' => array(
'gene_id' => 'WBGene00018682',
'e_value' => '0.0',
'bit_score' => '722',
'alignment_length' => '880',
'identity_percentage' => '42.84',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'phs303660' => array(
'gene_id' => 'phs303660',
'e_value' => '0.0',
'bit_score' => '724',
'alignment_length' => '990',
'identity_percentage' => '42.42',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G07800' => array(
'gene_id' => 'HE0000G07800',
'e_value' => '0.0',
'bit_score' => '685',
'alignment_length' => '791',
'identity_percentage' => '46.65',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'AA0001G01930' => array(
'gene_id' => 'AA0001G01930',
'e_value' => '0.0',
'bit_score' => '701',
'alignment_length' => '668',
'identity_percentage' => '51.65',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'AP00G19080' => array(
'gene_id' => 'AP00G19080',
'e_value' => '0.0',
'bit_score' => '669',
'alignment_length' => '660',
'identity_percentage' => '51.82',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'SPAC1002.03c' => array(
'gene_id' => 'SPAC1002.03c',
'e_value' => '0.0',
'bit_score' => '650',
'alignment_length' => '880',
'identity_percentage' => '39.66',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'gsu126010' => array(
'gene_id' => 'gsu126010',
'e_value' => '0.0',
'bit_score' => '637',
'alignment_length' => '922',
'identity_percentage' => '38.07',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CM13G00820' => array(
'gene_id' => 'CM13G00820',
'e_value' => '0.0',
'bit_score' => '600',
'alignment_length' => '987',
'identity_percentage' => '37.18',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'YBR229C' => array(
'gene_id' => 'YBR229C',
'e_value' => '0.0',
'bit_score' => '560',
'alignment_length' => '980',
'identity_percentage' => '34.08',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
[maximum depth reached]
)
),
'ES0080G00420' => array(
'gene_id' => 'ES0080G00420',
'e_value' => '9e-177',
'bit_score' => '530',
'alignment_length' => '572',
'identity_percentage' => '46.68',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_08G02600' => array(
'gene_id' => 'ORCC809_08G02600',
'e_value' => '4e-152',
'bit_score' => '484',
'alignment_length' => '406',
'identity_percentage' => '57.39',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'emh472720' => array(
'gene_id' => 'emh472720',
'e_value' => '1e-131',
'bit_score' => '427',
'alignment_length' => '642',
'identity_percentage' => '38.63',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'PP00242G00250' => array(
'gene_id' => 'PP00242G00250',
'e_value' => '5e-107',
'bit_score' => '361',
'alignment_length' => '496',
'identity_percentage' => '39.72',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00005G01250' => array(
'gene_id' => 'PP00005G01250',
'e_value' => '2e-102',
'bit_score' => '350',
'alignment_length' => '581',
'identity_percentage' => '36.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00041G01080' => array(
'gene_id' => 'PP00041G01080',
'e_value' => '5e-102',
'bit_score' => '349',
'alignment_length' => '496',
'identity_percentage' => '38.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00140G00390' => array(
'gene_id' => 'PP00140G00390',
'e_value' => '1e-101',
'bit_score' => '346',
'alignment_length' => '496',
'identity_percentage' => '37.90',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT3G23640' => array(
'gene_id' => 'AT3G23640',
'e_value' => '1e-97',
'bit_score' => '335',
'alignment_length' => '586',
'identity_percentage' => '34.98',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'OS06G46340' => array(
'gene_id' => 'OS06G46340',
'e_value' => '3e-95',
'bit_score' => '326',
'alignment_length' => '608',
'identity_percentage' => '35.20',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0269790' => array(
'gene_id' => 'DDB_G0269790',
'e_value' => '1e-94',
'bit_score' => '324',
'alignment_length' => '772',
'identity_percentage' => '29.79',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'PP00060G00720' => array(
'gene_id' => 'PP00060G00720',
'e_value' => '2e-94',
'bit_score' => '326',
'alignment_length' => '522',
'identity_percentage' => '36.02',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS07G23944' => array(
'gene_id' => 'OS07G23944',
'e_value' => '5e-93',
'bit_score' => '322',
'alignment_length' => '615',
'identity_percentage' => '33.82',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00048G01310' => array(
'gene_id' => 'ATR_00048G01310',
'e_value' => '6e-93',
'bit_score' => '323',
'alignment_length' => '495',
'identity_percentage' => '36.36',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'PP00157G00350' => array(
'gene_id' => 'PP00157G00350',
'e_value' => '2e-92',
'bit_score' => '319',
'alignment_length' => '726',
'identity_percentage' => '31.82',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS07G23880' => array(
'gene_id' => 'OS07G23880',
'e_value' => '3e-92',
'bit_score' => '321',
'alignment_length' => '572',
'identity_percentage' => '35.14',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'AT5G11720' => array(
'gene_id' => 'AT5G11720',
'e_value' => '1e-90',
'bit_score' => '314',
'alignment_length' => '859',
'identity_percentage' => '29.57',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'OS06G46284' => array(
'gene_id' => 'OS06G46284',
'e_value' => '1e-90',
'bit_score' => '313',
'alignment_length' => '607',
'identity_percentage' => '34.27',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'phs293220' => array(
'gene_id' => 'phs293220',
'e_value' => '8e-90',
'bit_score' => '311',
'alignment_length' => '667',
'identity_percentage' => '31.33',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00092G00960' => array(
'gene_id' => 'ATR_00092G00960',
'e_value' => '2e-89',
'bit_score' => '310',
'alignment_length' => '657',
'identity_percentage' => '31.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'phs293240' => array(
'gene_id' => 'phs293240',
'e_value' => '2e-89',
'bit_score' => '314',
'alignment_length' => '682',
'identity_percentage' => '31.09',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00079G00110' => array(
'gene_id' => 'ATR_00079G00110',
'e_value' => '2e-89',
'bit_score' => '307',
'alignment_length' => '705',
'identity_percentage' => '31.91',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'PP00264G00160' => array(
'gene_id' => 'PP00264G00160',
'e_value' => '9e-87',
'bit_score' => '303',
'alignment_length' => '736',
'identity_percentage' => '30.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00011G01860' => array(
'gene_id' => 'PP00011G01860',
'e_value' => '1e-86',
'bit_score' => '303',
'alignment_length' => '760',
'identity_percentage' => '30.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT3G45940' => array(
'gene_id' => 'AT3G45940',
'e_value' => '1e-86',
'bit_score' => '302',
'alignment_length' => '862',
'identity_percentage' => '28.89',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'PP00013G02430' => array(
'gene_id' => 'PP00013G02430',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '716',
'identity_percentage' => '30.31',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00264G00120' => array(
'gene_id' => 'PP00264G00120',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '746',
'identity_percentage' => '29.62',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00080G01120' => array(
'gene_id' => 'PP00080G01120',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '765',
'identity_percentage' => '30.07',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00025G00520' => array(
'gene_id' => 'PP00025G00520',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '740',
'identity_percentage' => '29.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS01G03950' => array(
'gene_id' => 'OS01G03950',
'e_value' => '1e-83',
'bit_score' => '295',
'alignment_length' => '706',
'identity_percentage' => '30.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00086G00660' => array(
'gene_id' => 'PP00086G00660',
'e_value' => '1e-83',
'bit_score' => '293',
'alignment_length' => '706',
'identity_percentage' => '30.03',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00119G00640' => array(
'gene_id' => 'PP00119G00640',
'e_value' => '2e-82',
'bit_score' => '291',
'alignment_length' => '729',
'identity_percentage' => '29.36',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT1G68560' => array(
'gene_id' => 'AT1G68560',
'e_value' => '2e-81',
'bit_score' => '288',
'alignment_length' => '903',
'identity_percentage' => '27.13',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'PP00006G00120' => array(
'gene_id' => 'PP00006G00120',
'e_value' => '2e-80',
'bit_score' => '285',
'alignment_length' => '723',
'identity_percentage' => '28.49',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_025G00750' => array(
'gene_id' => 'CNC64A_025G00750',
'e_value' => '2e-80',
'bit_score' => '276',
'alignment_length' => '384',
'identity_percentage' => '44.53',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'PP00245G00510' => array(
'gene_id' => 'PP00245G00510',
'e_value' => '4e-79',
'bit_score' => '281',
'alignment_length' => '747',
'identity_percentage' => '28.78',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00043G00100' => array(
'gene_id' => 'PP00043G00100',
'e_value' => '5e-78',
'bit_score' => '278',
'alignment_length' => '655',
'identity_percentage' => '30.69',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AC00G97780' => array(
'gene_id' => 'AC00G97780',
'e_value' => '9e-78',
'bit_score' => '277',
'alignment_length' => '586',
'identity_percentage' => '33.28',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'AP00G35250' => array(
'gene_id' => 'AP00G35250',
'e_value' => '1e-77',
'bit_score' => '279',
'alignment_length' => '519',
'identity_percentage' => '34.87',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000068587' => array(
'gene_id' => 'ENSMUSG00000068587',
'e_value' => '2e-77',
'bit_score' => '282',
'alignment_length' => '935',
'identity_percentage' => '28.02',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00079G00080' => array(
'gene_id' => 'ATR_00079G00080',
'e_value' => '1e-76',
'bit_score' => '269',
'alignment_length' => '565',
'identity_percentage' => '32.57',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'AC00G02390' => array(
'gene_id' => 'AC00G02390',
'e_value' => '2e-75',
'bit_score' => '265',
'alignment_length' => '555',
'identity_percentage' => '31.17',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000027790' => array(
'gene_id' => 'ENSMUSG00000027790',
'e_value' => '8e-75',
'bit_score' => '274',
'alignment_length' => '650',
'identity_percentage' => '31.38',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000257335' => array(
'gene_id' => 'ENSG00000257335',
'e_value' => '4e-74',
'bit_score' => '273',
'alignment_length' => '846',
'identity_percentage' => '28.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000090402' => array(
'gene_id' => 'ENSG00000090402',
'e_value' => '4e-70',
'bit_score' => '260',
'alignment_length' => '836',
'identity_percentage' => '29.19',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000278563' => array(
'gene_id' => 'ENSG00000278563',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000257743' => array(
'gene_id' => 'ENSG00000257743',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'pte388210' => array(
'gene_id' => 'pte388210',
'e_value' => '3e-67',
'bit_score' => '245',
'alignment_length' => '645',
'identity_percentage' => '27.60',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte323710' => array(
'gene_id' => 'pte323710',
'e_value' => '3e-66',
'bit_score' => '243',
'alignment_length' => '655',
'identity_percentage' => '26.72',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte374950' => array(
'gene_id' => 'pte374950',
'e_value' => '2e-65',
'bit_score' => '240',
'alignment_length' => '648',
'identity_percentage' => '27.47',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_008G02740' => array(
'gene_id' => 'CNC64A_008G02740',
'e_value' => '2e-65',
'bit_score' => '244',
'alignment_length' => '634',
'identity_percentage' => '30.91',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'CV00G66180' => array(
'gene_id' => 'CV00G66180',
'e_value' => '5e-64',
'bit_score' => '237',
'alignment_length' => '743',
'identity_percentage' => '25.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CV00G87890' => array(
'gene_id' => 'CV00G87890',
'e_value' => '3e-62',
'bit_score' => '231',
'alignment_length' => '629',
'identity_percentage' => '26.55',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00017071' => array(
'gene_id' => 'WBGene00017071',
'e_value' => '5e-62',
'bit_score' => '231',
'alignment_length' => '684',
'identity_percentage' => '28.22',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'pte268290' => array(
'gene_id' => 'pte268290',
'e_value' => '2e-60',
'bit_score' => '225',
'alignment_length' => '593',
'identity_percentage' => '28.16',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte186640' => array(
'gene_id' => 'pte186640',
'e_value' => '1e-57',
'bit_score' => '217',
'alignment_length' => '598',
'identity_percentage' => '27.26',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.199g00040' => array(
'gene_id' => 'RCC4223.199g00040',
'e_value' => '3e-56',
'bit_score' => '212',
'alignment_length' => '497',
'identity_percentage' => '30.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'CV00G66200' => array(
'gene_id' => 'CV00G66200',
'e_value' => '6e-56',
'bit_score' => '209',
'alignment_length' => '659',
'identity_percentage' => '27.01',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'pte70280' => array(
'gene_id' => 'pte70280',
'e_value' => '3e-50',
'bit_score' => '194',
'alignment_length' => '678',
'identity_percentage' => '26.55',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_019G00790' => array(
'gene_id' => 'CNC64A_019G00790',
'e_value' => '2e-49',
'bit_score' => '183',
'alignment_length' => '345',
'identity_percentage' => '33.33',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'SPAC1039.11c' => array(
'gene_id' => 'SPAC1039.11c',
'e_value' => '3e-49',
'bit_score' => '193',
'alignment_length' => '298',
'identity_percentage' => '37.58',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'SPAC30D11.01c' => array(
'gene_id' => 'SPAC30D11.01c',
'e_value' => '9e-48',
'bit_score' => '188',
'alignment_length' => '352',
'identity_percentage' => '33.81',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'PP00281G00070' => array(
'gene_id' => 'PP00281G00070',
'e_value' => '3e-47',
'bit_score' => '181',
'alignment_length' => '501',
'identity_percentage' => '28.54',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'SPAPB24D3.10c' => array(
'gene_id' => 'SPAPB24D3.10c',
'e_value' => '3e-47',
'bit_score' => '187',
'alignment_length' => '360',
'identity_percentage' => '33.06',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'pte180100' => array(
'gene_id' => 'pte180100',
'e_value' => '6e-47',
'bit_score' => '185',
'alignment_length' => '734',
'identity_percentage' => '26.57',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00019895' => array(
'gene_id' => 'WBGene00019895',
'e_value' => '2e-45',
'bit_score' => '181',
'alignment_length' => '683',
'identity_percentage' => '25.92',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'phs92320' => array(
'gene_id' => 'phs92320',
'e_value' => '8e-45',
'bit_score' => '179',
'alignment_length' => '332',
'identity_percentage' => '34.34',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'gsu139510' => array(
'gene_id' => 'gsu139510',
'e_value' => '2e-42',
'bit_score' => '171',
'alignment_length' => '475',
'identity_percentage' => '27.16',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CV00G74030' => array(
'gene_id' => 'CV00G74030',
'e_value' => '2e-41',
'bit_score' => '169',
'alignment_length' => '291',
'identity_percentage' => '34.71',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G25410' => array(
'gene_id' => 'HE0000G25410',
'e_value' => '9e-41',
'bit_score' => '164',
'alignment_length' => '451',
'identity_percentage' => '27.94',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'CV00G33310' => array(
'gene_id' => 'CV00G33310',
'e_value' => '3e-39',
'bit_score' => '162',
'alignment_length' => '359',
'identity_percentage' => '30.92',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'emh746930' => array(
'gene_id' => 'emh746930',
'e_value' => '2e-38',
'bit_score' => '159',
'alignment_length' => '352',
'identity_percentage' => '32.39',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh564800' => array(
'gene_id' => 'emh564800',
'e_value' => '3e-37',
'bit_score' => '155',
'alignment_length' => '352',
'identity_percentage' => '32.10',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh552990' => array(
'gene_id' => 'emh552990',
'e_value' => '4e-37',
'bit_score' => '154',
'alignment_length' => '511',
'identity_percentage' => '27.79',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'phs71110' => array(
'gene_id' => 'phs71110',
'e_value' => '6e-33',
'bit_score' => '141',
'alignment_length' => '398',
'identity_percentage' => '29.90',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'CR03G11570' => array(
'gene_id' => 'CR03G11570',
'e_value' => '1e-32',
'bit_score' => '141',
'alignment_length' => '263',
'identity_percentage' => '33.46',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'CM06G01210' => array(
'gene_id' => 'CM06G01210',
'e_value' => '1e-27',
'bit_score' => '125',
'alignment_length' => '470',
'identity_percentage' => '26.38',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'gsu63580' => array(
'gene_id' => 'gsu63580',
'e_value' => '4e-27',
'bit_score' => '122',
'alignment_length' => '561',
'identity_percentage' => '22.82',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100114g11' => array(
'gene_id' => 'Naga_100114g11',
'e_value' => '2e-24',
'bit_score' => '114',
'alignment_length' => '434',
'identity_percentage' => '25.81',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_288G00010' => array(
'gene_id' => 'CNC64A_288G00010',
'e_value' => '7e-24',
'bit_score' => '106',
'alignment_length' => '193',
'identity_percentage' => '36.27',
'gf' => array(
[maximum depth reached]
)
),
'phs71090' => array(
'gene_id' => 'phs71090',
'e_value' => '4e-23',
'bit_score' => '107',
'alignment_length' => '260',
'identity_percentage' => '26.92',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'MP05G04870' => array(
'gene_id' => 'MP05G04870',
'e_value' => '2e-22',
'bit_score' => '107',
'alignment_length' => '398',
'identity_percentage' => '25.63',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'OT_04G02420' => array(
'gene_id' => 'OT_04G02420',
'e_value' => '1e-21',
'bit_score' => '104',
'alignment_length' => '372',
'identity_percentage' => '26.61',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'MP08G03280' => array(
'gene_id' => 'MP08G03280',
'e_value' => '7e-21',
'bit_score' => '102',
'alignment_length' => '440',
'identity_percentage' => '25.91',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_04G02780' => array(
'gene_id' => 'ORCC809_04G02780',
'e_value' => '9e-21',
'bit_score' => '100',
'alignment_length' => '408',
'identity_percentage' => '25.25',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'OT_08G03880' => array(
'gene_id' => 'OT_08G03880',
'e_value' => '2e-20',
'bit_score' => '101',
'alignment_length' => '357',
'identity_percentage' => '24.65',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OM_16G02430' => array(
'gene_id' => 'OM_16G02430',
'e_value' => '3e-20',
'bit_score' => '100',
'alignment_length' => '362',
'identity_percentage' => '25.97',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OL04G02410' => array(
'gene_id' => 'OL04G02410',
'e_value' => '6e-20',
'bit_score' => '97.4',
'alignment_length' => '405',
'identity_percentage' => '24.69',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_11G02870' => array(
'gene_id' => 'MRCC299_11G02870',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '413',
'identity_percentage' => '27.60',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'emh123040' => array(
'gene_id' => 'emh123040',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '216',
'identity_percentage' => '31.94',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh362880' => array(
'gene_id' => 'emh362880',
'e_value' => '2e-19',
'bit_score' => '98.2',
'alignment_length' => '190',
'identity_percentage' => '33.16',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'gsu137050' => array(
'gene_id' => 'gsu137050',
'e_value' => '2e-19',
'bit_score' => '97.8',
'alignment_length' => '390',
'identity_percentage' => '24.62',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'gsu133460' => array(
'gene_id' => 'gsu133460',
'e_value' => '2e-18',
'bit_score' => '91.7',
'alignment_length' => '255',
'identity_percentage' => '27.84',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'PP00041G01100' => array(
'gene_id' => 'PP00041G01100',
'e_value' => '6e-18',
'bit_score' => '93.6',
'alignment_length' => '499',
'identity_percentage' => '24.05',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_06G04670' => array(
'gene_id' => 'BPRRCC1105_06G04670',
'e_value' => '7e-18',
'bit_score' => '93.2',
'alignment_length' => '398',
'identity_percentage' => '24.87',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_08G03350' => array(
'gene_id' => 'MRCC299_08G03350',
'e_value' => '1e-17',
'bit_score' => '92.0',
'alignment_length' => '403',
'identity_percentage' => '25.56',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_12G00530' => array(
'gene_id' => 'ORCC809_12G00530',
'e_value' => '1e-17',
'bit_score' => '92.4',
'alignment_length' => '368',
'identity_percentage' => '26.36',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_034G00570' => array(
'gene_id' => 'CNC64A_034G00570',
'e_value' => '1e-17',
'bit_score' => '84.7',
'alignment_length' => '79',
'identity_percentage' => '49.37',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'OL08G03830' => array(
'gene_id' => 'OL08G03830',
'e_value' => '2e-17',
'bit_score' => '90.9',
'alignment_length' => '572',
'identity_percentage' => '22.73',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0261575' => array(
'gene_id' => 'FBgn0261575',
'e_value' => '5e-17',
'bit_score' => '90.1',
'alignment_length' => '379',
'identity_percentage' => '24.80',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_05G02990' => array(
'gene_id' => 'ORCC809_05G02990',
'e_value' => '5e-17',
'bit_score' => '90.5',
'alignment_length' => '213',
'identity_percentage' => '31.92',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'OL05G03060' => array(
'gene_id' => 'OL05G03060',
'e_value' => '6e-17',
'bit_score' => '89.4',
'alignment_length' => '387',
'identity_percentage' => '28.68',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'CV00G34570' => array(
'gene_id' => 'CV00G34570',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'OM_02G02640' => array(
'gene_id' => 'OM_02G02640',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '368',
'identity_percentage' => '25.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000046312' => array(
'gene_id' => 'ENSMUSG00000046312',
'e_value' => '8e-17',
'bit_score' => '89.4',
'alignment_length' => '398',
'identity_percentage' => '24.12',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.09g03870' => array(
'gene_id' => 'RCC4223.09g03870',
'e_value' => '4e-16',
'bit_score' => '87.4',
'alignment_length' => '198',
'identity_percentage' => '33.33',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000164976' => array(
'gene_id' => 'ENSG00000164976',
'e_value' => '5e-16',
'bit_score' => '87.0',
'alignment_length' => '395',
'identity_percentage' => '23.80',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'OM_03G03260' => array(
'gene_id' => 'OM_03G03260',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '207',
'identity_percentage' => '31.40',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_01G05990' => array(
'gene_id' => 'BPRRCC1105_01G05990',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '353',
'identity_percentage' => '23.51',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'PI00G61580' => array(
'gene_id' => 'PI00G61580',
'e_value' => '3e-15',
'bit_score' => '84.7',
'alignment_length' => '198',
'identity_percentage' => '32.83',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00095G00110' => array(
'gene_id' => 'ATR_00095G00110',
'e_value' => '5e-14',
'bit_score' => '80.5',
'alignment_length' => '461',
'identity_percentage' => '22.34',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_034G00560' => array(
'gene_id' => 'CNC64A_034G00560',
'e_value' => '5e-13',
'bit_score' => '76.6',
'alignment_length' => '343',
'identity_percentage' => '23.03',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'PP00065G00350' => array(
'gene_id' => 'PP00065G00350',
'e_value' => '1e-12',
'bit_score' => '75.1',
'alignment_length' => '311',
'identity_percentage' => '21.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'FC006G00220' => array(
'gene_id' => 'FC006G00220',
'e_value' => '1e-12',
'bit_score' => '76.3',
'alignment_length' => '314',
'identity_percentage' => '25.16',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_529G00010' => array(
'gene_id' => 'CNC64A_529G00010',
'e_value' => '2e-12',
'bit_score' => '70.5',
'alignment_length' => '89',
'identity_percentage' => '41.57',
'gf' => array(
[maximum depth reached]
)
),
'OT_05G03110' => array(
'gene_id' => 'OT_05G03110',
'e_value' => '2e-11',
'bit_score' => '72.0',
'alignment_length' => '216',
'identity_percentage' => '29.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'CM13G02020' => array(
'gene_id' => 'CM13G02020',
'e_value' => '8e-10',
'bit_score' => '67.0',
'alignment_length' => '218',
'identity_percentage' => '26.61',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0053080' => array(
'gene_id' => 'FBgn0053080',
'e_value' => '1e-09',
'bit_score' => '66.6',
'alignment_length' => '400',
'identity_percentage' => '22.50',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'emh755690' => array(
'gene_id' => 'emh755690',
'e_value' => '2e-09',
'bit_score' => '65.5',
'alignment_length' => '232',
'identity_percentage' => '26.29',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'MP02G01920' => array(
'gene_id' => 'MP02G01920',
'e_value' => '3e-09',
'bit_score' => '65.1',
'alignment_length' => '223',
'identity_percentage' => '26.46',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'pte584840' => array(
'gene_id' => 'pte584840',
'e_value' => '2e-08',
'bit_score' => '62.4',
'alignment_length' => '495',
'identity_percentage' => '18.59',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'emh344740' => array(
'gene_id' => 'emh344740',
'e_value' => '4e-08',
'bit_score' => '61.2',
'alignment_length' => '304',
'identity_percentage' => '23.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ccr117820' => array(
'gene_id' => 'ccr117820',
'e_value' => '1e-07',
'bit_score' => '59.7',
'alignment_length' => '423',
'identity_percentage' => '23.64',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'AA0007G01760' => array(
'gene_id' => 'AA0007G01760',
'e_value' => '4e-07',
'bit_score' => '58.2',
'alignment_length' => '411',
'identity_percentage' => '23.36',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
)
),
'similarity_hits_species' => array(
'ath' => array(
(int) 0 => 'AT5G63840',
(int) 1 => 'AT3G23640',
(int) 2 => 'AT5G11720',
(int) 3 => 'AT3G45940',
(int) 4 => 'AT1G68560'
),
'atr' => array(
(int) 0 => 'ATR_00065G01570',
(int) 1 => 'ATR_00048G01310',
(int) 2 => 'ATR_00092G00960',
(int) 3 => 'ATR_00079G00110',
(int) 4 => 'ATR_00079G00080',
(int) 5 => 'ATR_00095G00110'
),
'osa' => array(
(int) 0 => 'OS03G11720',
(int) 1 => 'OS06G46340',
(int) 2 => 'OS07G23944',
(int) 3 => 'OS07G23880',
(int) 4 => 'OS06G46284',
(int) 5 => 'OS01G03950'
),
'ppa' => array(
(int) 0 => 'PP00109G00830',
(int) 1 => 'PP00242G00250',
(int) 2 => 'PP00005G01250',
(int) 3 => 'PP00041G01080',
(int) 4 => 'PP00140G00390',
(int) 5 => 'PP00060G00720',
(int) 6 => 'PP00157G00350',
(int) 7 => 'PP00264G00160',
(int) 8 => 'PP00011G01860',
(int) 9 => 'PP00013G02430',
(int) 10 => 'PP00264G00120',
(int) 11 => 'PP00080G01120',
(int) 12 => 'PP00025G00520',
(int) 13 => 'PP00086G00660',
(int) 14 => 'PP00119G00640',
(int) 15 => 'PP00006G00120',
(int) 16 => 'PP00245G00510',
(int) 17 => 'PP00043G00100',
(int) 18 => 'PP00281G00070',
(int) 19 => 'PP00041G01100',
(int) 20 => 'PP00065G00350'
),
'acg' => array(
(int) 0 => 'AC00G77390',
(int) 1 => 'AC00G97780',
(int) 2 => 'AC00G02390'
),
'vca' => array(
(int) 0 => 'VC00G110660'
),
'cvu' => array(
(int) 0 => 'CV00G24690',
(int) 1 => 'CV00G66180',
(int) 2 => 'CV00G87890',
(int) 3 => 'CV00G66200',
(int) 4 => 'CV00G74030',
(int) 5 => 'CV00G33310',
(int) 6 => 'CV00G34570'
),
'pse3' => array(
(int) 0 => 'PI00G24040',
(int) 1 => 'PI00G61580'
),
'ddi' => array(
(int) 0 => 'DDB_G0269154',
(int) 1 => 'DDB_G0269790'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g01620',
(int) 1 => 'RCC4223.199g00040',
(int) 2 => 'RCC4223.09g03870'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_08G05390',
(int) 1 => 'MRCC299_11G02870',
(int) 2 => 'MRCC299_08G03350'
),
'cre' => array(
(int) 0 => 'CR03G10710',
(int) 1 => 'CR03G11570'
),
'ome' => array(
(int) 0 => 'OM_16G01380',
(int) 1 => 'OM_16G02430',
(int) 2 => 'OM_02G02640',
(int) 3 => 'OM_03G03260'
),
'ota' => array(
(int) 0 => 'OT_08G02830',
(int) 1 => 'OT_04G02420',
(int) 2 => 'OT_08G03880',
(int) 3 => 'OT_05G03110'
),
'olu' => array(
(int) 0 => 'OL08G02650',
(int) 1 => 'OL04G02410',
(int) 2 => 'OL08G03830',
(int) 3 => 'OL05G03060'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000071650',
(int) 1 => 'ENSMUSG00000062646',
(int) 2 => 'ENSMUSG00000068587',
(int) 3 => 'ENSMUSG00000027790',
(int) 4 => 'ENSMUSG00000046312'
),
'nga' => array(
(int) 0 => 'Naga_100017g38',
(int) 1 => 'Naga_100114g11'
),
'mpu' => array(
(int) 0 => 'MP05G06760',
(int) 1 => 'MP05G04870',
(int) 2 => 'MP08G03280',
(int) 3 => 'MP02G01920'
),
'fcy' => array(
(int) 0 => 'FC002G01800',
(int) 1 => 'FC006G00220'
),
'hom' => array(
(int) 0 => 'ENSG00000214013',
(int) 1 => 'ENSG00000257335',
(int) 2 => 'ENSG00000090402',
(int) 3 => 'ENSG00000278563',
(int) 4 => 'ENSG00000257743',
(int) 5 => 'ENSG00000164976'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_01G07160',
(int) 1 => 'BPRRCC1105_06G04670',
(int) 2 => 'BPRRCC1105_01G05990'
),
'ccr' => array(
(int) 0 => 'ccr158380',
(int) 1 => 'ccr117820'
),
'cel' => array(
(int) 0 => 'WBGene00009583',
(int) 1 => 'WBGene00018682',
(int) 2 => 'WBGene00017071',
(int) 3 => 'WBGene00019895'
),
'ptri' => array(
(int) 0 => 'PTI_05G01610'
),
'tps' => array(
(int) 0 => 'TP07G02080'
),
'drm' => array(
(int) 0 => 'FBgn0027588',
(int) 1 => 'FBgn0261575',
(int) 2 => 'FBgn0053080'
),
'emh' => array(
(int) 0 => 'emh160400',
(int) 1 => 'emh626580',
(int) 2 => 'emh472720',
(int) 3 => 'emh746930',
(int) 4 => 'emh564800',
(int) 5 => 'emh552990',
(int) 6 => 'emh123040',
(int) 7 => 'emh362880',
(int) 8 => 'emh755690',
(int) 9 => 'emh344740'
),
'phs' => array(
(int) 0 => 'phs303660',
(int) 1 => 'phs293220',
(int) 2 => 'phs293240',
(int) 3 => 'phs92320',
(int) 4 => 'phs71110',
(int) 5 => 'phs71090'
),
'hsp' => array(
(int) 0 => 'HE0000G07800',
(int) 1 => 'HE0000G25410'
),
'aan' => array(
(int) 0 => 'AA0001G01930',
(int) 1 => 'AA0007G01760'
),
'apr' => array(
(int) 0 => 'AP00G19080',
(int) 1 => 'AP00G35250'
),
'scp' => array(
(int) 0 => 'SPAC1002.03c',
(int) 1 => 'SPAC1039.11c',
(int) 2 => 'SPAC30D11.01c',
(int) 3 => 'SPAPB24D3.10c'
),
'gsu' => array(
(int) 0 => 'gsu126010',
(int) 1 => 'gsu139510',
(int) 2 => 'gsu63580',
(int) 3 => 'gsu137050',
(int) 4 => 'gsu133460'
),
'cme' => array(
(int) 0 => 'CM13G00820',
(int) 1 => 'CM06G01210',
(int) 2 => 'CM13G02020'
),
'sac' => array(
(int) 0 => 'YBR229C'
),
'esi' => array(
(int) 0 => 'ES0080G00420'
),
'orcc809' => array(
(int) 0 => 'ORCC809_08G02600',
(int) 1 => 'ORCC809_04G02780',
(int) 2 => 'ORCC809_12G00530',
(int) 3 => 'ORCC809_05G02990'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_025G00750',
(int) 1 => 'CNC64A_008G02740',
(int) 2 => 'CNC64A_019G00790',
(int) 3 => 'CNC64A_034G00570',
(int) 4 => 'CNC64A_034G00560'
),
'pte' => array(
(int) 0 => 'pte388210',
(int) 1 => 'pte323710',
(int) 2 => 'pte374950',
(int) 3 => 'pte268290',
(int) 4 => 'pte186640',
(int) 5 => 'pte70280',
(int) 6 => 'pte180100',
(int) 7 => 'pte584840'
)
),
'gene_id' => 'AT5G63840',
'all_species_index' => array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'all_species' => array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'gene_family_types_information' => array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
),
'gene_family_types_configuration' => array(),
'data_identifier' => 'AT5G63840',
'data_type' => 'gene_id',
'allow_async_use' => true,
'gene_placeholder' => 'ES0116G00040',
'gf_placeholder' => 'HOM03P017607',
'title_for_layout' => 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
)
$allowed_extra_sequences_types = array(
'aa' => 'Protein',
'dna' => 'DNA'
)
$allowed_editing_methods = array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
)
$allowed_tree_programs = array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
)
$similarity_hits_genes = array(
'AT5G63840' => array(
'gene_id' => 'AT5G63840',
'e_value' => '0.0',
'bit_score' => '1909',
'alignment_length' => '922',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ATR_00065G01570' => array(
'gene_id' => 'ATR_00065G01570',
'e_value' => '0.0',
'bit_score' => '1308',
'alignment_length' => '909',
'identity_percentage' => '67.88',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OS03G11720' => array(
'gene_id' => 'OS03G11720',
'e_value' => '0.0',
'bit_score' => '1258',
'alignment_length' => '920',
'identity_percentage' => '66.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PP00109G00830' => array(
'gene_id' => 'PP00109G00830',
'e_value' => '0.0',
'bit_score' => '1146',
'alignment_length' => '945',
'identity_percentage' => '59.15',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AC00G77390' => array(
'gene_id' => 'AC00G77390',
'e_value' => '0.0',
'bit_score' => '879',
'alignment_length' => '925',
'identity_percentage' => '48.54',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'VC00G110660' => array(
'gene_id' => 'VC00G110660',
'e_value' => '0.0',
'bit_score' => '865',
'alignment_length' => '939',
'identity_percentage' => '48.78',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CV00G24690' => array(
'gene_id' => 'CV00G24690',
'e_value' => '0.0',
'bit_score' => '856',
'alignment_length' => '933',
'identity_percentage' => '48.77',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PI00G24040' => array(
'gene_id' => 'PI00G24040',
'e_value' => '0.0',
'bit_score' => '852',
'alignment_length' => '938',
'identity_percentage' => '47.33',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'DDB_G0269154' => array(
'gene_id' => 'DDB_G0269154',
'e_value' => '0.0',
'bit_score' => '847',
'alignment_length' => '979',
'identity_percentage' => '45.45',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'RCC4223.04g01620' => array(
'gene_id' => 'RCC4223.04g01620',
'e_value' => '0.0',
'bit_score' => '845',
'alignment_length' => '942',
'identity_percentage' => '46.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'MRCC299_08G05390' => array(
'gene_id' => 'MRCC299_08G05390',
'e_value' => '0.0',
'bit_score' => '833',
'alignment_length' => '949',
'identity_percentage' => '46.58',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CR03G10710' => array(
'gene_id' => 'CR03G10710',
'e_value' => '0.0',
'bit_score' => '831',
'alignment_length' => '920',
'identity_percentage' => '49.13',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OM_16G01380' => array(
'gene_id' => 'OM_16G01380',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '983',
'identity_percentage' => '44.25',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OT_08G02830' => array(
'gene_id' => 'OT_08G02830',
'e_value' => '0.0',
'bit_score' => '818',
'alignment_length' => '957',
'identity_percentage' => '44.62',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OL08G02650' => array(
'gene_id' => 'OL08G02650',
'e_value' => '0.0',
'bit_score' => '806',
'alignment_length' => '845',
'identity_percentage' => '48.52',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSMUSG00000071650' => array(
'gene_id' => 'ENSMUSG00000071650',
'e_value' => '0.0',
'bit_score' => '798',
'alignment_length' => '976',
'identity_percentage' => '43.24',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'Naga_100017g38' => array(
'gene_id' => 'Naga_100017g38',
'e_value' => '0.0',
'bit_score' => '797',
'alignment_length' => '738',
'identity_percentage' => '52.03',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'MP05G06760' => array(
'gene_id' => 'MP05G06760',
'e_value' => '0.0',
'bit_score' => '796',
'alignment_length' => '1019',
'identity_percentage' => '43.47',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'FC002G01800' => array(
'gene_id' => 'FC002G01800',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '801',
'identity_percentage' => '48.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSMUSG00000062646' => array(
'gene_id' => 'ENSMUSG00000062646',
'e_value' => '0.0',
'bit_score' => '771',
'alignment_length' => '935',
'identity_percentage' => '42.14',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSG00000214013' => array(
'gene_id' => 'ENSG00000214013',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '937',
'identity_percentage' => '42.90',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'BPRRCC1105_01G07160' => array(
'gene_id' => 'BPRRCC1105_01G07160',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '941',
'identity_percentage' => '45.16',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ccr158380' => array(
'gene_id' => 'ccr158380',
'e_value' => '0.0',
'bit_score' => '751',
'alignment_length' => '763',
'identity_percentage' => '49.41',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'WBGene00009583' => array(
'gene_id' => 'WBGene00009583',
'e_value' => '0.0',
'bit_score' => '736',
'alignment_length' => '945',
'identity_percentage' => '41.16',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PTI_05G01610' => array(
'gene_id' => 'PTI_05G01610',
'e_value' => '0.0',
'bit_score' => '741',
'alignment_length' => '786',
'identity_percentage' => '47.07',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'TP07G02080' => array(
'gene_id' => 'TP07G02080',
'e_value' => '0.0',
'bit_score' => '733',
'alignment_length' => '748',
'identity_percentage' => '49.33',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'FBgn0027588' => array(
'gene_id' => 'FBgn0027588',
'e_value' => '0.0',
'bit_score' => '725',
'alignment_length' => '971',
'identity_percentage' => '39.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh160400' => array(
'gene_id' => 'emh160400',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh626580' => array(
'gene_id' => 'emh626580',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'WBGene00018682' => array(
'gene_id' => 'WBGene00018682',
'e_value' => '0.0',
'bit_score' => '722',
'alignment_length' => '880',
'identity_percentage' => '42.84',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'phs303660' => array(
'gene_id' => 'phs303660',
'e_value' => '0.0',
'bit_score' => '724',
'alignment_length' => '990',
'identity_percentage' => '42.42',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'HE0000G07800' => array(
'gene_id' => 'HE0000G07800',
'e_value' => '0.0',
'bit_score' => '685',
'alignment_length' => '791',
'identity_percentage' => '46.65',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AA0001G01930' => array(
'gene_id' => 'AA0001G01930',
'e_value' => '0.0',
'bit_score' => '701',
'alignment_length' => '668',
'identity_percentage' => '51.65',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AP00G19080' => array(
'gene_id' => 'AP00G19080',
'e_value' => '0.0',
'bit_score' => '669',
'alignment_length' => '660',
'identity_percentage' => '51.82',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'SPAC1002.03c' => array(
'gene_id' => 'SPAC1002.03c',
'e_value' => '0.0',
'bit_score' => '650',
'alignment_length' => '880',
'identity_percentage' => '39.66',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'gsu126010' => array(
'gene_id' => 'gsu126010',
'e_value' => '0.0',
'bit_score' => '637',
'alignment_length' => '922',
'identity_percentage' => '38.07',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CM13G00820' => array(
'gene_id' => 'CM13G00820',
'e_value' => '0.0',
'bit_score' => '600',
'alignment_length' => '987',
'identity_percentage' => '37.18',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'YBR229C' => array(
'gene_id' => 'YBR229C',
'e_value' => '0.0',
'bit_score' => '560',
'alignment_length' => '980',
'identity_percentage' => '34.08',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ES0080G00420' => array(
'gene_id' => 'ES0080G00420',
'e_value' => '9e-177',
'bit_score' => '530',
'alignment_length' => '572',
'identity_percentage' => '46.68',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ORCC809_08G02600' => array(
'gene_id' => 'ORCC809_08G02600',
'e_value' => '4e-152',
'bit_score' => '484',
'alignment_length' => '406',
'identity_percentage' => '57.39',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh472720' => array(
'gene_id' => 'emh472720',
'e_value' => '1e-131',
'bit_score' => '427',
'alignment_length' => '642',
'identity_percentage' => '38.63',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P209776'
)
),
'PP00242G00250' => array(
'gene_id' => 'PP00242G00250',
'e_value' => '5e-107',
'bit_score' => '361',
'alignment_length' => '496',
'identity_percentage' => '39.72',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00005G01250' => array(
'gene_id' => 'PP00005G01250',
'e_value' => '2e-102',
'bit_score' => '350',
'alignment_length' => '581',
'identity_percentage' => '36.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00041G01080' => array(
'gene_id' => 'PP00041G01080',
'e_value' => '5e-102',
'bit_score' => '349',
'alignment_length' => '496',
'identity_percentage' => '38.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00140G00390' => array(
'gene_id' => 'PP00140G00390',
'e_value' => '1e-101',
'bit_score' => '346',
'alignment_length' => '496',
'identity_percentage' => '37.90',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'AT3G23640' => array(
'gene_id' => 'AT3G23640',
'e_value' => '1e-97',
'bit_score' => '335',
'alignment_length' => '586',
'identity_percentage' => '34.98',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'OS06G46340' => array(
'gene_id' => 'OS06G46340',
'e_value' => '3e-95',
'bit_score' => '326',
'alignment_length' => '608',
'identity_percentage' => '35.20',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'DDB_G0269790' => array(
'gene_id' => 'DDB_G0269790',
'e_value' => '1e-94',
'bit_score' => '324',
'alignment_length' => '772',
'identity_percentage' => '29.79',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00060G00720' => array(
'gene_id' => 'PP00060G00720',
'e_value' => '2e-94',
'bit_score' => '326',
'alignment_length' => '522',
'identity_percentage' => '36.02',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'OS07G23944' => array(
'gene_id' => 'OS07G23944',
'e_value' => '5e-93',
'bit_score' => '322',
'alignment_length' => '615',
'identity_percentage' => '33.82',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'ATR_00048G01310' => array(
'gene_id' => 'ATR_00048G01310',
'e_value' => '6e-93',
'bit_score' => '323',
'alignment_length' => '495',
'identity_percentage' => '36.36',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00157G00350' => array(
'gene_id' => 'PP00157G00350',
'e_value' => '2e-92',
'bit_score' => '319',
'alignment_length' => '726',
'identity_percentage' => '31.82',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS07G23880' => array(
'gene_id' => 'OS07G23880',
'e_value' => '3e-92',
'bit_score' => '321',
'alignment_length' => '572',
'identity_percentage' => '35.14',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'AT5G11720' => array(
'gene_id' => 'AT5G11720',
'e_value' => '1e-90',
'bit_score' => '314',
'alignment_length' => '859',
'identity_percentage' => '29.57',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS06G46284' => array(
'gene_id' => 'OS06G46284',
'e_value' => '1e-90',
'bit_score' => '313',
'alignment_length' => '607',
'identity_percentage' => '34.27',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs293220' => array(
'gene_id' => 'phs293220',
'e_value' => '8e-90',
'bit_score' => '311',
'alignment_length' => '667',
'identity_percentage' => '31.33',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00092G00960' => array(
'gene_id' => 'ATR_00092G00960',
'e_value' => '2e-89',
'bit_score' => '310',
'alignment_length' => '657',
'identity_percentage' => '31.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs293240' => array(
'gene_id' => 'phs293240',
'e_value' => '2e-89',
'bit_score' => '314',
'alignment_length' => '682',
'identity_percentage' => '31.09',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00079G00110' => array(
'gene_id' => 'ATR_00079G00110',
'e_value' => '2e-89',
'bit_score' => '307',
'alignment_length' => '705',
'identity_percentage' => '31.91',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00264G00160' => array(
'gene_id' => 'PP00264G00160',
'e_value' => '9e-87',
'bit_score' => '303',
'alignment_length' => '736',
'identity_percentage' => '30.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00011G01860' => array(
'gene_id' => 'PP00011G01860',
'e_value' => '1e-86',
'bit_score' => '303',
'alignment_length' => '760',
'identity_percentage' => '30.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AT3G45940' => array(
'gene_id' => 'AT3G45940',
'e_value' => '1e-86',
'bit_score' => '302',
'alignment_length' => '862',
'identity_percentage' => '28.89',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00013G02430' => array(
'gene_id' => 'PP00013G02430',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '716',
'identity_percentage' => '30.31',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00264G00120' => array(
'gene_id' => 'PP00264G00120',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '746',
'identity_percentage' => '29.62',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00080G01120' => array(
'gene_id' => 'PP00080G01120',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '765',
'identity_percentage' => '30.07',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00025G00520' => array(
'gene_id' => 'PP00025G00520',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '740',
'identity_percentage' => '29.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS01G03950' => array(
'gene_id' => 'OS01G03950',
'e_value' => '1e-83',
'bit_score' => '295',
'alignment_length' => '706',
'identity_percentage' => '30.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00086G00660' => array(
'gene_id' => 'PP00086G00660',
'e_value' => '1e-83',
'bit_score' => '293',
'alignment_length' => '706',
'identity_percentage' => '30.03',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00119G00640' => array(
'gene_id' => 'PP00119G00640',
'e_value' => '2e-82',
'bit_score' => '291',
'alignment_length' => '729',
'identity_percentage' => '29.36',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AT1G68560' => array(
'gene_id' => 'AT1G68560',
'e_value' => '2e-81',
'bit_score' => '288',
'alignment_length' => '903',
'identity_percentage' => '27.13',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00006G00120' => array(
'gene_id' => 'PP00006G00120',
'e_value' => '2e-80',
'bit_score' => '285',
'alignment_length' => '723',
'identity_percentage' => '28.49',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CNC64A_025G00750' => array(
'gene_id' => 'CNC64A_025G00750',
'e_value' => '2e-80',
'bit_score' => '276',
'alignment_length' => '384',
'identity_percentage' => '44.53',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PP00245G00510' => array(
'gene_id' => 'PP00245G00510',
'e_value' => '4e-79',
'bit_score' => '281',
'alignment_length' => '747',
'identity_percentage' => '28.78',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00043G00100' => array(
'gene_id' => 'PP00043G00100',
'e_value' => '5e-78',
'bit_score' => '278',
'alignment_length' => '655',
'identity_percentage' => '30.69',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AC00G97780' => array(
'gene_id' => 'AC00G97780',
'e_value' => '9e-78',
'bit_score' => '277',
'alignment_length' => '586',
'identity_percentage' => '33.28',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AP00G35250' => array(
'gene_id' => 'AP00G35250',
'e_value' => '1e-77',
'bit_score' => '279',
'alignment_length' => '519',
'identity_percentage' => '34.87',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSMUSG00000068587' => array(
'gene_id' => 'ENSMUSG00000068587',
'e_value' => '2e-77',
'bit_score' => '282',
'alignment_length' => '935',
'identity_percentage' => '28.02',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00079G00080' => array(
'gene_id' => 'ATR_00079G00080',
'e_value' => '1e-76',
'bit_score' => '269',
'alignment_length' => '565',
'identity_percentage' => '32.57',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AC00G02390' => array(
'gene_id' => 'AC00G02390',
'e_value' => '2e-75',
'bit_score' => '265',
'alignment_length' => '555',
'identity_percentage' => '31.17',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSMUSG00000027790' => array(
'gene_id' => 'ENSMUSG00000027790',
'e_value' => '8e-75',
'bit_score' => '274',
'alignment_length' => '650',
'identity_percentage' => '31.38',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000257335' => array(
'gene_id' => 'ENSG00000257335',
'e_value' => '4e-74',
'bit_score' => '273',
'alignment_length' => '846',
'identity_percentage' => '28.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000090402' => array(
'gene_id' => 'ENSG00000090402',
'e_value' => '4e-70',
'bit_score' => '260',
'alignment_length' => '836',
'identity_percentage' => '29.19',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000278563' => array(
'gene_id' => 'ENSG00000278563',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000257743' => array(
'gene_id' => 'ENSG00000257743',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte388210' => array(
'gene_id' => 'pte388210',
'e_value' => '3e-67',
'bit_score' => '245',
'alignment_length' => '645',
'identity_percentage' => '27.60',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte323710' => array(
'gene_id' => 'pte323710',
'e_value' => '3e-66',
'bit_score' => '243',
'alignment_length' => '655',
'identity_percentage' => '26.72',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte374950' => array(
'gene_id' => 'pte374950',
'e_value' => '2e-65',
'bit_score' => '240',
'alignment_length' => '648',
'identity_percentage' => '27.47',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CNC64A_008G02740' => array(
'gene_id' => 'CNC64A_008G02740',
'e_value' => '2e-65',
'bit_score' => '244',
'alignment_length' => '634',
'identity_percentage' => '30.91',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G66180' => array(
'gene_id' => 'CV00G66180',
'e_value' => '5e-64',
'bit_score' => '237',
'alignment_length' => '743',
'identity_percentage' => '25.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G87890' => array(
'gene_id' => 'CV00G87890',
'e_value' => '3e-62',
'bit_score' => '231',
'alignment_length' => '629',
'identity_percentage' => '26.55',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'WBGene00017071' => array(
'gene_id' => 'WBGene00017071',
'e_value' => '5e-62',
'bit_score' => '231',
'alignment_length' => '684',
'identity_percentage' => '28.22',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte268290' => array(
'gene_id' => 'pte268290',
'e_value' => '2e-60',
'bit_score' => '225',
'alignment_length' => '593',
'identity_percentage' => '28.16',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte186640' => array(
'gene_id' => 'pte186640',
'e_value' => '1e-57',
'bit_score' => '217',
'alignment_length' => '598',
'identity_percentage' => '27.26',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'RCC4223.199g00040' => array(
'gene_id' => 'RCC4223.199g00040',
'e_value' => '3e-56',
'bit_score' => '212',
'alignment_length' => '497',
'identity_percentage' => '30.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'CV00G66200' => array(
'gene_id' => 'CV00G66200',
'e_value' => '6e-56',
'bit_score' => '209',
'alignment_length' => '659',
'identity_percentage' => '27.01',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte70280' => array(
'gene_id' => 'pte70280',
'e_value' => '3e-50',
'bit_score' => '194',
'alignment_length' => '678',
'identity_percentage' => '26.55',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P050433'
)
),
'CNC64A_019G00790' => array(
'gene_id' => 'CNC64A_019G00790',
'e_value' => '2e-49',
'bit_score' => '183',
'alignment_length' => '345',
'identity_percentage' => '33.33',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P080455'
)
),
'SPAC1039.11c' => array(
'gene_id' => 'SPAC1039.11c',
'e_value' => '3e-49',
'bit_score' => '193',
'alignment_length' => '298',
'identity_percentage' => '37.58',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'SPAC30D11.01c' => array(
'gene_id' => 'SPAC30D11.01c',
'e_value' => '9e-48',
'bit_score' => '188',
'alignment_length' => '352',
'identity_percentage' => '33.81',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00281G00070' => array(
'gene_id' => 'PP00281G00070',
'e_value' => '3e-47',
'bit_score' => '181',
'alignment_length' => '501',
'identity_percentage' => '28.54',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'SPAPB24D3.10c' => array(
'gene_id' => 'SPAPB24D3.10c',
'e_value' => '3e-47',
'bit_score' => '187',
'alignment_length' => '360',
'identity_percentage' => '33.06',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte180100' => array(
'gene_id' => 'pte180100',
'e_value' => '6e-47',
'bit_score' => '185',
'alignment_length' => '734',
'identity_percentage' => '26.57',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P050433'
)
),
'WBGene00019895' => array(
'gene_id' => 'WBGene00019895',
'e_value' => '2e-45',
'bit_score' => '181',
'alignment_length' => '683',
'identity_percentage' => '25.92',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs92320' => array(
'gene_id' => 'phs92320',
'e_value' => '8e-45',
'bit_score' => '179',
'alignment_length' => '332',
'identity_percentage' => '34.34',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P174336'
)
),
'gsu139510' => array(
'gene_id' => 'gsu139510',
'e_value' => '2e-42',
'bit_score' => '171',
'alignment_length' => '475',
'identity_percentage' => '27.16',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'CV00G74030' => array(
'gene_id' => 'CV00G74030',
'e_value' => '2e-41',
'bit_score' => '169',
'alignment_length' => '291',
'identity_percentage' => '34.71',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'HE0000G25410' => array(
'gene_id' => 'HE0000G25410',
'e_value' => '9e-41',
'bit_score' => '164',
'alignment_length' => '451',
'identity_percentage' => '27.94',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G33310' => array(
'gene_id' => 'CV00G33310',
'e_value' => '3e-39',
'bit_score' => '162',
'alignment_length' => '359',
'identity_percentage' => '30.92',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'emh746930' => array(
'gene_id' => 'emh746930',
'e_value' => '2e-38',
'bit_score' => '159',
'alignment_length' => '352',
'identity_percentage' => '32.39',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'emh564800' => array(
'gene_id' => 'emh564800',
'e_value' => '3e-37',
'bit_score' => '155',
'alignment_length' => '352',
'identity_percentage' => '32.10',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'emh552990' => array(
'gene_id' => 'emh552990',
'e_value' => '4e-37',
'bit_score' => '154',
'alignment_length' => '511',
'identity_percentage' => '27.79',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P201802'
)
),
'phs71110' => array(
'gene_id' => 'phs71110',
'e_value' => '6e-33',
'bit_score' => '141',
'alignment_length' => '398',
'identity_percentage' => '29.90',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P051673'
)
),
'CR03G11570' => array(
'gene_id' => 'CR03G11570',
'e_value' => '1e-32',
'bit_score' => '141',
'alignment_length' => '263',
'identity_percentage' => '33.46',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CM06G01210' => array(
'gene_id' => 'CM06G01210',
'e_value' => '1e-27',
'bit_score' => '125',
'alignment_length' => '470',
'identity_percentage' => '26.38',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'gsu63580' => array(
'gene_id' => 'gsu63580',
'e_value' => '4e-27',
'bit_score' => '122',
'alignment_length' => '561',
'identity_percentage' => '22.82',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'Naga_100114g11' => array(
'gene_id' => 'Naga_100114g11',
'e_value' => '2e-24',
'bit_score' => '114',
'alignment_length' => '434',
'identity_percentage' => '25.81',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_288G00010' => array(
'gene_id' => 'CNC64A_288G00010',
'e_value' => '7e-24',
'bit_score' => '106',
'alignment_length' => '193',
'identity_percentage' => '36.27',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P079153'
)
),
'phs71090' => array(
'gene_id' => 'phs71090',
'e_value' => '4e-23',
'bit_score' => '107',
'alignment_length' => '260',
'identity_percentage' => '26.92',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P104467'
)
),
'MP05G04870' => array(
'gene_id' => 'MP05G04870',
'e_value' => '2e-22',
'bit_score' => '107',
'alignment_length' => '398',
'identity_percentage' => '25.63',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OT_04G02420' => array(
'gene_id' => 'OT_04G02420',
'e_value' => '1e-21',
'bit_score' => '104',
'alignment_length' => '372',
'identity_percentage' => '26.61',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MP08G03280' => array(
'gene_id' => 'MP08G03280',
'e_value' => '7e-21',
'bit_score' => '102',
'alignment_length' => '440',
'identity_percentage' => '25.91',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ORCC809_04G02780' => array(
'gene_id' => 'ORCC809_04G02780',
'e_value' => '9e-21',
'bit_score' => '100',
'alignment_length' => '408',
'identity_percentage' => '25.25',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OT_08G03880' => array(
'gene_id' => 'OT_08G03880',
'e_value' => '2e-20',
'bit_score' => '101',
'alignment_length' => '357',
'identity_percentage' => '24.65',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OM_16G02430' => array(
'gene_id' => 'OM_16G02430',
'e_value' => '3e-20',
'bit_score' => '100',
'alignment_length' => '362',
'identity_percentage' => '25.97',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OL04G02410' => array(
'gene_id' => 'OL04G02410',
'e_value' => '6e-20',
'bit_score' => '97.4',
'alignment_length' => '405',
'identity_percentage' => '24.69',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MRCC299_11G02870' => array(
'gene_id' => 'MRCC299_11G02870',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '413',
'identity_percentage' => '27.60',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'emh123040' => array(
'gene_id' => 'emh123040',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '216',
'identity_percentage' => '31.94',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P048023'
)
),
'emh362880' => array(
'gene_id' => 'emh362880',
'e_value' => '2e-19',
'bit_score' => '98.2',
'alignment_length' => '190',
'identity_percentage' => '33.16',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P048023'
)
),
'gsu137050' => array(
'gene_id' => 'gsu137050',
'e_value' => '2e-19',
'bit_score' => '97.8',
'alignment_length' => '390',
'identity_percentage' => '24.62',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'gsu133460' => array(
'gene_id' => 'gsu133460',
'e_value' => '2e-18',
'bit_score' => '91.7',
'alignment_length' => '255',
'identity_percentage' => '27.84',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'PP00041G01100' => array(
'gene_id' => 'PP00041G01100',
'e_value' => '6e-18',
'bit_score' => '93.6',
'alignment_length' => '499',
'identity_percentage' => '24.05',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'BPRRCC1105_06G04670' => array(
'gene_id' => 'BPRRCC1105_06G04670',
'e_value' => '7e-18',
'bit_score' => '93.2',
'alignment_length' => '398',
'identity_percentage' => '24.87',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MRCC299_08G03350' => array(
'gene_id' => 'MRCC299_08G03350',
'e_value' => '1e-17',
'bit_score' => '92.0',
'alignment_length' => '403',
'identity_percentage' => '25.56',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'ORCC809_12G00530' => array(
'gene_id' => 'ORCC809_12G00530',
'e_value' => '1e-17',
'bit_score' => '92.4',
'alignment_length' => '368',
'identity_percentage' => '26.36',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_034G00570' => array(
'gene_id' => 'CNC64A_034G00570',
'e_value' => '1e-17',
'bit_score' => '84.7',
'alignment_length' => '79',
'identity_percentage' => '49.37',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P113797'
)
),
'OL08G03830' => array(
'gene_id' => 'OL08G03830',
'e_value' => '2e-17',
'bit_score' => '90.9',
'alignment_length' => '572',
'identity_percentage' => '22.73',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'FBgn0261575' => array(
'gene_id' => 'FBgn0261575',
'e_value' => '5e-17',
'bit_score' => '90.1',
'alignment_length' => '379',
'identity_percentage' => '24.80',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ORCC809_05G02990' => array(
'gene_id' => 'ORCC809_05G02990',
'e_value' => '5e-17',
'bit_score' => '90.5',
'alignment_length' => '213',
'identity_percentage' => '31.92',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OL05G03060' => array(
'gene_id' => 'OL05G03060',
'e_value' => '6e-17',
'bit_score' => '89.4',
'alignment_length' => '387',
'identity_percentage' => '28.68',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'CV00G34570' => array(
'gene_id' => 'CV00G34570',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OM_02G02640' => array(
'gene_id' => 'OM_02G02640',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '368',
'identity_percentage' => '25.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ENSMUSG00000046312' => array(
'gene_id' => 'ENSMUSG00000046312',
'e_value' => '8e-17',
'bit_score' => '89.4',
'alignment_length' => '398',
'identity_percentage' => '24.12',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'RCC4223.09g03870' => array(
'gene_id' => 'RCC4223.09g03870',
'e_value' => '4e-16',
'bit_score' => '87.4',
'alignment_length' => '198',
'identity_percentage' => '33.33',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ENSG00000164976' => array(
'gene_id' => 'ENSG00000164976',
'e_value' => '5e-16',
'bit_score' => '87.0',
'alignment_length' => '395',
'identity_percentage' => '23.80',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OM_03G03260' => array(
'gene_id' => 'OM_03G03260',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '207',
'identity_percentage' => '31.40',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'BPRRCC1105_01G05990' => array(
'gene_id' => 'BPRRCC1105_01G05990',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '353',
'identity_percentage' => '23.51',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'PI00G61580' => array(
'gene_id' => 'PI00G61580',
'e_value' => '3e-15',
'bit_score' => '84.7',
'alignment_length' => '198',
'identity_percentage' => '32.83',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ATR_00095G00110' => array(
'gene_id' => 'ATR_00095G00110',
'e_value' => '5e-14',
'bit_score' => '80.5',
'alignment_length' => '461',
'identity_percentage' => '22.34',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_034G00560' => array(
'gene_id' => 'CNC64A_034G00560',
'e_value' => '5e-13',
'bit_score' => '76.6',
'alignment_length' => '343',
'identity_percentage' => '23.03',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P158659'
)
),
'PP00065G00350' => array(
'gene_id' => 'PP00065G00350',
'e_value' => '1e-12',
'bit_score' => '75.1',
'alignment_length' => '311',
'identity_percentage' => '21.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P159804'
)
),
'FC006G00220' => array(
'gene_id' => 'FC006G00220',
'e_value' => '1e-12',
'bit_score' => '76.3',
'alignment_length' => '314',
'identity_percentage' => '25.16',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'CNC64A_529G00010' => array(
'gene_id' => 'CNC64A_529G00010',
'e_value' => '2e-12',
'bit_score' => '70.5',
'alignment_length' => '89',
'identity_percentage' => '41.57',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P106179'
)
),
'OT_05G03110' => array(
'gene_id' => 'OT_05G03110',
'e_value' => '2e-11',
'bit_score' => '72.0',
'alignment_length' => '216',
'identity_percentage' => '29.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'CM13G02020' => array(
'gene_id' => 'CM13G02020',
'e_value' => '8e-10',
'bit_score' => '67.0',
'alignment_length' => '218',
'identity_percentage' => '26.61',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P093918'
)
),
'FBgn0053080' => array(
'gene_id' => 'FBgn0053080',
'e_value' => '1e-09',
'bit_score' => '66.6',
'alignment_length' => '400',
'identity_percentage' => '22.50',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P200983'
)
),
'emh755690' => array(
'gene_id' => 'emh755690',
'e_value' => '2e-09',
'bit_score' => '65.5',
'alignment_length' => '232',
'identity_percentage' => '26.29',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P144442'
)
),
'MP02G01920' => array(
'gene_id' => 'MP02G01920',
'e_value' => '3e-09',
'bit_score' => '65.1',
'alignment_length' => '223',
'identity_percentage' => '26.46',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'pte584840' => array(
'gene_id' => 'pte584840',
'e_value' => '2e-08',
'bit_score' => '62.4',
'alignment_length' => '495',
'identity_percentage' => '18.59',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P110780'
)
),
'emh344740' => array(
'gene_id' => 'emh344740',
'e_value' => '4e-08',
'bit_score' => '61.2',
'alignment_length' => '304',
'identity_percentage' => '23.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'ccr117820' => array(
'gene_id' => 'ccr117820',
'e_value' => '1e-07',
'bit_score' => '59.7',
'alignment_length' => '423',
'identity_percentage' => '23.64',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'AA0007G01760' => array(
'gene_id' => 'AA0007G01760',
'e_value' => '4e-07',
'bit_score' => '58.2',
'alignment_length' => '411',
'identity_percentage' => '23.36',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
)
)
$similarity_hits_species = array(
'ath' => array(
(int) 0 => 'AT5G63840',
(int) 1 => 'AT3G23640',
(int) 2 => 'AT5G11720',
(int) 3 => 'AT3G45940',
(int) 4 => 'AT1G68560'
),
'atr' => array(
(int) 0 => 'ATR_00065G01570',
(int) 1 => 'ATR_00048G01310',
(int) 2 => 'ATR_00092G00960',
(int) 3 => 'ATR_00079G00110',
(int) 4 => 'ATR_00079G00080',
(int) 5 => 'ATR_00095G00110'
),
'osa' => array(
(int) 0 => 'OS03G11720',
(int) 1 => 'OS06G46340',
(int) 2 => 'OS07G23944',
(int) 3 => 'OS07G23880',
(int) 4 => 'OS06G46284',
(int) 5 => 'OS01G03950'
),
'ppa' => array(
(int) 0 => 'PP00109G00830',
(int) 1 => 'PP00242G00250',
(int) 2 => 'PP00005G01250',
(int) 3 => 'PP00041G01080',
(int) 4 => 'PP00140G00390',
(int) 5 => 'PP00060G00720',
(int) 6 => 'PP00157G00350',
(int) 7 => 'PP00264G00160',
(int) 8 => 'PP00011G01860',
(int) 9 => 'PP00013G02430',
(int) 10 => 'PP00264G00120',
(int) 11 => 'PP00080G01120',
(int) 12 => 'PP00025G00520',
(int) 13 => 'PP00086G00660',
(int) 14 => 'PP00119G00640',
(int) 15 => 'PP00006G00120',
(int) 16 => 'PP00245G00510',
(int) 17 => 'PP00043G00100',
(int) 18 => 'PP00281G00070',
(int) 19 => 'PP00041G01100',
(int) 20 => 'PP00065G00350'
),
'acg' => array(
(int) 0 => 'AC00G77390',
(int) 1 => 'AC00G97780',
(int) 2 => 'AC00G02390'
),
'vca' => array(
(int) 0 => 'VC00G110660'
),
'cvu' => array(
(int) 0 => 'CV00G24690',
(int) 1 => 'CV00G66180',
(int) 2 => 'CV00G87890',
(int) 3 => 'CV00G66200',
(int) 4 => 'CV00G74030',
(int) 5 => 'CV00G33310',
(int) 6 => 'CV00G34570'
),
'pse3' => array(
(int) 0 => 'PI00G24040',
(int) 1 => 'PI00G61580'
),
'ddi' => array(
(int) 0 => 'DDB_G0269154',
(int) 1 => 'DDB_G0269790'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g01620',
(int) 1 => 'RCC4223.199g00040',
(int) 2 => 'RCC4223.09g03870'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_08G05390',
(int) 1 => 'MRCC299_11G02870',
(int) 2 => 'MRCC299_08G03350'
),
'cre' => array(
(int) 0 => 'CR03G10710',
(int) 1 => 'CR03G11570'
),
'ome' => array(
(int) 0 => 'OM_16G01380',
(int) 1 => 'OM_16G02430',
(int) 2 => 'OM_02G02640',
(int) 3 => 'OM_03G03260'
),
'ota' => array(
(int) 0 => 'OT_08G02830',
(int) 1 => 'OT_04G02420',
(int) 2 => 'OT_08G03880',
(int) 3 => 'OT_05G03110'
),
'olu' => array(
(int) 0 => 'OL08G02650',
(int) 1 => 'OL04G02410',
(int) 2 => 'OL08G03830',
(int) 3 => 'OL05G03060'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000071650',
(int) 1 => 'ENSMUSG00000062646',
(int) 2 => 'ENSMUSG00000068587',
(int) 3 => 'ENSMUSG00000027790',
(int) 4 => 'ENSMUSG00000046312'
),
'nga' => array(
(int) 0 => 'Naga_100017g38',
(int) 1 => 'Naga_100114g11'
),
'mpu' => array(
(int) 0 => 'MP05G06760',
(int) 1 => 'MP05G04870',
(int) 2 => 'MP08G03280',
(int) 3 => 'MP02G01920'
),
'fcy' => array(
(int) 0 => 'FC002G01800',
(int) 1 => 'FC006G00220'
),
'hom' => array(
(int) 0 => 'ENSG00000214013',
(int) 1 => 'ENSG00000257335',
(int) 2 => 'ENSG00000090402',
(int) 3 => 'ENSG00000278563',
(int) 4 => 'ENSG00000257743',
(int) 5 => 'ENSG00000164976'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_01G07160',
(int) 1 => 'BPRRCC1105_06G04670',
(int) 2 => 'BPRRCC1105_01G05990'
),
'ccr' => array(
(int) 0 => 'ccr158380',
(int) 1 => 'ccr117820'
),
'cel' => array(
(int) 0 => 'WBGene00009583',
(int) 1 => 'WBGene00018682',
(int) 2 => 'WBGene00017071',
(int) 3 => 'WBGene00019895'
),
'ptri' => array(
(int) 0 => 'PTI_05G01610'
),
'tps' => array(
(int) 0 => 'TP07G02080'
),
'drm' => array(
(int) 0 => 'FBgn0027588',
(int) 1 => 'FBgn0261575',
(int) 2 => 'FBgn0053080'
),
'emh' => array(
(int) 0 => 'emh160400',
(int) 1 => 'emh626580',
(int) 2 => 'emh472720',
(int) 3 => 'emh746930',
(int) 4 => 'emh564800',
(int) 5 => 'emh552990',
(int) 6 => 'emh123040',
(int) 7 => 'emh362880',
(int) 8 => 'emh755690',
(int) 9 => 'emh344740'
),
'phs' => array(
(int) 0 => 'phs303660',
(int) 1 => 'phs293220',
(int) 2 => 'phs293240',
(int) 3 => 'phs92320',
(int) 4 => 'phs71110',
(int) 5 => 'phs71090'
),
'hsp' => array(
(int) 0 => 'HE0000G07800',
(int) 1 => 'HE0000G25410'
),
'aan' => array(
(int) 0 => 'AA0001G01930',
(int) 1 => 'AA0007G01760'
),
'apr' => array(
(int) 0 => 'AP00G19080',
(int) 1 => 'AP00G35250'
),
'scp' => array(
(int) 0 => 'SPAC1002.03c',
(int) 1 => 'SPAC1039.11c',
(int) 2 => 'SPAC30D11.01c',
(int) 3 => 'SPAPB24D3.10c'
),
'gsu' => array(
(int) 0 => 'gsu126010',
(int) 1 => 'gsu139510',
(int) 2 => 'gsu63580',
(int) 3 => 'gsu137050',
(int) 4 => 'gsu133460'
),
'cme' => array(
(int) 0 => 'CM13G00820',
(int) 1 => 'CM06G01210',
(int) 2 => 'CM13G02020'
),
'sac' => array(
(int) 0 => 'YBR229C'
),
'esi' => array(
(int) 0 => 'ES0080G00420'
),
'orcc809' => array(
(int) 0 => 'ORCC809_08G02600',
(int) 1 => 'ORCC809_04G02780',
(int) 2 => 'ORCC809_12G00530',
(int) 3 => 'ORCC809_05G02990'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_025G00750',
(int) 1 => 'CNC64A_008G02740',
(int) 2 => 'CNC64A_019G00790',
(int) 3 => 'CNC64A_034G00570',
(int) 4 => 'CNC64A_034G00560'
),
'pte' => array(
(int) 0 => 'pte388210',
(int) 1 => 'pte323710',
(int) 2 => 'pte374950',
(int) 3 => 'pte268290',
(int) 4 => 'pte186640',
(int) 5 => 'pte70280',
(int) 6 => 'pte180100',
(int) 7 => 'pte584840'
)
)
$gene_id = 'AT5G63840'
$all_species_index = array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$all_species = array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$gene_family_types_information = array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
)
$gene_family_types_configuration = array()
$data_identifier = 'AT5G63840'
$data_type = 'gene_id'
$allow_async_use = true
$gene_placeholder = 'ES0116G00040'
$gf_placeholder = 'HOM03P017607'
$title_for_layout = 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
$collapse1 = ''
$collapse2 = 'collapse in'
$similarity_hit = array(
'gene_id' => 'CNC64A_288G00010',
'e_value' => '7e-24',
'bit_score' => '106',
'alignment_length' => '193',
'identity_percentage' => '36.27',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P079153'
)
)
$checked = null
$similarity_hit_gene = 'CNC64A_288G00010'
include - APP/View/Analysis/custom_tree_creation.ctp, line 169
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::render() - CORE/Cake/View/View.php, line 473
Controller::render() - CORE/Cake/Controller/Controller.php, line 963
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167
[main] - APP/webroot/index.php, line 146
|
7e-24 |
106 |
193 |
36.27 |
|
CNC64A_529G00010 |
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]Code Context echo "<td><input type='checkbox' name='selected_genes[]' value='".$similarity_hit['gene_id']."' ".$checked." /></td>\n";
echo "<td>".$this->Html->link($similarity_hit_gene,array("controller"=>"genes","action"=>"view",$similarity_hit_gene),array("target"=>"_blank"))."</td>\n";
echo "<td>".$this->Html->link($similarity_hit['common_name'],array("controller"=>"organism","action"=>"view",urlencode($similarity_hit['common_name'])))."</td>\n";
$viewFile = '/xtras/group/biocomp/plaza/versions/plaza_pico_03/app/View/Analysis/custom_tree_creation.ctp'
$dataForView = array(
'allowed_extra_sequences_types' => array(
'aa' => 'Protein',
'dna' => 'DNA'
),
'allowed_editing_methods' => array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
),
'allowed_tree_programs' => array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
),
'allowed_msa_programs' => array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
),
'allowed_number_blasthits' => array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
),
'similarity_hits_genes' => array(
'AT5G63840' => array(
'gene_id' => 'AT5G63840',
'e_value' => '0.0',
'bit_score' => '1909',
'alignment_length' => '922',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00065G01570' => array(
'gene_id' => 'ATR_00065G01570',
'e_value' => '0.0',
'bit_score' => '1308',
'alignment_length' => '909',
'identity_percentage' => '67.88',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'OS03G11720' => array(
'gene_id' => 'OS03G11720',
'e_value' => '0.0',
'bit_score' => '1258',
'alignment_length' => '920',
'identity_percentage' => '66.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00109G00830' => array(
'gene_id' => 'PP00109G00830',
'e_value' => '0.0',
'bit_score' => '1146',
'alignment_length' => '945',
'identity_percentage' => '59.15',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AC00G77390' => array(
'gene_id' => 'AC00G77390',
'e_value' => '0.0',
'bit_score' => '879',
'alignment_length' => '925',
'identity_percentage' => '48.54',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'VC00G110660' => array(
'gene_id' => 'VC00G110660',
'e_value' => '0.0',
'bit_score' => '865',
'alignment_length' => '939',
'identity_percentage' => '48.78',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CV00G24690' => array(
'gene_id' => 'CV00G24690',
'e_value' => '0.0',
'bit_score' => '856',
'alignment_length' => '933',
'identity_percentage' => '48.77',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'PI00G24040' => array(
'gene_id' => 'PI00G24040',
'e_value' => '0.0',
'bit_score' => '852',
'alignment_length' => '938',
'identity_percentage' => '47.33',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0269154' => array(
'gene_id' => 'DDB_G0269154',
'e_value' => '0.0',
'bit_score' => '847',
'alignment_length' => '979',
'identity_percentage' => '45.45',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.04g01620' => array(
'gene_id' => 'RCC4223.04g01620',
'e_value' => '0.0',
'bit_score' => '845',
'alignment_length' => '942',
'identity_percentage' => '46.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_08G05390' => array(
'gene_id' => 'MRCC299_08G05390',
'e_value' => '0.0',
'bit_score' => '833',
'alignment_length' => '949',
'identity_percentage' => '46.58',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'CR03G10710' => array(
'gene_id' => 'CR03G10710',
'e_value' => '0.0',
'bit_score' => '831',
'alignment_length' => '920',
'identity_percentage' => '49.13',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OM_16G01380' => array(
'gene_id' => 'OM_16G01380',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '983',
'identity_percentage' => '44.25',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OT_08G02830' => array(
'gene_id' => 'OT_08G02830',
'e_value' => '0.0',
'bit_score' => '818',
'alignment_length' => '957',
'identity_percentage' => '44.62',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OL08G02650' => array(
'gene_id' => 'OL08G02650',
'e_value' => '0.0',
'bit_score' => '806',
'alignment_length' => '845',
'identity_percentage' => '48.52',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000071650' => array(
'gene_id' => 'ENSMUSG00000071650',
'e_value' => '0.0',
'bit_score' => '798',
'alignment_length' => '976',
'identity_percentage' => '43.24',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100017g38' => array(
'gene_id' => 'Naga_100017g38',
'e_value' => '0.0',
'bit_score' => '797',
'alignment_length' => '738',
'identity_percentage' => '52.03',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'MP05G06760' => array(
'gene_id' => 'MP05G06760',
'e_value' => '0.0',
'bit_score' => '796',
'alignment_length' => '1019',
'identity_percentage' => '43.47',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'FC002G01800' => array(
'gene_id' => 'FC002G01800',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '801',
'identity_percentage' => '48.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000062646' => array(
'gene_id' => 'ENSMUSG00000062646',
'e_value' => '0.0',
'bit_score' => '771',
'alignment_length' => '935',
'identity_percentage' => '42.14',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000214013' => array(
'gene_id' => 'ENSG00000214013',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '937',
'identity_percentage' => '42.90',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_01G07160' => array(
'gene_id' => 'BPRRCC1105_01G07160',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '941',
'identity_percentage' => '45.16',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'ccr158380' => array(
'gene_id' => 'ccr158380',
'e_value' => '0.0',
'bit_score' => '751',
'alignment_length' => '763',
'identity_percentage' => '49.41',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00009583' => array(
'gene_id' => 'WBGene00009583',
'e_value' => '0.0',
'bit_score' => '736',
'alignment_length' => '945',
'identity_percentage' => '41.16',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'PTI_05G01610' => array(
'gene_id' => 'PTI_05G01610',
'e_value' => '0.0',
'bit_score' => '741',
'alignment_length' => '786',
'identity_percentage' => '47.07',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'TP07G02080' => array(
'gene_id' => 'TP07G02080',
'e_value' => '0.0',
'bit_score' => '733',
'alignment_length' => '748',
'identity_percentage' => '49.33',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0027588' => array(
'gene_id' => 'FBgn0027588',
'e_value' => '0.0',
'bit_score' => '725',
'alignment_length' => '971',
'identity_percentage' => '39.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'emh160400' => array(
'gene_id' => 'emh160400',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh626580' => array(
'gene_id' => 'emh626580',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00018682' => array(
'gene_id' => 'WBGene00018682',
'e_value' => '0.0',
'bit_score' => '722',
'alignment_length' => '880',
'identity_percentage' => '42.84',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'phs303660' => array(
'gene_id' => 'phs303660',
'e_value' => '0.0',
'bit_score' => '724',
'alignment_length' => '990',
'identity_percentage' => '42.42',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G07800' => array(
'gene_id' => 'HE0000G07800',
'e_value' => '0.0',
'bit_score' => '685',
'alignment_length' => '791',
'identity_percentage' => '46.65',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'AA0001G01930' => array(
'gene_id' => 'AA0001G01930',
'e_value' => '0.0',
'bit_score' => '701',
'alignment_length' => '668',
'identity_percentage' => '51.65',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'AP00G19080' => array(
'gene_id' => 'AP00G19080',
'e_value' => '0.0',
'bit_score' => '669',
'alignment_length' => '660',
'identity_percentage' => '51.82',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'SPAC1002.03c' => array(
'gene_id' => 'SPAC1002.03c',
'e_value' => '0.0',
'bit_score' => '650',
'alignment_length' => '880',
'identity_percentage' => '39.66',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'gsu126010' => array(
'gene_id' => 'gsu126010',
'e_value' => '0.0',
'bit_score' => '637',
'alignment_length' => '922',
'identity_percentage' => '38.07',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CM13G00820' => array(
'gene_id' => 'CM13G00820',
'e_value' => '0.0',
'bit_score' => '600',
'alignment_length' => '987',
'identity_percentage' => '37.18',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'YBR229C' => array(
'gene_id' => 'YBR229C',
'e_value' => '0.0',
'bit_score' => '560',
'alignment_length' => '980',
'identity_percentage' => '34.08',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
[maximum depth reached]
)
),
'ES0080G00420' => array(
'gene_id' => 'ES0080G00420',
'e_value' => '9e-177',
'bit_score' => '530',
'alignment_length' => '572',
'identity_percentage' => '46.68',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_08G02600' => array(
'gene_id' => 'ORCC809_08G02600',
'e_value' => '4e-152',
'bit_score' => '484',
'alignment_length' => '406',
'identity_percentage' => '57.39',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'emh472720' => array(
'gene_id' => 'emh472720',
'e_value' => '1e-131',
'bit_score' => '427',
'alignment_length' => '642',
'identity_percentage' => '38.63',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'PP00242G00250' => array(
'gene_id' => 'PP00242G00250',
'e_value' => '5e-107',
'bit_score' => '361',
'alignment_length' => '496',
'identity_percentage' => '39.72',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00005G01250' => array(
'gene_id' => 'PP00005G01250',
'e_value' => '2e-102',
'bit_score' => '350',
'alignment_length' => '581',
'identity_percentage' => '36.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00041G01080' => array(
'gene_id' => 'PP00041G01080',
'e_value' => '5e-102',
'bit_score' => '349',
'alignment_length' => '496',
'identity_percentage' => '38.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00140G00390' => array(
'gene_id' => 'PP00140G00390',
'e_value' => '1e-101',
'bit_score' => '346',
'alignment_length' => '496',
'identity_percentage' => '37.90',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT3G23640' => array(
'gene_id' => 'AT3G23640',
'e_value' => '1e-97',
'bit_score' => '335',
'alignment_length' => '586',
'identity_percentage' => '34.98',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'OS06G46340' => array(
'gene_id' => 'OS06G46340',
'e_value' => '3e-95',
'bit_score' => '326',
'alignment_length' => '608',
'identity_percentage' => '35.20',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0269790' => array(
'gene_id' => 'DDB_G0269790',
'e_value' => '1e-94',
'bit_score' => '324',
'alignment_length' => '772',
'identity_percentage' => '29.79',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'PP00060G00720' => array(
'gene_id' => 'PP00060G00720',
'e_value' => '2e-94',
'bit_score' => '326',
'alignment_length' => '522',
'identity_percentage' => '36.02',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS07G23944' => array(
'gene_id' => 'OS07G23944',
'e_value' => '5e-93',
'bit_score' => '322',
'alignment_length' => '615',
'identity_percentage' => '33.82',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00048G01310' => array(
'gene_id' => 'ATR_00048G01310',
'e_value' => '6e-93',
'bit_score' => '323',
'alignment_length' => '495',
'identity_percentage' => '36.36',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'PP00157G00350' => array(
'gene_id' => 'PP00157G00350',
'e_value' => '2e-92',
'bit_score' => '319',
'alignment_length' => '726',
'identity_percentage' => '31.82',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS07G23880' => array(
'gene_id' => 'OS07G23880',
'e_value' => '3e-92',
'bit_score' => '321',
'alignment_length' => '572',
'identity_percentage' => '35.14',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'AT5G11720' => array(
'gene_id' => 'AT5G11720',
'e_value' => '1e-90',
'bit_score' => '314',
'alignment_length' => '859',
'identity_percentage' => '29.57',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'OS06G46284' => array(
'gene_id' => 'OS06G46284',
'e_value' => '1e-90',
'bit_score' => '313',
'alignment_length' => '607',
'identity_percentage' => '34.27',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'phs293220' => array(
'gene_id' => 'phs293220',
'e_value' => '8e-90',
'bit_score' => '311',
'alignment_length' => '667',
'identity_percentage' => '31.33',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00092G00960' => array(
'gene_id' => 'ATR_00092G00960',
'e_value' => '2e-89',
'bit_score' => '310',
'alignment_length' => '657',
'identity_percentage' => '31.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'phs293240' => array(
'gene_id' => 'phs293240',
'e_value' => '2e-89',
'bit_score' => '314',
'alignment_length' => '682',
'identity_percentage' => '31.09',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00079G00110' => array(
'gene_id' => 'ATR_00079G00110',
'e_value' => '2e-89',
'bit_score' => '307',
'alignment_length' => '705',
'identity_percentage' => '31.91',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'PP00264G00160' => array(
'gene_id' => 'PP00264G00160',
'e_value' => '9e-87',
'bit_score' => '303',
'alignment_length' => '736',
'identity_percentage' => '30.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00011G01860' => array(
'gene_id' => 'PP00011G01860',
'e_value' => '1e-86',
'bit_score' => '303',
'alignment_length' => '760',
'identity_percentage' => '30.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT3G45940' => array(
'gene_id' => 'AT3G45940',
'e_value' => '1e-86',
'bit_score' => '302',
'alignment_length' => '862',
'identity_percentage' => '28.89',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'PP00013G02430' => array(
'gene_id' => 'PP00013G02430',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '716',
'identity_percentage' => '30.31',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00264G00120' => array(
'gene_id' => 'PP00264G00120',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '746',
'identity_percentage' => '29.62',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00080G01120' => array(
'gene_id' => 'PP00080G01120',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '765',
'identity_percentage' => '30.07',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00025G00520' => array(
'gene_id' => 'PP00025G00520',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '740',
'identity_percentage' => '29.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS01G03950' => array(
'gene_id' => 'OS01G03950',
'e_value' => '1e-83',
'bit_score' => '295',
'alignment_length' => '706',
'identity_percentage' => '30.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00086G00660' => array(
'gene_id' => 'PP00086G00660',
'e_value' => '1e-83',
'bit_score' => '293',
'alignment_length' => '706',
'identity_percentage' => '30.03',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00119G00640' => array(
'gene_id' => 'PP00119G00640',
'e_value' => '2e-82',
'bit_score' => '291',
'alignment_length' => '729',
'identity_percentage' => '29.36',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT1G68560' => array(
'gene_id' => 'AT1G68560',
'e_value' => '2e-81',
'bit_score' => '288',
'alignment_length' => '903',
'identity_percentage' => '27.13',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'PP00006G00120' => array(
'gene_id' => 'PP00006G00120',
'e_value' => '2e-80',
'bit_score' => '285',
'alignment_length' => '723',
'identity_percentage' => '28.49',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_025G00750' => array(
'gene_id' => 'CNC64A_025G00750',
'e_value' => '2e-80',
'bit_score' => '276',
'alignment_length' => '384',
'identity_percentage' => '44.53',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'PP00245G00510' => array(
'gene_id' => 'PP00245G00510',
'e_value' => '4e-79',
'bit_score' => '281',
'alignment_length' => '747',
'identity_percentage' => '28.78',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00043G00100' => array(
'gene_id' => 'PP00043G00100',
'e_value' => '5e-78',
'bit_score' => '278',
'alignment_length' => '655',
'identity_percentage' => '30.69',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AC00G97780' => array(
'gene_id' => 'AC00G97780',
'e_value' => '9e-78',
'bit_score' => '277',
'alignment_length' => '586',
'identity_percentage' => '33.28',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'AP00G35250' => array(
'gene_id' => 'AP00G35250',
'e_value' => '1e-77',
'bit_score' => '279',
'alignment_length' => '519',
'identity_percentage' => '34.87',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000068587' => array(
'gene_id' => 'ENSMUSG00000068587',
'e_value' => '2e-77',
'bit_score' => '282',
'alignment_length' => '935',
'identity_percentage' => '28.02',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00079G00080' => array(
'gene_id' => 'ATR_00079G00080',
'e_value' => '1e-76',
'bit_score' => '269',
'alignment_length' => '565',
'identity_percentage' => '32.57',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'AC00G02390' => array(
'gene_id' => 'AC00G02390',
'e_value' => '2e-75',
'bit_score' => '265',
'alignment_length' => '555',
'identity_percentage' => '31.17',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000027790' => array(
'gene_id' => 'ENSMUSG00000027790',
'e_value' => '8e-75',
'bit_score' => '274',
'alignment_length' => '650',
'identity_percentage' => '31.38',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000257335' => array(
'gene_id' => 'ENSG00000257335',
'e_value' => '4e-74',
'bit_score' => '273',
'alignment_length' => '846',
'identity_percentage' => '28.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000090402' => array(
'gene_id' => 'ENSG00000090402',
'e_value' => '4e-70',
'bit_score' => '260',
'alignment_length' => '836',
'identity_percentage' => '29.19',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000278563' => array(
'gene_id' => 'ENSG00000278563',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000257743' => array(
'gene_id' => 'ENSG00000257743',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'pte388210' => array(
'gene_id' => 'pte388210',
'e_value' => '3e-67',
'bit_score' => '245',
'alignment_length' => '645',
'identity_percentage' => '27.60',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte323710' => array(
'gene_id' => 'pte323710',
'e_value' => '3e-66',
'bit_score' => '243',
'alignment_length' => '655',
'identity_percentage' => '26.72',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte374950' => array(
'gene_id' => 'pte374950',
'e_value' => '2e-65',
'bit_score' => '240',
'alignment_length' => '648',
'identity_percentage' => '27.47',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_008G02740' => array(
'gene_id' => 'CNC64A_008G02740',
'e_value' => '2e-65',
'bit_score' => '244',
'alignment_length' => '634',
'identity_percentage' => '30.91',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'CV00G66180' => array(
'gene_id' => 'CV00G66180',
'e_value' => '5e-64',
'bit_score' => '237',
'alignment_length' => '743',
'identity_percentage' => '25.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CV00G87890' => array(
'gene_id' => 'CV00G87890',
'e_value' => '3e-62',
'bit_score' => '231',
'alignment_length' => '629',
'identity_percentage' => '26.55',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00017071' => array(
'gene_id' => 'WBGene00017071',
'e_value' => '5e-62',
'bit_score' => '231',
'alignment_length' => '684',
'identity_percentage' => '28.22',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'pte268290' => array(
'gene_id' => 'pte268290',
'e_value' => '2e-60',
'bit_score' => '225',
'alignment_length' => '593',
'identity_percentage' => '28.16',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte186640' => array(
'gene_id' => 'pte186640',
'e_value' => '1e-57',
'bit_score' => '217',
'alignment_length' => '598',
'identity_percentage' => '27.26',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.199g00040' => array(
'gene_id' => 'RCC4223.199g00040',
'e_value' => '3e-56',
'bit_score' => '212',
'alignment_length' => '497',
'identity_percentage' => '30.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'CV00G66200' => array(
'gene_id' => 'CV00G66200',
'e_value' => '6e-56',
'bit_score' => '209',
'alignment_length' => '659',
'identity_percentage' => '27.01',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'pte70280' => array(
'gene_id' => 'pte70280',
'e_value' => '3e-50',
'bit_score' => '194',
'alignment_length' => '678',
'identity_percentage' => '26.55',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_019G00790' => array(
'gene_id' => 'CNC64A_019G00790',
'e_value' => '2e-49',
'bit_score' => '183',
'alignment_length' => '345',
'identity_percentage' => '33.33',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'SPAC1039.11c' => array(
'gene_id' => 'SPAC1039.11c',
'e_value' => '3e-49',
'bit_score' => '193',
'alignment_length' => '298',
'identity_percentage' => '37.58',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'SPAC30D11.01c' => array(
'gene_id' => 'SPAC30D11.01c',
'e_value' => '9e-48',
'bit_score' => '188',
'alignment_length' => '352',
'identity_percentage' => '33.81',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'PP00281G00070' => array(
'gene_id' => 'PP00281G00070',
'e_value' => '3e-47',
'bit_score' => '181',
'alignment_length' => '501',
'identity_percentage' => '28.54',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'SPAPB24D3.10c' => array(
'gene_id' => 'SPAPB24D3.10c',
'e_value' => '3e-47',
'bit_score' => '187',
'alignment_length' => '360',
'identity_percentage' => '33.06',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'pte180100' => array(
'gene_id' => 'pte180100',
'e_value' => '6e-47',
'bit_score' => '185',
'alignment_length' => '734',
'identity_percentage' => '26.57',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00019895' => array(
'gene_id' => 'WBGene00019895',
'e_value' => '2e-45',
'bit_score' => '181',
'alignment_length' => '683',
'identity_percentage' => '25.92',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'phs92320' => array(
'gene_id' => 'phs92320',
'e_value' => '8e-45',
'bit_score' => '179',
'alignment_length' => '332',
'identity_percentage' => '34.34',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'gsu139510' => array(
'gene_id' => 'gsu139510',
'e_value' => '2e-42',
'bit_score' => '171',
'alignment_length' => '475',
'identity_percentage' => '27.16',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CV00G74030' => array(
'gene_id' => 'CV00G74030',
'e_value' => '2e-41',
'bit_score' => '169',
'alignment_length' => '291',
'identity_percentage' => '34.71',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G25410' => array(
'gene_id' => 'HE0000G25410',
'e_value' => '9e-41',
'bit_score' => '164',
'alignment_length' => '451',
'identity_percentage' => '27.94',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'CV00G33310' => array(
'gene_id' => 'CV00G33310',
'e_value' => '3e-39',
'bit_score' => '162',
'alignment_length' => '359',
'identity_percentage' => '30.92',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'emh746930' => array(
'gene_id' => 'emh746930',
'e_value' => '2e-38',
'bit_score' => '159',
'alignment_length' => '352',
'identity_percentage' => '32.39',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh564800' => array(
'gene_id' => 'emh564800',
'e_value' => '3e-37',
'bit_score' => '155',
'alignment_length' => '352',
'identity_percentage' => '32.10',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh552990' => array(
'gene_id' => 'emh552990',
'e_value' => '4e-37',
'bit_score' => '154',
'alignment_length' => '511',
'identity_percentage' => '27.79',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'phs71110' => array(
'gene_id' => 'phs71110',
'e_value' => '6e-33',
'bit_score' => '141',
'alignment_length' => '398',
'identity_percentage' => '29.90',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'CR03G11570' => array(
'gene_id' => 'CR03G11570',
'e_value' => '1e-32',
'bit_score' => '141',
'alignment_length' => '263',
'identity_percentage' => '33.46',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'CM06G01210' => array(
'gene_id' => 'CM06G01210',
'e_value' => '1e-27',
'bit_score' => '125',
'alignment_length' => '470',
'identity_percentage' => '26.38',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'gsu63580' => array(
'gene_id' => 'gsu63580',
'e_value' => '4e-27',
'bit_score' => '122',
'alignment_length' => '561',
'identity_percentage' => '22.82',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100114g11' => array(
'gene_id' => 'Naga_100114g11',
'e_value' => '2e-24',
'bit_score' => '114',
'alignment_length' => '434',
'identity_percentage' => '25.81',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_288G00010' => array(
'gene_id' => 'CNC64A_288G00010',
'e_value' => '7e-24',
'bit_score' => '106',
'alignment_length' => '193',
'identity_percentage' => '36.27',
'gf' => array(
[maximum depth reached]
)
),
'phs71090' => array(
'gene_id' => 'phs71090',
'e_value' => '4e-23',
'bit_score' => '107',
'alignment_length' => '260',
'identity_percentage' => '26.92',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'MP05G04870' => array(
'gene_id' => 'MP05G04870',
'e_value' => '2e-22',
'bit_score' => '107',
'alignment_length' => '398',
'identity_percentage' => '25.63',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'OT_04G02420' => array(
'gene_id' => 'OT_04G02420',
'e_value' => '1e-21',
'bit_score' => '104',
'alignment_length' => '372',
'identity_percentage' => '26.61',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'MP08G03280' => array(
'gene_id' => 'MP08G03280',
'e_value' => '7e-21',
'bit_score' => '102',
'alignment_length' => '440',
'identity_percentage' => '25.91',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_04G02780' => array(
'gene_id' => 'ORCC809_04G02780',
'e_value' => '9e-21',
'bit_score' => '100',
'alignment_length' => '408',
'identity_percentage' => '25.25',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'OT_08G03880' => array(
'gene_id' => 'OT_08G03880',
'e_value' => '2e-20',
'bit_score' => '101',
'alignment_length' => '357',
'identity_percentage' => '24.65',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OM_16G02430' => array(
'gene_id' => 'OM_16G02430',
'e_value' => '3e-20',
'bit_score' => '100',
'alignment_length' => '362',
'identity_percentage' => '25.97',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OL04G02410' => array(
'gene_id' => 'OL04G02410',
'e_value' => '6e-20',
'bit_score' => '97.4',
'alignment_length' => '405',
'identity_percentage' => '24.69',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_11G02870' => array(
'gene_id' => 'MRCC299_11G02870',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '413',
'identity_percentage' => '27.60',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'emh123040' => array(
'gene_id' => 'emh123040',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '216',
'identity_percentage' => '31.94',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh362880' => array(
'gene_id' => 'emh362880',
'e_value' => '2e-19',
'bit_score' => '98.2',
'alignment_length' => '190',
'identity_percentage' => '33.16',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'gsu137050' => array(
'gene_id' => 'gsu137050',
'e_value' => '2e-19',
'bit_score' => '97.8',
'alignment_length' => '390',
'identity_percentage' => '24.62',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'gsu133460' => array(
'gene_id' => 'gsu133460',
'e_value' => '2e-18',
'bit_score' => '91.7',
'alignment_length' => '255',
'identity_percentage' => '27.84',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'PP00041G01100' => array(
'gene_id' => 'PP00041G01100',
'e_value' => '6e-18',
'bit_score' => '93.6',
'alignment_length' => '499',
'identity_percentage' => '24.05',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_06G04670' => array(
'gene_id' => 'BPRRCC1105_06G04670',
'e_value' => '7e-18',
'bit_score' => '93.2',
'alignment_length' => '398',
'identity_percentage' => '24.87',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_08G03350' => array(
'gene_id' => 'MRCC299_08G03350',
'e_value' => '1e-17',
'bit_score' => '92.0',
'alignment_length' => '403',
'identity_percentage' => '25.56',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_12G00530' => array(
'gene_id' => 'ORCC809_12G00530',
'e_value' => '1e-17',
'bit_score' => '92.4',
'alignment_length' => '368',
'identity_percentage' => '26.36',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_034G00570' => array(
'gene_id' => 'CNC64A_034G00570',
'e_value' => '1e-17',
'bit_score' => '84.7',
'alignment_length' => '79',
'identity_percentage' => '49.37',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'OL08G03830' => array(
'gene_id' => 'OL08G03830',
'e_value' => '2e-17',
'bit_score' => '90.9',
'alignment_length' => '572',
'identity_percentage' => '22.73',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0261575' => array(
'gene_id' => 'FBgn0261575',
'e_value' => '5e-17',
'bit_score' => '90.1',
'alignment_length' => '379',
'identity_percentage' => '24.80',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_05G02990' => array(
'gene_id' => 'ORCC809_05G02990',
'e_value' => '5e-17',
'bit_score' => '90.5',
'alignment_length' => '213',
'identity_percentage' => '31.92',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'OL05G03060' => array(
'gene_id' => 'OL05G03060',
'e_value' => '6e-17',
'bit_score' => '89.4',
'alignment_length' => '387',
'identity_percentage' => '28.68',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'CV00G34570' => array(
'gene_id' => 'CV00G34570',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'OM_02G02640' => array(
'gene_id' => 'OM_02G02640',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '368',
'identity_percentage' => '25.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000046312' => array(
'gene_id' => 'ENSMUSG00000046312',
'e_value' => '8e-17',
'bit_score' => '89.4',
'alignment_length' => '398',
'identity_percentage' => '24.12',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.09g03870' => array(
'gene_id' => 'RCC4223.09g03870',
'e_value' => '4e-16',
'bit_score' => '87.4',
'alignment_length' => '198',
'identity_percentage' => '33.33',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000164976' => array(
'gene_id' => 'ENSG00000164976',
'e_value' => '5e-16',
'bit_score' => '87.0',
'alignment_length' => '395',
'identity_percentage' => '23.80',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'OM_03G03260' => array(
'gene_id' => 'OM_03G03260',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '207',
'identity_percentage' => '31.40',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_01G05990' => array(
'gene_id' => 'BPRRCC1105_01G05990',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '353',
'identity_percentage' => '23.51',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'PI00G61580' => array(
'gene_id' => 'PI00G61580',
'e_value' => '3e-15',
'bit_score' => '84.7',
'alignment_length' => '198',
'identity_percentage' => '32.83',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00095G00110' => array(
'gene_id' => 'ATR_00095G00110',
'e_value' => '5e-14',
'bit_score' => '80.5',
'alignment_length' => '461',
'identity_percentage' => '22.34',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_034G00560' => array(
'gene_id' => 'CNC64A_034G00560',
'e_value' => '5e-13',
'bit_score' => '76.6',
'alignment_length' => '343',
'identity_percentage' => '23.03',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'PP00065G00350' => array(
'gene_id' => 'PP00065G00350',
'e_value' => '1e-12',
'bit_score' => '75.1',
'alignment_length' => '311',
'identity_percentage' => '21.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'FC006G00220' => array(
'gene_id' => 'FC006G00220',
'e_value' => '1e-12',
'bit_score' => '76.3',
'alignment_length' => '314',
'identity_percentage' => '25.16',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_529G00010' => array(
'gene_id' => 'CNC64A_529G00010',
'e_value' => '2e-12',
'bit_score' => '70.5',
'alignment_length' => '89',
'identity_percentage' => '41.57',
'gf' => array(
[maximum depth reached]
)
),
'OT_05G03110' => array(
'gene_id' => 'OT_05G03110',
'e_value' => '2e-11',
'bit_score' => '72.0',
'alignment_length' => '216',
'identity_percentage' => '29.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'CM13G02020' => array(
'gene_id' => 'CM13G02020',
'e_value' => '8e-10',
'bit_score' => '67.0',
'alignment_length' => '218',
'identity_percentage' => '26.61',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0053080' => array(
'gene_id' => 'FBgn0053080',
'e_value' => '1e-09',
'bit_score' => '66.6',
'alignment_length' => '400',
'identity_percentage' => '22.50',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'emh755690' => array(
'gene_id' => 'emh755690',
'e_value' => '2e-09',
'bit_score' => '65.5',
'alignment_length' => '232',
'identity_percentage' => '26.29',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'MP02G01920' => array(
'gene_id' => 'MP02G01920',
'e_value' => '3e-09',
'bit_score' => '65.1',
'alignment_length' => '223',
'identity_percentage' => '26.46',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'pte584840' => array(
'gene_id' => 'pte584840',
'e_value' => '2e-08',
'bit_score' => '62.4',
'alignment_length' => '495',
'identity_percentage' => '18.59',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'emh344740' => array(
'gene_id' => 'emh344740',
'e_value' => '4e-08',
'bit_score' => '61.2',
'alignment_length' => '304',
'identity_percentage' => '23.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ccr117820' => array(
'gene_id' => 'ccr117820',
'e_value' => '1e-07',
'bit_score' => '59.7',
'alignment_length' => '423',
'identity_percentage' => '23.64',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'AA0007G01760' => array(
'gene_id' => 'AA0007G01760',
'e_value' => '4e-07',
'bit_score' => '58.2',
'alignment_length' => '411',
'identity_percentage' => '23.36',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
)
),
'similarity_hits_species' => array(
'ath' => array(
(int) 0 => 'AT5G63840',
(int) 1 => 'AT3G23640',
(int) 2 => 'AT5G11720',
(int) 3 => 'AT3G45940',
(int) 4 => 'AT1G68560'
),
'atr' => array(
(int) 0 => 'ATR_00065G01570',
(int) 1 => 'ATR_00048G01310',
(int) 2 => 'ATR_00092G00960',
(int) 3 => 'ATR_00079G00110',
(int) 4 => 'ATR_00079G00080',
(int) 5 => 'ATR_00095G00110'
),
'osa' => array(
(int) 0 => 'OS03G11720',
(int) 1 => 'OS06G46340',
(int) 2 => 'OS07G23944',
(int) 3 => 'OS07G23880',
(int) 4 => 'OS06G46284',
(int) 5 => 'OS01G03950'
),
'ppa' => array(
(int) 0 => 'PP00109G00830',
(int) 1 => 'PP00242G00250',
(int) 2 => 'PP00005G01250',
(int) 3 => 'PP00041G01080',
(int) 4 => 'PP00140G00390',
(int) 5 => 'PP00060G00720',
(int) 6 => 'PP00157G00350',
(int) 7 => 'PP00264G00160',
(int) 8 => 'PP00011G01860',
(int) 9 => 'PP00013G02430',
(int) 10 => 'PP00264G00120',
(int) 11 => 'PP00080G01120',
(int) 12 => 'PP00025G00520',
(int) 13 => 'PP00086G00660',
(int) 14 => 'PP00119G00640',
(int) 15 => 'PP00006G00120',
(int) 16 => 'PP00245G00510',
(int) 17 => 'PP00043G00100',
(int) 18 => 'PP00281G00070',
(int) 19 => 'PP00041G01100',
(int) 20 => 'PP00065G00350'
),
'acg' => array(
(int) 0 => 'AC00G77390',
(int) 1 => 'AC00G97780',
(int) 2 => 'AC00G02390'
),
'vca' => array(
(int) 0 => 'VC00G110660'
),
'cvu' => array(
(int) 0 => 'CV00G24690',
(int) 1 => 'CV00G66180',
(int) 2 => 'CV00G87890',
(int) 3 => 'CV00G66200',
(int) 4 => 'CV00G74030',
(int) 5 => 'CV00G33310',
(int) 6 => 'CV00G34570'
),
'pse3' => array(
(int) 0 => 'PI00G24040',
(int) 1 => 'PI00G61580'
),
'ddi' => array(
(int) 0 => 'DDB_G0269154',
(int) 1 => 'DDB_G0269790'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g01620',
(int) 1 => 'RCC4223.199g00040',
(int) 2 => 'RCC4223.09g03870'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_08G05390',
(int) 1 => 'MRCC299_11G02870',
(int) 2 => 'MRCC299_08G03350'
),
'cre' => array(
(int) 0 => 'CR03G10710',
(int) 1 => 'CR03G11570'
),
'ome' => array(
(int) 0 => 'OM_16G01380',
(int) 1 => 'OM_16G02430',
(int) 2 => 'OM_02G02640',
(int) 3 => 'OM_03G03260'
),
'ota' => array(
(int) 0 => 'OT_08G02830',
(int) 1 => 'OT_04G02420',
(int) 2 => 'OT_08G03880',
(int) 3 => 'OT_05G03110'
),
'olu' => array(
(int) 0 => 'OL08G02650',
(int) 1 => 'OL04G02410',
(int) 2 => 'OL08G03830',
(int) 3 => 'OL05G03060'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000071650',
(int) 1 => 'ENSMUSG00000062646',
(int) 2 => 'ENSMUSG00000068587',
(int) 3 => 'ENSMUSG00000027790',
(int) 4 => 'ENSMUSG00000046312'
),
'nga' => array(
(int) 0 => 'Naga_100017g38',
(int) 1 => 'Naga_100114g11'
),
'mpu' => array(
(int) 0 => 'MP05G06760',
(int) 1 => 'MP05G04870',
(int) 2 => 'MP08G03280',
(int) 3 => 'MP02G01920'
),
'fcy' => array(
(int) 0 => 'FC002G01800',
(int) 1 => 'FC006G00220'
),
'hom' => array(
(int) 0 => 'ENSG00000214013',
(int) 1 => 'ENSG00000257335',
(int) 2 => 'ENSG00000090402',
(int) 3 => 'ENSG00000278563',
(int) 4 => 'ENSG00000257743',
(int) 5 => 'ENSG00000164976'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_01G07160',
(int) 1 => 'BPRRCC1105_06G04670',
(int) 2 => 'BPRRCC1105_01G05990'
),
'ccr' => array(
(int) 0 => 'ccr158380',
(int) 1 => 'ccr117820'
),
'cel' => array(
(int) 0 => 'WBGene00009583',
(int) 1 => 'WBGene00018682',
(int) 2 => 'WBGene00017071',
(int) 3 => 'WBGene00019895'
),
'ptri' => array(
(int) 0 => 'PTI_05G01610'
),
'tps' => array(
(int) 0 => 'TP07G02080'
),
'drm' => array(
(int) 0 => 'FBgn0027588',
(int) 1 => 'FBgn0261575',
(int) 2 => 'FBgn0053080'
),
'emh' => array(
(int) 0 => 'emh160400',
(int) 1 => 'emh626580',
(int) 2 => 'emh472720',
(int) 3 => 'emh746930',
(int) 4 => 'emh564800',
(int) 5 => 'emh552990',
(int) 6 => 'emh123040',
(int) 7 => 'emh362880',
(int) 8 => 'emh755690',
(int) 9 => 'emh344740'
),
'phs' => array(
(int) 0 => 'phs303660',
(int) 1 => 'phs293220',
(int) 2 => 'phs293240',
(int) 3 => 'phs92320',
(int) 4 => 'phs71110',
(int) 5 => 'phs71090'
),
'hsp' => array(
(int) 0 => 'HE0000G07800',
(int) 1 => 'HE0000G25410'
),
'aan' => array(
(int) 0 => 'AA0001G01930',
(int) 1 => 'AA0007G01760'
),
'apr' => array(
(int) 0 => 'AP00G19080',
(int) 1 => 'AP00G35250'
),
'scp' => array(
(int) 0 => 'SPAC1002.03c',
(int) 1 => 'SPAC1039.11c',
(int) 2 => 'SPAC30D11.01c',
(int) 3 => 'SPAPB24D3.10c'
),
'gsu' => array(
(int) 0 => 'gsu126010',
(int) 1 => 'gsu139510',
(int) 2 => 'gsu63580',
(int) 3 => 'gsu137050',
(int) 4 => 'gsu133460'
),
'cme' => array(
(int) 0 => 'CM13G00820',
(int) 1 => 'CM06G01210',
(int) 2 => 'CM13G02020'
),
'sac' => array(
(int) 0 => 'YBR229C'
),
'esi' => array(
(int) 0 => 'ES0080G00420'
),
'orcc809' => array(
(int) 0 => 'ORCC809_08G02600',
(int) 1 => 'ORCC809_04G02780',
(int) 2 => 'ORCC809_12G00530',
(int) 3 => 'ORCC809_05G02990'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_025G00750',
(int) 1 => 'CNC64A_008G02740',
(int) 2 => 'CNC64A_019G00790',
(int) 3 => 'CNC64A_034G00570',
(int) 4 => 'CNC64A_034G00560'
),
'pte' => array(
(int) 0 => 'pte388210',
(int) 1 => 'pte323710',
(int) 2 => 'pte374950',
(int) 3 => 'pte268290',
(int) 4 => 'pte186640',
(int) 5 => 'pte70280',
(int) 6 => 'pte180100',
(int) 7 => 'pte584840'
)
),
'gene_id' => 'AT5G63840',
'all_species_index' => array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'all_species' => array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'gene_family_types_information' => array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
),
'gene_family_types_configuration' => array(),
'data_identifier' => 'AT5G63840',
'data_type' => 'gene_id',
'allow_async_use' => true,
'gene_placeholder' => 'ES0116G00040',
'gf_placeholder' => 'HOM03P017607',
'title_for_layout' => 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
)
$allowed_extra_sequences_types = array(
'aa' => 'Protein',
'dna' => 'DNA'
)
$allowed_editing_methods = array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
)
$allowed_tree_programs = array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
)
$similarity_hits_genes = array(
'AT5G63840' => array(
'gene_id' => 'AT5G63840',
'e_value' => '0.0',
'bit_score' => '1909',
'alignment_length' => '922',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ATR_00065G01570' => array(
'gene_id' => 'ATR_00065G01570',
'e_value' => '0.0',
'bit_score' => '1308',
'alignment_length' => '909',
'identity_percentage' => '67.88',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OS03G11720' => array(
'gene_id' => 'OS03G11720',
'e_value' => '0.0',
'bit_score' => '1258',
'alignment_length' => '920',
'identity_percentage' => '66.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PP00109G00830' => array(
'gene_id' => 'PP00109G00830',
'e_value' => '0.0',
'bit_score' => '1146',
'alignment_length' => '945',
'identity_percentage' => '59.15',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AC00G77390' => array(
'gene_id' => 'AC00G77390',
'e_value' => '0.0',
'bit_score' => '879',
'alignment_length' => '925',
'identity_percentage' => '48.54',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'VC00G110660' => array(
'gene_id' => 'VC00G110660',
'e_value' => '0.0',
'bit_score' => '865',
'alignment_length' => '939',
'identity_percentage' => '48.78',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CV00G24690' => array(
'gene_id' => 'CV00G24690',
'e_value' => '0.0',
'bit_score' => '856',
'alignment_length' => '933',
'identity_percentage' => '48.77',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PI00G24040' => array(
'gene_id' => 'PI00G24040',
'e_value' => '0.0',
'bit_score' => '852',
'alignment_length' => '938',
'identity_percentage' => '47.33',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'DDB_G0269154' => array(
'gene_id' => 'DDB_G0269154',
'e_value' => '0.0',
'bit_score' => '847',
'alignment_length' => '979',
'identity_percentage' => '45.45',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'RCC4223.04g01620' => array(
'gene_id' => 'RCC4223.04g01620',
'e_value' => '0.0',
'bit_score' => '845',
'alignment_length' => '942',
'identity_percentage' => '46.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'MRCC299_08G05390' => array(
'gene_id' => 'MRCC299_08G05390',
'e_value' => '0.0',
'bit_score' => '833',
'alignment_length' => '949',
'identity_percentage' => '46.58',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CR03G10710' => array(
'gene_id' => 'CR03G10710',
'e_value' => '0.0',
'bit_score' => '831',
'alignment_length' => '920',
'identity_percentage' => '49.13',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OM_16G01380' => array(
'gene_id' => 'OM_16G01380',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '983',
'identity_percentage' => '44.25',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OT_08G02830' => array(
'gene_id' => 'OT_08G02830',
'e_value' => '0.0',
'bit_score' => '818',
'alignment_length' => '957',
'identity_percentage' => '44.62',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OL08G02650' => array(
'gene_id' => 'OL08G02650',
'e_value' => '0.0',
'bit_score' => '806',
'alignment_length' => '845',
'identity_percentage' => '48.52',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSMUSG00000071650' => array(
'gene_id' => 'ENSMUSG00000071650',
'e_value' => '0.0',
'bit_score' => '798',
'alignment_length' => '976',
'identity_percentage' => '43.24',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'Naga_100017g38' => array(
'gene_id' => 'Naga_100017g38',
'e_value' => '0.0',
'bit_score' => '797',
'alignment_length' => '738',
'identity_percentage' => '52.03',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'MP05G06760' => array(
'gene_id' => 'MP05G06760',
'e_value' => '0.0',
'bit_score' => '796',
'alignment_length' => '1019',
'identity_percentage' => '43.47',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'FC002G01800' => array(
'gene_id' => 'FC002G01800',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '801',
'identity_percentage' => '48.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSMUSG00000062646' => array(
'gene_id' => 'ENSMUSG00000062646',
'e_value' => '0.0',
'bit_score' => '771',
'alignment_length' => '935',
'identity_percentage' => '42.14',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSG00000214013' => array(
'gene_id' => 'ENSG00000214013',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '937',
'identity_percentage' => '42.90',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'BPRRCC1105_01G07160' => array(
'gene_id' => 'BPRRCC1105_01G07160',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '941',
'identity_percentage' => '45.16',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ccr158380' => array(
'gene_id' => 'ccr158380',
'e_value' => '0.0',
'bit_score' => '751',
'alignment_length' => '763',
'identity_percentage' => '49.41',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'WBGene00009583' => array(
'gene_id' => 'WBGene00009583',
'e_value' => '0.0',
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'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
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'alignment_length' => '786',
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'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
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'alignment_length' => '748',
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'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
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'alignment_length' => '971',
'identity_percentage' => '39.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
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'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
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'alignment_length' => '723',
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'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
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'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh626580' => array(
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'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'WBGene00018682' => array(
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'alignment_length' => '880',
'identity_percentage' => '42.84',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'phs303660' => array(
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'e_value' => '0.0',
'bit_score' => '724',
'alignment_length' => '990',
'identity_percentage' => '42.42',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'HE0000G07800' => array(
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'e_value' => '0.0',
'bit_score' => '685',
'alignment_length' => '791',
'identity_percentage' => '46.65',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AA0001G01930' => array(
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'e_value' => '0.0',
'bit_score' => '701',
'alignment_length' => '668',
'identity_percentage' => '51.65',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AP00G19080' => array(
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'e_value' => '0.0',
'bit_score' => '669',
'alignment_length' => '660',
'identity_percentage' => '51.82',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'SPAC1002.03c' => array(
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'e_value' => '0.0',
'bit_score' => '650',
'alignment_length' => '880',
'identity_percentage' => '39.66',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'gsu126010' => array(
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'e_value' => '0.0',
'bit_score' => '637',
'alignment_length' => '922',
'identity_percentage' => '38.07',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CM13G00820' => array(
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'e_value' => '0.0',
'bit_score' => '600',
'alignment_length' => '987',
'identity_percentage' => '37.18',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'YBR229C' => array(
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'e_value' => '0.0',
'bit_score' => '560',
'alignment_length' => '980',
'identity_percentage' => '34.08',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ES0080G00420' => array(
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'e_value' => '9e-177',
'bit_score' => '530',
'alignment_length' => '572',
'identity_percentage' => '46.68',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ORCC809_08G02600' => array(
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'e_value' => '4e-152',
'bit_score' => '484',
'alignment_length' => '406',
'identity_percentage' => '57.39',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh472720' => array(
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'e_value' => '1e-131',
'bit_score' => '427',
'alignment_length' => '642',
'identity_percentage' => '38.63',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P209776'
)
),
'PP00242G00250' => array(
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'bit_score' => '361',
'alignment_length' => '496',
'identity_percentage' => '39.72',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00005G01250' => array(
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'e_value' => '2e-102',
'bit_score' => '350',
'alignment_length' => '581',
'identity_percentage' => '36.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00041G01080' => array(
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'e_value' => '5e-102',
'bit_score' => '349',
'alignment_length' => '496',
'identity_percentage' => '38.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00140G00390' => array(
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'e_value' => '1e-101',
'bit_score' => '346',
'alignment_length' => '496',
'identity_percentage' => '37.90',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'AT3G23640' => array(
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'e_value' => '1e-97',
'bit_score' => '335',
'alignment_length' => '586',
'identity_percentage' => '34.98',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'OS06G46340' => array(
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'e_value' => '3e-95',
'bit_score' => '326',
'alignment_length' => '608',
'identity_percentage' => '35.20',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'DDB_G0269790' => array(
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'e_value' => '1e-94',
'bit_score' => '324',
'alignment_length' => '772',
'identity_percentage' => '29.79',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00060G00720' => array(
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'e_value' => '2e-94',
'bit_score' => '326',
'alignment_length' => '522',
'identity_percentage' => '36.02',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'OS07G23944' => array(
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'e_value' => '5e-93',
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'alignment_length' => '615',
'identity_percentage' => '33.82',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'ATR_00048G01310' => array(
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'e_value' => '6e-93',
'bit_score' => '323',
'alignment_length' => '495',
'identity_percentage' => '36.36',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00157G00350' => array(
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'alignment_length' => '726',
'identity_percentage' => '31.82',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS07G23880' => array(
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'alignment_length' => '572',
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'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'AT5G11720' => array(
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'e_value' => '1e-90',
'bit_score' => '314',
'alignment_length' => '859',
'identity_percentage' => '29.57',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS06G46284' => array(
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'alignment_length' => '607',
'identity_percentage' => '34.27',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs293220' => array(
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'bit_score' => '311',
'alignment_length' => '667',
'identity_percentage' => '31.33',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00092G00960' => array(
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'alignment_length' => '657',
'identity_percentage' => '31.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
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'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs293240' => array(
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'alignment_length' => '682',
'identity_percentage' => '31.09',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00079G00110' => array(
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'e_value' => '2e-89',
'bit_score' => '307',
'alignment_length' => '705',
'identity_percentage' => '31.91',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00264G00160' => array(
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'bit_score' => '303',
'alignment_length' => '736',
'identity_percentage' => '30.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00011G01860' => array(
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'e_value' => '1e-86',
'bit_score' => '303',
'alignment_length' => '760',
'identity_percentage' => '30.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AT3G45940' => array(
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'e_value' => '1e-86',
'bit_score' => '302',
'alignment_length' => '862',
'identity_percentage' => '28.89',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00013G02430' => array(
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'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '716',
'identity_percentage' => '30.31',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00264G00120' => array(
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'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '746',
'identity_percentage' => '29.62',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00080G01120' => array(
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'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '765',
'identity_percentage' => '30.07',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00025G00520' => array(
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'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '740',
'identity_percentage' => '29.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS01G03950' => array(
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'e_value' => '1e-83',
'bit_score' => '295',
'alignment_length' => '706',
'identity_percentage' => '30.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00086G00660' => array(
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'e_value' => '1e-83',
'bit_score' => '293',
'alignment_length' => '706',
'identity_percentage' => '30.03',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00119G00640' => array(
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'e_value' => '2e-82',
'bit_score' => '291',
'alignment_length' => '729',
'identity_percentage' => '29.36',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AT1G68560' => array(
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'e_value' => '2e-81',
'bit_score' => '288',
'alignment_length' => '903',
'identity_percentage' => '27.13',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00006G00120' => array(
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'e_value' => '2e-80',
'bit_score' => '285',
'alignment_length' => '723',
'identity_percentage' => '28.49',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CNC64A_025G00750' => array(
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'e_value' => '2e-80',
'bit_score' => '276',
'alignment_length' => '384',
'identity_percentage' => '44.53',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PP00245G00510' => array(
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'e_value' => '4e-79',
'bit_score' => '281',
'alignment_length' => '747',
'identity_percentage' => '28.78',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00043G00100' => array(
'gene_id' => 'PP00043G00100',
'e_value' => '5e-78',
'bit_score' => '278',
'alignment_length' => '655',
'identity_percentage' => '30.69',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AC00G97780' => array(
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'e_value' => '9e-78',
'bit_score' => '277',
'alignment_length' => '586',
'identity_percentage' => '33.28',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AP00G35250' => array(
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'e_value' => '1e-77',
'bit_score' => '279',
'alignment_length' => '519',
'identity_percentage' => '34.87',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSMUSG00000068587' => array(
'gene_id' => 'ENSMUSG00000068587',
'e_value' => '2e-77',
'bit_score' => '282',
'alignment_length' => '935',
'identity_percentage' => '28.02',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00079G00080' => array(
'gene_id' => 'ATR_00079G00080',
'e_value' => '1e-76',
'bit_score' => '269',
'alignment_length' => '565',
'identity_percentage' => '32.57',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AC00G02390' => array(
'gene_id' => 'AC00G02390',
'e_value' => '2e-75',
'bit_score' => '265',
'alignment_length' => '555',
'identity_percentage' => '31.17',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSMUSG00000027790' => array(
'gene_id' => 'ENSMUSG00000027790',
'e_value' => '8e-75',
'bit_score' => '274',
'alignment_length' => '650',
'identity_percentage' => '31.38',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000257335' => array(
'gene_id' => 'ENSG00000257335',
'e_value' => '4e-74',
'bit_score' => '273',
'alignment_length' => '846',
'identity_percentage' => '28.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000090402' => array(
'gene_id' => 'ENSG00000090402',
'e_value' => '4e-70',
'bit_score' => '260',
'alignment_length' => '836',
'identity_percentage' => '29.19',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000278563' => array(
'gene_id' => 'ENSG00000278563',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000257743' => array(
'gene_id' => 'ENSG00000257743',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte388210' => array(
'gene_id' => 'pte388210',
'e_value' => '3e-67',
'bit_score' => '245',
'alignment_length' => '645',
'identity_percentage' => '27.60',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte323710' => array(
'gene_id' => 'pte323710',
'e_value' => '3e-66',
'bit_score' => '243',
'alignment_length' => '655',
'identity_percentage' => '26.72',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte374950' => array(
'gene_id' => 'pte374950',
'e_value' => '2e-65',
'bit_score' => '240',
'alignment_length' => '648',
'identity_percentage' => '27.47',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CNC64A_008G02740' => array(
'gene_id' => 'CNC64A_008G02740',
'e_value' => '2e-65',
'bit_score' => '244',
'alignment_length' => '634',
'identity_percentage' => '30.91',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G66180' => array(
'gene_id' => 'CV00G66180',
'e_value' => '5e-64',
'bit_score' => '237',
'alignment_length' => '743',
'identity_percentage' => '25.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G87890' => array(
'gene_id' => 'CV00G87890',
'e_value' => '3e-62',
'bit_score' => '231',
'alignment_length' => '629',
'identity_percentage' => '26.55',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'WBGene00017071' => array(
'gene_id' => 'WBGene00017071',
'e_value' => '5e-62',
'bit_score' => '231',
'alignment_length' => '684',
'identity_percentage' => '28.22',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte268290' => array(
'gene_id' => 'pte268290',
'e_value' => '2e-60',
'bit_score' => '225',
'alignment_length' => '593',
'identity_percentage' => '28.16',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte186640' => array(
'gene_id' => 'pte186640',
'e_value' => '1e-57',
'bit_score' => '217',
'alignment_length' => '598',
'identity_percentage' => '27.26',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'RCC4223.199g00040' => array(
'gene_id' => 'RCC4223.199g00040',
'e_value' => '3e-56',
'bit_score' => '212',
'alignment_length' => '497',
'identity_percentage' => '30.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'CV00G66200' => array(
'gene_id' => 'CV00G66200',
'e_value' => '6e-56',
'bit_score' => '209',
'alignment_length' => '659',
'identity_percentage' => '27.01',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte70280' => array(
'gene_id' => 'pte70280',
'e_value' => '3e-50',
'bit_score' => '194',
'alignment_length' => '678',
'identity_percentage' => '26.55',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P050433'
)
),
'CNC64A_019G00790' => array(
'gene_id' => 'CNC64A_019G00790',
'e_value' => '2e-49',
'bit_score' => '183',
'alignment_length' => '345',
'identity_percentage' => '33.33',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P080455'
)
),
'SPAC1039.11c' => array(
'gene_id' => 'SPAC1039.11c',
'e_value' => '3e-49',
'bit_score' => '193',
'alignment_length' => '298',
'identity_percentage' => '37.58',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'SPAC30D11.01c' => array(
'gene_id' => 'SPAC30D11.01c',
'e_value' => '9e-48',
'bit_score' => '188',
'alignment_length' => '352',
'identity_percentage' => '33.81',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00281G00070' => array(
'gene_id' => 'PP00281G00070',
'e_value' => '3e-47',
'bit_score' => '181',
'alignment_length' => '501',
'identity_percentage' => '28.54',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'SPAPB24D3.10c' => array(
'gene_id' => 'SPAPB24D3.10c',
'e_value' => '3e-47',
'bit_score' => '187',
'alignment_length' => '360',
'identity_percentage' => '33.06',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte180100' => array(
'gene_id' => 'pte180100',
'e_value' => '6e-47',
'bit_score' => '185',
'alignment_length' => '734',
'identity_percentage' => '26.57',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P050433'
)
),
'WBGene00019895' => array(
'gene_id' => 'WBGene00019895',
'e_value' => '2e-45',
'bit_score' => '181',
'alignment_length' => '683',
'identity_percentage' => '25.92',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs92320' => array(
'gene_id' => 'phs92320',
'e_value' => '8e-45',
'bit_score' => '179',
'alignment_length' => '332',
'identity_percentage' => '34.34',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P174336'
)
),
'gsu139510' => array(
'gene_id' => 'gsu139510',
'e_value' => '2e-42',
'bit_score' => '171',
'alignment_length' => '475',
'identity_percentage' => '27.16',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'CV00G74030' => array(
'gene_id' => 'CV00G74030',
'e_value' => '2e-41',
'bit_score' => '169',
'alignment_length' => '291',
'identity_percentage' => '34.71',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'HE0000G25410' => array(
'gene_id' => 'HE0000G25410',
'e_value' => '9e-41',
'bit_score' => '164',
'alignment_length' => '451',
'identity_percentage' => '27.94',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G33310' => array(
'gene_id' => 'CV00G33310',
'e_value' => '3e-39',
'bit_score' => '162',
'alignment_length' => '359',
'identity_percentage' => '30.92',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'emh746930' => array(
'gene_id' => 'emh746930',
'e_value' => '2e-38',
'bit_score' => '159',
'alignment_length' => '352',
'identity_percentage' => '32.39',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'emh564800' => array(
'gene_id' => 'emh564800',
'e_value' => '3e-37',
'bit_score' => '155',
'alignment_length' => '352',
'identity_percentage' => '32.10',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'emh552990' => array(
'gene_id' => 'emh552990',
'e_value' => '4e-37',
'bit_score' => '154',
'alignment_length' => '511',
'identity_percentage' => '27.79',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P201802'
)
),
'phs71110' => array(
'gene_id' => 'phs71110',
'e_value' => '6e-33',
'bit_score' => '141',
'alignment_length' => '398',
'identity_percentage' => '29.90',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P051673'
)
),
'CR03G11570' => array(
'gene_id' => 'CR03G11570',
'e_value' => '1e-32',
'bit_score' => '141',
'alignment_length' => '263',
'identity_percentage' => '33.46',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CM06G01210' => array(
'gene_id' => 'CM06G01210',
'e_value' => '1e-27',
'bit_score' => '125',
'alignment_length' => '470',
'identity_percentage' => '26.38',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'gsu63580' => array(
'gene_id' => 'gsu63580',
'e_value' => '4e-27',
'bit_score' => '122',
'alignment_length' => '561',
'identity_percentage' => '22.82',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'Naga_100114g11' => array(
'gene_id' => 'Naga_100114g11',
'e_value' => '2e-24',
'bit_score' => '114',
'alignment_length' => '434',
'identity_percentage' => '25.81',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_288G00010' => array(
'gene_id' => 'CNC64A_288G00010',
'e_value' => '7e-24',
'bit_score' => '106',
'alignment_length' => '193',
'identity_percentage' => '36.27',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P079153'
)
),
'phs71090' => array(
'gene_id' => 'phs71090',
'e_value' => '4e-23',
'bit_score' => '107',
'alignment_length' => '260',
'identity_percentage' => '26.92',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P104467'
)
),
'MP05G04870' => array(
'gene_id' => 'MP05G04870',
'e_value' => '2e-22',
'bit_score' => '107',
'alignment_length' => '398',
'identity_percentage' => '25.63',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OT_04G02420' => array(
'gene_id' => 'OT_04G02420',
'e_value' => '1e-21',
'bit_score' => '104',
'alignment_length' => '372',
'identity_percentage' => '26.61',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MP08G03280' => array(
'gene_id' => 'MP08G03280',
'e_value' => '7e-21',
'bit_score' => '102',
'alignment_length' => '440',
'identity_percentage' => '25.91',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ORCC809_04G02780' => array(
'gene_id' => 'ORCC809_04G02780',
'e_value' => '9e-21',
'bit_score' => '100',
'alignment_length' => '408',
'identity_percentage' => '25.25',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OT_08G03880' => array(
'gene_id' => 'OT_08G03880',
'e_value' => '2e-20',
'bit_score' => '101',
'alignment_length' => '357',
'identity_percentage' => '24.65',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OM_16G02430' => array(
'gene_id' => 'OM_16G02430',
'e_value' => '3e-20',
'bit_score' => '100',
'alignment_length' => '362',
'identity_percentage' => '25.97',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OL04G02410' => array(
'gene_id' => 'OL04G02410',
'e_value' => '6e-20',
'bit_score' => '97.4',
'alignment_length' => '405',
'identity_percentage' => '24.69',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MRCC299_11G02870' => array(
'gene_id' => 'MRCC299_11G02870',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '413',
'identity_percentage' => '27.60',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'emh123040' => array(
'gene_id' => 'emh123040',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '216',
'identity_percentage' => '31.94',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P048023'
)
),
'emh362880' => array(
'gene_id' => 'emh362880',
'e_value' => '2e-19',
'bit_score' => '98.2',
'alignment_length' => '190',
'identity_percentage' => '33.16',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P048023'
)
),
'gsu137050' => array(
'gene_id' => 'gsu137050',
'e_value' => '2e-19',
'bit_score' => '97.8',
'alignment_length' => '390',
'identity_percentage' => '24.62',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'gsu133460' => array(
'gene_id' => 'gsu133460',
'e_value' => '2e-18',
'bit_score' => '91.7',
'alignment_length' => '255',
'identity_percentage' => '27.84',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'PP00041G01100' => array(
'gene_id' => 'PP00041G01100',
'e_value' => '6e-18',
'bit_score' => '93.6',
'alignment_length' => '499',
'identity_percentage' => '24.05',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'BPRRCC1105_06G04670' => array(
'gene_id' => 'BPRRCC1105_06G04670',
'e_value' => '7e-18',
'bit_score' => '93.2',
'alignment_length' => '398',
'identity_percentage' => '24.87',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MRCC299_08G03350' => array(
'gene_id' => 'MRCC299_08G03350',
'e_value' => '1e-17',
'bit_score' => '92.0',
'alignment_length' => '403',
'identity_percentage' => '25.56',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'ORCC809_12G00530' => array(
'gene_id' => 'ORCC809_12G00530',
'e_value' => '1e-17',
'bit_score' => '92.4',
'alignment_length' => '368',
'identity_percentage' => '26.36',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_034G00570' => array(
'gene_id' => 'CNC64A_034G00570',
'e_value' => '1e-17',
'bit_score' => '84.7',
'alignment_length' => '79',
'identity_percentage' => '49.37',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P113797'
)
),
'OL08G03830' => array(
'gene_id' => 'OL08G03830',
'e_value' => '2e-17',
'bit_score' => '90.9',
'alignment_length' => '572',
'identity_percentage' => '22.73',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'FBgn0261575' => array(
'gene_id' => 'FBgn0261575',
'e_value' => '5e-17',
'bit_score' => '90.1',
'alignment_length' => '379',
'identity_percentage' => '24.80',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ORCC809_05G02990' => array(
'gene_id' => 'ORCC809_05G02990',
'e_value' => '5e-17',
'bit_score' => '90.5',
'alignment_length' => '213',
'identity_percentage' => '31.92',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OL05G03060' => array(
'gene_id' => 'OL05G03060',
'e_value' => '6e-17',
'bit_score' => '89.4',
'alignment_length' => '387',
'identity_percentage' => '28.68',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'CV00G34570' => array(
'gene_id' => 'CV00G34570',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OM_02G02640' => array(
'gene_id' => 'OM_02G02640',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '368',
'identity_percentage' => '25.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ENSMUSG00000046312' => array(
'gene_id' => 'ENSMUSG00000046312',
'e_value' => '8e-17',
'bit_score' => '89.4',
'alignment_length' => '398',
'identity_percentage' => '24.12',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'RCC4223.09g03870' => array(
'gene_id' => 'RCC4223.09g03870',
'e_value' => '4e-16',
'bit_score' => '87.4',
'alignment_length' => '198',
'identity_percentage' => '33.33',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ENSG00000164976' => array(
'gene_id' => 'ENSG00000164976',
'e_value' => '5e-16',
'bit_score' => '87.0',
'alignment_length' => '395',
'identity_percentage' => '23.80',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OM_03G03260' => array(
'gene_id' => 'OM_03G03260',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '207',
'identity_percentage' => '31.40',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'BPRRCC1105_01G05990' => array(
'gene_id' => 'BPRRCC1105_01G05990',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '353',
'identity_percentage' => '23.51',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'PI00G61580' => array(
'gene_id' => 'PI00G61580',
'e_value' => '3e-15',
'bit_score' => '84.7',
'alignment_length' => '198',
'identity_percentage' => '32.83',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ATR_00095G00110' => array(
'gene_id' => 'ATR_00095G00110',
'e_value' => '5e-14',
'bit_score' => '80.5',
'alignment_length' => '461',
'identity_percentage' => '22.34',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_034G00560' => array(
'gene_id' => 'CNC64A_034G00560',
'e_value' => '5e-13',
'bit_score' => '76.6',
'alignment_length' => '343',
'identity_percentage' => '23.03',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P158659'
)
),
'PP00065G00350' => array(
'gene_id' => 'PP00065G00350',
'e_value' => '1e-12',
'bit_score' => '75.1',
'alignment_length' => '311',
'identity_percentage' => '21.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P159804'
)
),
'FC006G00220' => array(
'gene_id' => 'FC006G00220',
'e_value' => '1e-12',
'bit_score' => '76.3',
'alignment_length' => '314',
'identity_percentage' => '25.16',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'CNC64A_529G00010' => array(
'gene_id' => 'CNC64A_529G00010',
'e_value' => '2e-12',
'bit_score' => '70.5',
'alignment_length' => '89',
'identity_percentage' => '41.57',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P106179'
)
),
'OT_05G03110' => array(
'gene_id' => 'OT_05G03110',
'e_value' => '2e-11',
'bit_score' => '72.0',
'alignment_length' => '216',
'identity_percentage' => '29.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'CM13G02020' => array(
'gene_id' => 'CM13G02020',
'e_value' => '8e-10',
'bit_score' => '67.0',
'alignment_length' => '218',
'identity_percentage' => '26.61',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P093918'
)
),
'FBgn0053080' => array(
'gene_id' => 'FBgn0053080',
'e_value' => '1e-09',
'bit_score' => '66.6',
'alignment_length' => '400',
'identity_percentage' => '22.50',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P200983'
)
),
'emh755690' => array(
'gene_id' => 'emh755690',
'e_value' => '2e-09',
'bit_score' => '65.5',
'alignment_length' => '232',
'identity_percentage' => '26.29',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P144442'
)
),
'MP02G01920' => array(
'gene_id' => 'MP02G01920',
'e_value' => '3e-09',
'bit_score' => '65.1',
'alignment_length' => '223',
'identity_percentage' => '26.46',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'pte584840' => array(
'gene_id' => 'pte584840',
'e_value' => '2e-08',
'bit_score' => '62.4',
'alignment_length' => '495',
'identity_percentage' => '18.59',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P110780'
)
),
'emh344740' => array(
'gene_id' => 'emh344740',
'e_value' => '4e-08',
'bit_score' => '61.2',
'alignment_length' => '304',
'identity_percentage' => '23.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'ccr117820' => array(
'gene_id' => 'ccr117820',
'e_value' => '1e-07',
'bit_score' => '59.7',
'alignment_length' => '423',
'identity_percentage' => '23.64',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'AA0007G01760' => array(
'gene_id' => 'AA0007G01760',
'e_value' => '4e-07',
'bit_score' => '58.2',
'alignment_length' => '411',
'identity_percentage' => '23.36',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
)
)
$similarity_hits_species = array(
'ath' => array(
(int) 0 => 'AT5G63840',
(int) 1 => 'AT3G23640',
(int) 2 => 'AT5G11720',
(int) 3 => 'AT3G45940',
(int) 4 => 'AT1G68560'
),
'atr' => array(
(int) 0 => 'ATR_00065G01570',
(int) 1 => 'ATR_00048G01310',
(int) 2 => 'ATR_00092G00960',
(int) 3 => 'ATR_00079G00110',
(int) 4 => 'ATR_00079G00080',
(int) 5 => 'ATR_00095G00110'
),
'osa' => array(
(int) 0 => 'OS03G11720',
(int) 1 => 'OS06G46340',
(int) 2 => 'OS07G23944',
(int) 3 => 'OS07G23880',
(int) 4 => 'OS06G46284',
(int) 5 => 'OS01G03950'
),
'ppa' => array(
(int) 0 => 'PP00109G00830',
(int) 1 => 'PP00242G00250',
(int) 2 => 'PP00005G01250',
(int) 3 => 'PP00041G01080',
(int) 4 => 'PP00140G00390',
(int) 5 => 'PP00060G00720',
(int) 6 => 'PP00157G00350',
(int) 7 => 'PP00264G00160',
(int) 8 => 'PP00011G01860',
(int) 9 => 'PP00013G02430',
(int) 10 => 'PP00264G00120',
(int) 11 => 'PP00080G01120',
(int) 12 => 'PP00025G00520',
(int) 13 => 'PP00086G00660',
(int) 14 => 'PP00119G00640',
(int) 15 => 'PP00006G00120',
(int) 16 => 'PP00245G00510',
(int) 17 => 'PP00043G00100',
(int) 18 => 'PP00281G00070',
(int) 19 => 'PP00041G01100',
(int) 20 => 'PP00065G00350'
),
'acg' => array(
(int) 0 => 'AC00G77390',
(int) 1 => 'AC00G97780',
(int) 2 => 'AC00G02390'
),
'vca' => array(
(int) 0 => 'VC00G110660'
),
'cvu' => array(
(int) 0 => 'CV00G24690',
(int) 1 => 'CV00G66180',
(int) 2 => 'CV00G87890',
(int) 3 => 'CV00G66200',
(int) 4 => 'CV00G74030',
(int) 5 => 'CV00G33310',
(int) 6 => 'CV00G34570'
),
'pse3' => array(
(int) 0 => 'PI00G24040',
(int) 1 => 'PI00G61580'
),
'ddi' => array(
(int) 0 => 'DDB_G0269154',
(int) 1 => 'DDB_G0269790'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g01620',
(int) 1 => 'RCC4223.199g00040',
(int) 2 => 'RCC4223.09g03870'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_08G05390',
(int) 1 => 'MRCC299_11G02870',
(int) 2 => 'MRCC299_08G03350'
),
'cre' => array(
(int) 0 => 'CR03G10710',
(int) 1 => 'CR03G11570'
),
'ome' => array(
(int) 0 => 'OM_16G01380',
(int) 1 => 'OM_16G02430',
(int) 2 => 'OM_02G02640',
(int) 3 => 'OM_03G03260'
),
'ota' => array(
(int) 0 => 'OT_08G02830',
(int) 1 => 'OT_04G02420',
(int) 2 => 'OT_08G03880',
(int) 3 => 'OT_05G03110'
),
'olu' => array(
(int) 0 => 'OL08G02650',
(int) 1 => 'OL04G02410',
(int) 2 => 'OL08G03830',
(int) 3 => 'OL05G03060'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000071650',
(int) 1 => 'ENSMUSG00000062646',
(int) 2 => 'ENSMUSG00000068587',
(int) 3 => 'ENSMUSG00000027790',
(int) 4 => 'ENSMUSG00000046312'
),
'nga' => array(
(int) 0 => 'Naga_100017g38',
(int) 1 => 'Naga_100114g11'
),
'mpu' => array(
(int) 0 => 'MP05G06760',
(int) 1 => 'MP05G04870',
(int) 2 => 'MP08G03280',
(int) 3 => 'MP02G01920'
),
'fcy' => array(
(int) 0 => 'FC002G01800',
(int) 1 => 'FC006G00220'
),
'hom' => array(
(int) 0 => 'ENSG00000214013',
(int) 1 => 'ENSG00000257335',
(int) 2 => 'ENSG00000090402',
(int) 3 => 'ENSG00000278563',
(int) 4 => 'ENSG00000257743',
(int) 5 => 'ENSG00000164976'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_01G07160',
(int) 1 => 'BPRRCC1105_06G04670',
(int) 2 => 'BPRRCC1105_01G05990'
),
'ccr' => array(
(int) 0 => 'ccr158380',
(int) 1 => 'ccr117820'
),
'cel' => array(
(int) 0 => 'WBGene00009583',
(int) 1 => 'WBGene00018682',
(int) 2 => 'WBGene00017071',
(int) 3 => 'WBGene00019895'
),
'ptri' => array(
(int) 0 => 'PTI_05G01610'
),
'tps' => array(
(int) 0 => 'TP07G02080'
),
'drm' => array(
(int) 0 => 'FBgn0027588',
(int) 1 => 'FBgn0261575',
(int) 2 => 'FBgn0053080'
),
'emh' => array(
(int) 0 => 'emh160400',
(int) 1 => 'emh626580',
(int) 2 => 'emh472720',
(int) 3 => 'emh746930',
(int) 4 => 'emh564800',
(int) 5 => 'emh552990',
(int) 6 => 'emh123040',
(int) 7 => 'emh362880',
(int) 8 => 'emh755690',
(int) 9 => 'emh344740'
),
'phs' => array(
(int) 0 => 'phs303660',
(int) 1 => 'phs293220',
(int) 2 => 'phs293240',
(int) 3 => 'phs92320',
(int) 4 => 'phs71110',
(int) 5 => 'phs71090'
),
'hsp' => array(
(int) 0 => 'HE0000G07800',
(int) 1 => 'HE0000G25410'
),
'aan' => array(
(int) 0 => 'AA0001G01930',
(int) 1 => 'AA0007G01760'
),
'apr' => array(
(int) 0 => 'AP00G19080',
(int) 1 => 'AP00G35250'
),
'scp' => array(
(int) 0 => 'SPAC1002.03c',
(int) 1 => 'SPAC1039.11c',
(int) 2 => 'SPAC30D11.01c',
(int) 3 => 'SPAPB24D3.10c'
),
'gsu' => array(
(int) 0 => 'gsu126010',
(int) 1 => 'gsu139510',
(int) 2 => 'gsu63580',
(int) 3 => 'gsu137050',
(int) 4 => 'gsu133460'
),
'cme' => array(
(int) 0 => 'CM13G00820',
(int) 1 => 'CM06G01210',
(int) 2 => 'CM13G02020'
),
'sac' => array(
(int) 0 => 'YBR229C'
),
'esi' => array(
(int) 0 => 'ES0080G00420'
),
'orcc809' => array(
(int) 0 => 'ORCC809_08G02600',
(int) 1 => 'ORCC809_04G02780',
(int) 2 => 'ORCC809_12G00530',
(int) 3 => 'ORCC809_05G02990'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_025G00750',
(int) 1 => 'CNC64A_008G02740',
(int) 2 => 'CNC64A_019G00790',
(int) 3 => 'CNC64A_034G00570',
(int) 4 => 'CNC64A_034G00560'
),
'pte' => array(
(int) 0 => 'pte388210',
(int) 1 => 'pte323710',
(int) 2 => 'pte374950',
(int) 3 => 'pte268290',
(int) 4 => 'pte186640',
(int) 5 => 'pte70280',
(int) 6 => 'pte180100',
(int) 7 => 'pte584840'
)
)
$gene_id = 'AT5G63840'
$all_species_index = array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$all_species = array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$gene_family_types_information = array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
)
$gene_family_types_configuration = array()
$data_identifier = 'AT5G63840'
$data_type = 'gene_id'
$allow_async_use = true
$gene_placeholder = 'ES0116G00040'
$gf_placeholder = 'HOM03P017607'
$title_for_layout = 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
$collapse1 = ''
$collapse2 = 'collapse in'
$similarity_hit = array(
'gene_id' => 'CNC64A_529G00010',
'e_value' => '2e-12',
'bit_score' => '70.5',
'alignment_length' => '89',
'identity_percentage' => '41.57',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P106179'
)
)
$checked = null
$similarity_hit_gene = 'CNC64A_529G00010'
include - APP/View/Analysis/custom_tree_creation.ctp, line 169
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::render() - CORE/Cake/View/View.php, line 473
Controller::render() - CORE/Cake/Controller/Controller.php, line 963
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167
[main] - APP/webroot/index.php, line 146
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]Code Context echo "<td><input type='checkbox' name='selected_genes[]' value='".$similarity_hit['gene_id']."' ".$checked." /></td>\n";
echo "<td>".$this->Html->link($similarity_hit_gene,array("controller"=>"genes","action"=>"view",$similarity_hit_gene),array("target"=>"_blank"))."</td>\n";
echo "<td>".$this->Html->link($similarity_hit['common_name'],array("controller"=>"organism","action"=>"view",urlencode($similarity_hit['common_name'])))."</td>\n";
$viewFile = '/xtras/group/biocomp/plaza/versions/plaza_pico_03/app/View/Analysis/custom_tree_creation.ctp'
$dataForView = array(
'allowed_extra_sequences_types' => array(
'aa' => 'Protein',
'dna' => 'DNA'
),
'allowed_editing_methods' => array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
),
'allowed_tree_programs' => array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
),
'allowed_msa_programs' => array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
),
'allowed_number_blasthits' => array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
),
'similarity_hits_genes' => array(
'AT5G63840' => array(
'gene_id' => 'AT5G63840',
'e_value' => '0.0',
'bit_score' => '1909',
'alignment_length' => '922',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00065G01570' => array(
'gene_id' => 'ATR_00065G01570',
'e_value' => '0.0',
'bit_score' => '1308',
'alignment_length' => '909',
'identity_percentage' => '67.88',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'OS03G11720' => array(
'gene_id' => 'OS03G11720',
'e_value' => '0.0',
'bit_score' => '1258',
'alignment_length' => '920',
'identity_percentage' => '66.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00109G00830' => array(
'gene_id' => 'PP00109G00830',
'e_value' => '0.0',
'bit_score' => '1146',
'alignment_length' => '945',
'identity_percentage' => '59.15',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AC00G77390' => array(
'gene_id' => 'AC00G77390',
'e_value' => '0.0',
'bit_score' => '879',
'alignment_length' => '925',
'identity_percentage' => '48.54',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'VC00G110660' => array(
'gene_id' => 'VC00G110660',
'e_value' => '0.0',
'bit_score' => '865',
'alignment_length' => '939',
'identity_percentage' => '48.78',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CV00G24690' => array(
'gene_id' => 'CV00G24690',
'e_value' => '0.0',
'bit_score' => '856',
'alignment_length' => '933',
'identity_percentage' => '48.77',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'PI00G24040' => array(
'gene_id' => 'PI00G24040',
'e_value' => '0.0',
'bit_score' => '852',
'alignment_length' => '938',
'identity_percentage' => '47.33',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0269154' => array(
'gene_id' => 'DDB_G0269154',
'e_value' => '0.0',
'bit_score' => '847',
'alignment_length' => '979',
'identity_percentage' => '45.45',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.04g01620' => array(
'gene_id' => 'RCC4223.04g01620',
'e_value' => '0.0',
'bit_score' => '845',
'alignment_length' => '942',
'identity_percentage' => '46.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_08G05390' => array(
'gene_id' => 'MRCC299_08G05390',
'e_value' => '0.0',
'bit_score' => '833',
'alignment_length' => '949',
'identity_percentage' => '46.58',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'CR03G10710' => array(
'gene_id' => 'CR03G10710',
'e_value' => '0.0',
'bit_score' => '831',
'alignment_length' => '920',
'identity_percentage' => '49.13',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OM_16G01380' => array(
'gene_id' => 'OM_16G01380',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '983',
'identity_percentage' => '44.25',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OT_08G02830' => array(
'gene_id' => 'OT_08G02830',
'e_value' => '0.0',
'bit_score' => '818',
'alignment_length' => '957',
'identity_percentage' => '44.62',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OL08G02650' => array(
'gene_id' => 'OL08G02650',
'e_value' => '0.0',
'bit_score' => '806',
'alignment_length' => '845',
'identity_percentage' => '48.52',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000071650' => array(
'gene_id' => 'ENSMUSG00000071650',
'e_value' => '0.0',
'bit_score' => '798',
'alignment_length' => '976',
'identity_percentage' => '43.24',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100017g38' => array(
'gene_id' => 'Naga_100017g38',
'e_value' => '0.0',
'bit_score' => '797',
'alignment_length' => '738',
'identity_percentage' => '52.03',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'MP05G06760' => array(
'gene_id' => 'MP05G06760',
'e_value' => '0.0',
'bit_score' => '796',
'alignment_length' => '1019',
'identity_percentage' => '43.47',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'FC002G01800' => array(
'gene_id' => 'FC002G01800',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '801',
'identity_percentage' => '48.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000062646' => array(
'gene_id' => 'ENSMUSG00000062646',
'e_value' => '0.0',
'bit_score' => '771',
'alignment_length' => '935',
'identity_percentage' => '42.14',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000214013' => array(
'gene_id' => 'ENSG00000214013',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '937',
'identity_percentage' => '42.90',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_01G07160' => array(
'gene_id' => 'BPRRCC1105_01G07160',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '941',
'identity_percentage' => '45.16',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'ccr158380' => array(
'gene_id' => 'ccr158380',
'e_value' => '0.0',
'bit_score' => '751',
'alignment_length' => '763',
'identity_percentage' => '49.41',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00009583' => array(
'gene_id' => 'WBGene00009583',
'e_value' => '0.0',
'bit_score' => '736',
'alignment_length' => '945',
'identity_percentage' => '41.16',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'PTI_05G01610' => array(
'gene_id' => 'PTI_05G01610',
'e_value' => '0.0',
'bit_score' => '741',
'alignment_length' => '786',
'identity_percentage' => '47.07',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'TP07G02080' => array(
'gene_id' => 'TP07G02080',
'e_value' => '0.0',
'bit_score' => '733',
'alignment_length' => '748',
'identity_percentage' => '49.33',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0027588' => array(
'gene_id' => 'FBgn0027588',
'e_value' => '0.0',
'bit_score' => '725',
'alignment_length' => '971',
'identity_percentage' => '39.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'emh160400' => array(
'gene_id' => 'emh160400',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh626580' => array(
'gene_id' => 'emh626580',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00018682' => array(
'gene_id' => 'WBGene00018682',
'e_value' => '0.0',
'bit_score' => '722',
'alignment_length' => '880',
'identity_percentage' => '42.84',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'phs303660' => array(
'gene_id' => 'phs303660',
'e_value' => '0.0',
'bit_score' => '724',
'alignment_length' => '990',
'identity_percentage' => '42.42',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G07800' => array(
'gene_id' => 'HE0000G07800',
'e_value' => '0.0',
'bit_score' => '685',
'alignment_length' => '791',
'identity_percentage' => '46.65',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'AA0001G01930' => array(
'gene_id' => 'AA0001G01930',
'e_value' => '0.0',
'bit_score' => '701',
'alignment_length' => '668',
'identity_percentage' => '51.65',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'AP00G19080' => array(
'gene_id' => 'AP00G19080',
'e_value' => '0.0',
'bit_score' => '669',
'alignment_length' => '660',
'identity_percentage' => '51.82',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'SPAC1002.03c' => array(
'gene_id' => 'SPAC1002.03c',
'e_value' => '0.0',
'bit_score' => '650',
'alignment_length' => '880',
'identity_percentage' => '39.66',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'gsu126010' => array(
'gene_id' => 'gsu126010',
'e_value' => '0.0',
'bit_score' => '637',
'alignment_length' => '922',
'identity_percentage' => '38.07',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CM13G00820' => array(
'gene_id' => 'CM13G00820',
'e_value' => '0.0',
'bit_score' => '600',
'alignment_length' => '987',
'identity_percentage' => '37.18',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'YBR229C' => array(
'gene_id' => 'YBR229C',
'e_value' => '0.0',
'bit_score' => '560',
'alignment_length' => '980',
'identity_percentage' => '34.08',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
[maximum depth reached]
)
),
'ES0080G00420' => array(
'gene_id' => 'ES0080G00420',
'e_value' => '9e-177',
'bit_score' => '530',
'alignment_length' => '572',
'identity_percentage' => '46.68',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_08G02600' => array(
'gene_id' => 'ORCC809_08G02600',
'e_value' => '4e-152',
'bit_score' => '484',
'alignment_length' => '406',
'identity_percentage' => '57.39',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'emh472720' => array(
'gene_id' => 'emh472720',
'e_value' => '1e-131',
'bit_score' => '427',
'alignment_length' => '642',
'identity_percentage' => '38.63',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'PP00242G00250' => array(
'gene_id' => 'PP00242G00250',
'e_value' => '5e-107',
'bit_score' => '361',
'alignment_length' => '496',
'identity_percentage' => '39.72',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00005G01250' => array(
'gene_id' => 'PP00005G01250',
'e_value' => '2e-102',
'bit_score' => '350',
'alignment_length' => '581',
'identity_percentage' => '36.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00041G01080' => array(
'gene_id' => 'PP00041G01080',
'e_value' => '5e-102',
'bit_score' => '349',
'alignment_length' => '496',
'identity_percentage' => '38.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00140G00390' => array(
'gene_id' => 'PP00140G00390',
'e_value' => '1e-101',
'bit_score' => '346',
'alignment_length' => '496',
'identity_percentage' => '37.90',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT3G23640' => array(
'gene_id' => 'AT3G23640',
'e_value' => '1e-97',
'bit_score' => '335',
'alignment_length' => '586',
'identity_percentage' => '34.98',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'OS06G46340' => array(
'gene_id' => 'OS06G46340',
'e_value' => '3e-95',
'bit_score' => '326',
'alignment_length' => '608',
'identity_percentage' => '35.20',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'DDB_G0269790' => array(
'gene_id' => 'DDB_G0269790',
'e_value' => '1e-94',
'bit_score' => '324',
'alignment_length' => '772',
'identity_percentage' => '29.79',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
[maximum depth reached]
)
),
'PP00060G00720' => array(
'gene_id' => 'PP00060G00720',
'e_value' => '2e-94',
'bit_score' => '326',
'alignment_length' => '522',
'identity_percentage' => '36.02',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS07G23944' => array(
'gene_id' => 'OS07G23944',
'e_value' => '5e-93',
'bit_score' => '322',
'alignment_length' => '615',
'identity_percentage' => '33.82',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00048G01310' => array(
'gene_id' => 'ATR_00048G01310',
'e_value' => '6e-93',
'bit_score' => '323',
'alignment_length' => '495',
'identity_percentage' => '36.36',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'PP00157G00350' => array(
'gene_id' => 'PP00157G00350',
'e_value' => '2e-92',
'bit_score' => '319',
'alignment_length' => '726',
'identity_percentage' => '31.82',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS07G23880' => array(
'gene_id' => 'OS07G23880',
'e_value' => '3e-92',
'bit_score' => '321',
'alignment_length' => '572',
'identity_percentage' => '35.14',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'AT5G11720' => array(
'gene_id' => 'AT5G11720',
'e_value' => '1e-90',
'bit_score' => '314',
'alignment_length' => '859',
'identity_percentage' => '29.57',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'OS06G46284' => array(
'gene_id' => 'OS06G46284',
'e_value' => '1e-90',
'bit_score' => '313',
'alignment_length' => '607',
'identity_percentage' => '34.27',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'phs293220' => array(
'gene_id' => 'phs293220',
'e_value' => '8e-90',
'bit_score' => '311',
'alignment_length' => '667',
'identity_percentage' => '31.33',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00092G00960' => array(
'gene_id' => 'ATR_00092G00960',
'e_value' => '2e-89',
'bit_score' => '310',
'alignment_length' => '657',
'identity_percentage' => '31.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'phs293240' => array(
'gene_id' => 'phs293240',
'e_value' => '2e-89',
'bit_score' => '314',
'alignment_length' => '682',
'identity_percentage' => '31.09',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00079G00110' => array(
'gene_id' => 'ATR_00079G00110',
'e_value' => '2e-89',
'bit_score' => '307',
'alignment_length' => '705',
'identity_percentage' => '31.91',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'PP00264G00160' => array(
'gene_id' => 'PP00264G00160',
'e_value' => '9e-87',
'bit_score' => '303',
'alignment_length' => '736',
'identity_percentage' => '30.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00011G01860' => array(
'gene_id' => 'PP00011G01860',
'e_value' => '1e-86',
'bit_score' => '303',
'alignment_length' => '760',
'identity_percentage' => '30.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT3G45940' => array(
'gene_id' => 'AT3G45940',
'e_value' => '1e-86',
'bit_score' => '302',
'alignment_length' => '862',
'identity_percentage' => '28.89',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'PP00013G02430' => array(
'gene_id' => 'PP00013G02430',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '716',
'identity_percentage' => '30.31',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00264G00120' => array(
'gene_id' => 'PP00264G00120',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '746',
'identity_percentage' => '29.62',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00080G01120' => array(
'gene_id' => 'PP00080G01120',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '765',
'identity_percentage' => '30.07',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00025G00520' => array(
'gene_id' => 'PP00025G00520',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '740',
'identity_percentage' => '29.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'OS01G03950' => array(
'gene_id' => 'OS01G03950',
'e_value' => '1e-83',
'bit_score' => '295',
'alignment_length' => '706',
'identity_percentage' => '30.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00086G00660' => array(
'gene_id' => 'PP00086G00660',
'e_value' => '1e-83',
'bit_score' => '293',
'alignment_length' => '706',
'identity_percentage' => '30.03',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00119G00640' => array(
'gene_id' => 'PP00119G00640',
'e_value' => '2e-82',
'bit_score' => '291',
'alignment_length' => '729',
'identity_percentage' => '29.36',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AT1G68560' => array(
'gene_id' => 'AT1G68560',
'e_value' => '2e-81',
'bit_score' => '288',
'alignment_length' => '903',
'identity_percentage' => '27.13',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'PP00006G00120' => array(
'gene_id' => 'PP00006G00120',
'e_value' => '2e-80',
'bit_score' => '285',
'alignment_length' => '723',
'identity_percentage' => '28.49',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_025G00750' => array(
'gene_id' => 'CNC64A_025G00750',
'e_value' => '2e-80',
'bit_score' => '276',
'alignment_length' => '384',
'identity_percentage' => '44.53',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'PP00245G00510' => array(
'gene_id' => 'PP00245G00510',
'e_value' => '4e-79',
'bit_score' => '281',
'alignment_length' => '747',
'identity_percentage' => '28.78',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PP00043G00100' => array(
'gene_id' => 'PP00043G00100',
'e_value' => '5e-78',
'bit_score' => '278',
'alignment_length' => '655',
'identity_percentage' => '30.69',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'AC00G97780' => array(
'gene_id' => 'AC00G97780',
'e_value' => '9e-78',
'bit_score' => '277',
'alignment_length' => '586',
'identity_percentage' => '33.28',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'AP00G35250' => array(
'gene_id' => 'AP00G35250',
'e_value' => '1e-77',
'bit_score' => '279',
'alignment_length' => '519',
'identity_percentage' => '34.87',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000068587' => array(
'gene_id' => 'ENSMUSG00000068587',
'e_value' => '2e-77',
'bit_score' => '282',
'alignment_length' => '935',
'identity_percentage' => '28.02',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00079G00080' => array(
'gene_id' => 'ATR_00079G00080',
'e_value' => '1e-76',
'bit_score' => '269',
'alignment_length' => '565',
'identity_percentage' => '32.57',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'AC00G02390' => array(
'gene_id' => 'AC00G02390',
'e_value' => '2e-75',
'bit_score' => '265',
'alignment_length' => '555',
'identity_percentage' => '31.17',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000027790' => array(
'gene_id' => 'ENSMUSG00000027790',
'e_value' => '8e-75',
'bit_score' => '274',
'alignment_length' => '650',
'identity_percentage' => '31.38',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000257335' => array(
'gene_id' => 'ENSG00000257335',
'e_value' => '4e-74',
'bit_score' => '273',
'alignment_length' => '846',
'identity_percentage' => '28.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000090402' => array(
'gene_id' => 'ENSG00000090402',
'e_value' => '4e-70',
'bit_score' => '260',
'alignment_length' => '836',
'identity_percentage' => '29.19',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000278563' => array(
'gene_id' => 'ENSG00000278563',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000257743' => array(
'gene_id' => 'ENSG00000257743',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'pte388210' => array(
'gene_id' => 'pte388210',
'e_value' => '3e-67',
'bit_score' => '245',
'alignment_length' => '645',
'identity_percentage' => '27.60',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte323710' => array(
'gene_id' => 'pte323710',
'e_value' => '3e-66',
'bit_score' => '243',
'alignment_length' => '655',
'identity_percentage' => '26.72',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte374950' => array(
'gene_id' => 'pte374950',
'e_value' => '2e-65',
'bit_score' => '240',
'alignment_length' => '648',
'identity_percentage' => '27.47',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_008G02740' => array(
'gene_id' => 'CNC64A_008G02740',
'e_value' => '2e-65',
'bit_score' => '244',
'alignment_length' => '634',
'identity_percentage' => '30.91',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'CV00G66180' => array(
'gene_id' => 'CV00G66180',
'e_value' => '5e-64',
'bit_score' => '237',
'alignment_length' => '743',
'identity_percentage' => '25.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CV00G87890' => array(
'gene_id' => 'CV00G87890',
'e_value' => '3e-62',
'bit_score' => '231',
'alignment_length' => '629',
'identity_percentage' => '26.55',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00017071' => array(
'gene_id' => 'WBGene00017071',
'e_value' => '5e-62',
'bit_score' => '231',
'alignment_length' => '684',
'identity_percentage' => '28.22',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'pte268290' => array(
'gene_id' => 'pte268290',
'e_value' => '2e-60',
'bit_score' => '225',
'alignment_length' => '593',
'identity_percentage' => '28.16',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'pte186640' => array(
'gene_id' => 'pte186640',
'e_value' => '1e-57',
'bit_score' => '217',
'alignment_length' => '598',
'identity_percentage' => '27.26',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.199g00040' => array(
'gene_id' => 'RCC4223.199g00040',
'e_value' => '3e-56',
'bit_score' => '212',
'alignment_length' => '497',
'identity_percentage' => '30.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'CV00G66200' => array(
'gene_id' => 'CV00G66200',
'e_value' => '6e-56',
'bit_score' => '209',
'alignment_length' => '659',
'identity_percentage' => '27.01',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'pte70280' => array(
'gene_id' => 'pte70280',
'e_value' => '3e-50',
'bit_score' => '194',
'alignment_length' => '678',
'identity_percentage' => '26.55',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_019G00790' => array(
'gene_id' => 'CNC64A_019G00790',
'e_value' => '2e-49',
'bit_score' => '183',
'alignment_length' => '345',
'identity_percentage' => '33.33',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'SPAC1039.11c' => array(
'gene_id' => 'SPAC1039.11c',
'e_value' => '3e-49',
'bit_score' => '193',
'alignment_length' => '298',
'identity_percentage' => '37.58',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'SPAC30D11.01c' => array(
'gene_id' => 'SPAC30D11.01c',
'e_value' => '9e-48',
'bit_score' => '188',
'alignment_length' => '352',
'identity_percentage' => '33.81',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'PP00281G00070' => array(
'gene_id' => 'PP00281G00070',
'e_value' => '3e-47',
'bit_score' => '181',
'alignment_length' => '501',
'identity_percentage' => '28.54',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'SPAPB24D3.10c' => array(
'gene_id' => 'SPAPB24D3.10c',
'e_value' => '3e-47',
'bit_score' => '187',
'alignment_length' => '360',
'identity_percentage' => '33.06',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
[maximum depth reached]
)
),
'pte180100' => array(
'gene_id' => 'pte180100',
'e_value' => '6e-47',
'bit_score' => '185',
'alignment_length' => '734',
'identity_percentage' => '26.57',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'WBGene00019895' => array(
'gene_id' => 'WBGene00019895',
'e_value' => '2e-45',
'bit_score' => '181',
'alignment_length' => '683',
'identity_percentage' => '25.92',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
[maximum depth reached]
)
),
'phs92320' => array(
'gene_id' => 'phs92320',
'e_value' => '8e-45',
'bit_score' => '179',
'alignment_length' => '332',
'identity_percentage' => '34.34',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'gsu139510' => array(
'gene_id' => 'gsu139510',
'e_value' => '2e-42',
'bit_score' => '171',
'alignment_length' => '475',
'identity_percentage' => '27.16',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CV00G74030' => array(
'gene_id' => 'CV00G74030',
'e_value' => '2e-41',
'bit_score' => '169',
'alignment_length' => '291',
'identity_percentage' => '34.71',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'HE0000G25410' => array(
'gene_id' => 'HE0000G25410',
'e_value' => '9e-41',
'bit_score' => '164',
'alignment_length' => '451',
'identity_percentage' => '27.94',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
[maximum depth reached]
)
),
'CV00G33310' => array(
'gene_id' => 'CV00G33310',
'e_value' => '3e-39',
'bit_score' => '162',
'alignment_length' => '359',
'identity_percentage' => '30.92',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'emh746930' => array(
'gene_id' => 'emh746930',
'e_value' => '2e-38',
'bit_score' => '159',
'alignment_length' => '352',
'identity_percentage' => '32.39',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh564800' => array(
'gene_id' => 'emh564800',
'e_value' => '3e-37',
'bit_score' => '155',
'alignment_length' => '352',
'identity_percentage' => '32.10',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh552990' => array(
'gene_id' => 'emh552990',
'e_value' => '4e-37',
'bit_score' => '154',
'alignment_length' => '511',
'identity_percentage' => '27.79',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'phs71110' => array(
'gene_id' => 'phs71110',
'e_value' => '6e-33',
'bit_score' => '141',
'alignment_length' => '398',
'identity_percentage' => '29.90',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'CR03G11570' => array(
'gene_id' => 'CR03G11570',
'e_value' => '1e-32',
'bit_score' => '141',
'alignment_length' => '263',
'identity_percentage' => '33.46',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'CM06G01210' => array(
'gene_id' => 'CM06G01210',
'e_value' => '1e-27',
'bit_score' => '125',
'alignment_length' => '470',
'identity_percentage' => '26.38',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'gsu63580' => array(
'gene_id' => 'gsu63580',
'e_value' => '4e-27',
'bit_score' => '122',
'alignment_length' => '561',
'identity_percentage' => '22.82',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100114g11' => array(
'gene_id' => 'Naga_100114g11',
'e_value' => '2e-24',
'bit_score' => '114',
'alignment_length' => '434',
'identity_percentage' => '25.81',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_288G00010' => array(
'gene_id' => 'CNC64A_288G00010',
'e_value' => '7e-24',
'bit_score' => '106',
'alignment_length' => '193',
'identity_percentage' => '36.27',
'gf' => array(
[maximum depth reached]
)
),
'phs71090' => array(
'gene_id' => 'phs71090',
'e_value' => '4e-23',
'bit_score' => '107',
'alignment_length' => '260',
'identity_percentage' => '26.92',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'MP05G04870' => array(
'gene_id' => 'MP05G04870',
'e_value' => '2e-22',
'bit_score' => '107',
'alignment_length' => '398',
'identity_percentage' => '25.63',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'OT_04G02420' => array(
'gene_id' => 'OT_04G02420',
'e_value' => '1e-21',
'bit_score' => '104',
'alignment_length' => '372',
'identity_percentage' => '26.61',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'MP08G03280' => array(
'gene_id' => 'MP08G03280',
'e_value' => '7e-21',
'bit_score' => '102',
'alignment_length' => '440',
'identity_percentage' => '25.91',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_04G02780' => array(
'gene_id' => 'ORCC809_04G02780',
'e_value' => '9e-21',
'bit_score' => '100',
'alignment_length' => '408',
'identity_percentage' => '25.25',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'OT_08G03880' => array(
'gene_id' => 'OT_08G03880',
'e_value' => '2e-20',
'bit_score' => '101',
'alignment_length' => '357',
'identity_percentage' => '24.65',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'OM_16G02430' => array(
'gene_id' => 'OM_16G02430',
'e_value' => '3e-20',
'bit_score' => '100',
'alignment_length' => '362',
'identity_percentage' => '25.97',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OL04G02410' => array(
'gene_id' => 'OL04G02410',
'e_value' => '6e-20',
'bit_score' => '97.4',
'alignment_length' => '405',
'identity_percentage' => '24.69',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_11G02870' => array(
'gene_id' => 'MRCC299_11G02870',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '413',
'identity_percentage' => '27.60',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'emh123040' => array(
'gene_id' => 'emh123040',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '216',
'identity_percentage' => '31.94',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh362880' => array(
'gene_id' => 'emh362880',
'e_value' => '2e-19',
'bit_score' => '98.2',
'alignment_length' => '190',
'identity_percentage' => '33.16',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'gsu137050' => array(
'gene_id' => 'gsu137050',
'e_value' => '2e-19',
'bit_score' => '97.8',
'alignment_length' => '390',
'identity_percentage' => '24.62',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'gsu133460' => array(
'gene_id' => 'gsu133460',
'e_value' => '2e-18',
'bit_score' => '91.7',
'alignment_length' => '255',
'identity_percentage' => '27.84',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'PP00041G01100' => array(
'gene_id' => 'PP00041G01100',
'e_value' => '6e-18',
'bit_score' => '93.6',
'alignment_length' => '499',
'identity_percentage' => '24.05',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_06G04670' => array(
'gene_id' => 'BPRRCC1105_06G04670',
'e_value' => '7e-18',
'bit_score' => '93.2',
'alignment_length' => '398',
'identity_percentage' => '24.87',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_08G03350' => array(
'gene_id' => 'MRCC299_08G03350',
'e_value' => '1e-17',
'bit_score' => '92.0',
'alignment_length' => '403',
'identity_percentage' => '25.56',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_12G00530' => array(
'gene_id' => 'ORCC809_12G00530',
'e_value' => '1e-17',
'bit_score' => '92.4',
'alignment_length' => '368',
'identity_percentage' => '26.36',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_034G00570' => array(
'gene_id' => 'CNC64A_034G00570',
'e_value' => '1e-17',
'bit_score' => '84.7',
'alignment_length' => '79',
'identity_percentage' => '49.37',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'OL08G03830' => array(
'gene_id' => 'OL08G03830',
'e_value' => '2e-17',
'bit_score' => '90.9',
'alignment_length' => '572',
'identity_percentage' => '22.73',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0261575' => array(
'gene_id' => 'FBgn0261575',
'e_value' => '5e-17',
'bit_score' => '90.1',
'alignment_length' => '379',
'identity_percentage' => '24.80',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_05G02990' => array(
'gene_id' => 'ORCC809_05G02990',
'e_value' => '5e-17',
'bit_score' => '90.5',
'alignment_length' => '213',
'identity_percentage' => '31.92',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'OL05G03060' => array(
'gene_id' => 'OL05G03060',
'e_value' => '6e-17',
'bit_score' => '89.4',
'alignment_length' => '387',
'identity_percentage' => '28.68',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'CV00G34570' => array(
'gene_id' => 'CV00G34570',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'OM_02G02640' => array(
'gene_id' => 'OM_02G02640',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '368',
'identity_percentage' => '25.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000046312' => array(
'gene_id' => 'ENSMUSG00000046312',
'e_value' => '8e-17',
'bit_score' => '89.4',
'alignment_length' => '398',
'identity_percentage' => '24.12',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.09g03870' => array(
'gene_id' => 'RCC4223.09g03870',
'e_value' => '4e-16',
'bit_score' => '87.4',
'alignment_length' => '198',
'identity_percentage' => '33.33',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000164976' => array(
'gene_id' => 'ENSG00000164976',
'e_value' => '5e-16',
'bit_score' => '87.0',
'alignment_length' => '395',
'identity_percentage' => '23.80',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'OM_03G03260' => array(
'gene_id' => 'OM_03G03260',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '207',
'identity_percentage' => '31.40',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_01G05990' => array(
'gene_id' => 'BPRRCC1105_01G05990',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '353',
'identity_percentage' => '23.51',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'PI00G61580' => array(
'gene_id' => 'PI00G61580',
'e_value' => '3e-15',
'bit_score' => '84.7',
'alignment_length' => '198',
'identity_percentage' => '32.83',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00095G00110' => array(
'gene_id' => 'ATR_00095G00110',
'e_value' => '5e-14',
'bit_score' => '80.5',
'alignment_length' => '461',
'identity_percentage' => '22.34',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_034G00560' => array(
'gene_id' => 'CNC64A_034G00560',
'e_value' => '5e-13',
'bit_score' => '76.6',
'alignment_length' => '343',
'identity_percentage' => '23.03',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'PP00065G00350' => array(
'gene_id' => 'PP00065G00350',
'e_value' => '1e-12',
'bit_score' => '75.1',
'alignment_length' => '311',
'identity_percentage' => '21.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'FC006G00220' => array(
'gene_id' => 'FC006G00220',
'e_value' => '1e-12',
'bit_score' => '76.3',
'alignment_length' => '314',
'identity_percentage' => '25.16',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_529G00010' => array(
'gene_id' => 'CNC64A_529G00010',
'e_value' => '2e-12',
'bit_score' => '70.5',
'alignment_length' => '89',
'identity_percentage' => '41.57',
'gf' => array(
[maximum depth reached]
)
),
'OT_05G03110' => array(
'gene_id' => 'OT_05G03110',
'e_value' => '2e-11',
'bit_score' => '72.0',
'alignment_length' => '216',
'identity_percentage' => '29.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'CM13G02020' => array(
'gene_id' => 'CM13G02020',
'e_value' => '8e-10',
'bit_score' => '67.0',
'alignment_length' => '218',
'identity_percentage' => '26.61',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0053080' => array(
'gene_id' => 'FBgn0053080',
'e_value' => '1e-09',
'bit_score' => '66.6',
'alignment_length' => '400',
'identity_percentage' => '22.50',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'emh755690' => array(
'gene_id' => 'emh755690',
'e_value' => '2e-09',
'bit_score' => '65.5',
'alignment_length' => '232',
'identity_percentage' => '26.29',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'MP02G01920' => array(
'gene_id' => 'MP02G01920',
'e_value' => '3e-09',
'bit_score' => '65.1',
'alignment_length' => '223',
'identity_percentage' => '26.46',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'pte584840' => array(
'gene_id' => 'pte584840',
'e_value' => '2e-08',
'bit_score' => '62.4',
'alignment_length' => '495',
'identity_percentage' => '18.59',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
[maximum depth reached]
)
),
'emh344740' => array(
'gene_id' => 'emh344740',
'e_value' => '4e-08',
'bit_score' => '61.2',
'alignment_length' => '304',
'identity_percentage' => '23.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ccr117820' => array(
'gene_id' => 'ccr117820',
'e_value' => '1e-07',
'bit_score' => '59.7',
'alignment_length' => '423',
'identity_percentage' => '23.64',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'AA0007G01760' => array(
'gene_id' => 'AA0007G01760',
'e_value' => '4e-07',
'bit_score' => '58.2',
'alignment_length' => '411',
'identity_percentage' => '23.36',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
)
),
'similarity_hits_species' => array(
'ath' => array(
(int) 0 => 'AT5G63840',
(int) 1 => 'AT3G23640',
(int) 2 => 'AT5G11720',
(int) 3 => 'AT3G45940',
(int) 4 => 'AT1G68560'
),
'atr' => array(
(int) 0 => 'ATR_00065G01570',
(int) 1 => 'ATR_00048G01310',
(int) 2 => 'ATR_00092G00960',
(int) 3 => 'ATR_00079G00110',
(int) 4 => 'ATR_00079G00080',
(int) 5 => 'ATR_00095G00110'
),
'osa' => array(
(int) 0 => 'OS03G11720',
(int) 1 => 'OS06G46340',
(int) 2 => 'OS07G23944',
(int) 3 => 'OS07G23880',
(int) 4 => 'OS06G46284',
(int) 5 => 'OS01G03950'
),
'ppa' => array(
(int) 0 => 'PP00109G00830',
(int) 1 => 'PP00242G00250',
(int) 2 => 'PP00005G01250',
(int) 3 => 'PP00041G01080',
(int) 4 => 'PP00140G00390',
(int) 5 => 'PP00060G00720',
(int) 6 => 'PP00157G00350',
(int) 7 => 'PP00264G00160',
(int) 8 => 'PP00011G01860',
(int) 9 => 'PP00013G02430',
(int) 10 => 'PP00264G00120',
(int) 11 => 'PP00080G01120',
(int) 12 => 'PP00025G00520',
(int) 13 => 'PP00086G00660',
(int) 14 => 'PP00119G00640',
(int) 15 => 'PP00006G00120',
(int) 16 => 'PP00245G00510',
(int) 17 => 'PP00043G00100',
(int) 18 => 'PP00281G00070',
(int) 19 => 'PP00041G01100',
(int) 20 => 'PP00065G00350'
),
'acg' => array(
(int) 0 => 'AC00G77390',
(int) 1 => 'AC00G97780',
(int) 2 => 'AC00G02390'
),
'vca' => array(
(int) 0 => 'VC00G110660'
),
'cvu' => array(
(int) 0 => 'CV00G24690',
(int) 1 => 'CV00G66180',
(int) 2 => 'CV00G87890',
(int) 3 => 'CV00G66200',
(int) 4 => 'CV00G74030',
(int) 5 => 'CV00G33310',
(int) 6 => 'CV00G34570'
),
'pse3' => array(
(int) 0 => 'PI00G24040',
(int) 1 => 'PI00G61580'
),
'ddi' => array(
(int) 0 => 'DDB_G0269154',
(int) 1 => 'DDB_G0269790'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g01620',
(int) 1 => 'RCC4223.199g00040',
(int) 2 => 'RCC4223.09g03870'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_08G05390',
(int) 1 => 'MRCC299_11G02870',
(int) 2 => 'MRCC299_08G03350'
),
'cre' => array(
(int) 0 => 'CR03G10710',
(int) 1 => 'CR03G11570'
),
'ome' => array(
(int) 0 => 'OM_16G01380',
(int) 1 => 'OM_16G02430',
(int) 2 => 'OM_02G02640',
(int) 3 => 'OM_03G03260'
),
'ota' => array(
(int) 0 => 'OT_08G02830',
(int) 1 => 'OT_04G02420',
(int) 2 => 'OT_08G03880',
(int) 3 => 'OT_05G03110'
),
'olu' => array(
(int) 0 => 'OL08G02650',
(int) 1 => 'OL04G02410',
(int) 2 => 'OL08G03830',
(int) 3 => 'OL05G03060'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000071650',
(int) 1 => 'ENSMUSG00000062646',
(int) 2 => 'ENSMUSG00000068587',
(int) 3 => 'ENSMUSG00000027790',
(int) 4 => 'ENSMUSG00000046312'
),
'nga' => array(
(int) 0 => 'Naga_100017g38',
(int) 1 => 'Naga_100114g11'
),
'mpu' => array(
(int) 0 => 'MP05G06760',
(int) 1 => 'MP05G04870',
(int) 2 => 'MP08G03280',
(int) 3 => 'MP02G01920'
),
'fcy' => array(
(int) 0 => 'FC002G01800',
(int) 1 => 'FC006G00220'
),
'hom' => array(
(int) 0 => 'ENSG00000214013',
(int) 1 => 'ENSG00000257335',
(int) 2 => 'ENSG00000090402',
(int) 3 => 'ENSG00000278563',
(int) 4 => 'ENSG00000257743',
(int) 5 => 'ENSG00000164976'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_01G07160',
(int) 1 => 'BPRRCC1105_06G04670',
(int) 2 => 'BPRRCC1105_01G05990'
),
'ccr' => array(
(int) 0 => 'ccr158380',
(int) 1 => 'ccr117820'
),
'cel' => array(
(int) 0 => 'WBGene00009583',
(int) 1 => 'WBGene00018682',
(int) 2 => 'WBGene00017071',
(int) 3 => 'WBGene00019895'
),
'ptri' => array(
(int) 0 => 'PTI_05G01610'
),
'tps' => array(
(int) 0 => 'TP07G02080'
),
'drm' => array(
(int) 0 => 'FBgn0027588',
(int) 1 => 'FBgn0261575',
(int) 2 => 'FBgn0053080'
),
'emh' => array(
(int) 0 => 'emh160400',
(int) 1 => 'emh626580',
(int) 2 => 'emh472720',
(int) 3 => 'emh746930',
(int) 4 => 'emh564800',
(int) 5 => 'emh552990',
(int) 6 => 'emh123040',
(int) 7 => 'emh362880',
(int) 8 => 'emh755690',
(int) 9 => 'emh344740'
),
'phs' => array(
(int) 0 => 'phs303660',
(int) 1 => 'phs293220',
(int) 2 => 'phs293240',
(int) 3 => 'phs92320',
(int) 4 => 'phs71110',
(int) 5 => 'phs71090'
),
'hsp' => array(
(int) 0 => 'HE0000G07800',
(int) 1 => 'HE0000G25410'
),
'aan' => array(
(int) 0 => 'AA0001G01930',
(int) 1 => 'AA0007G01760'
),
'apr' => array(
(int) 0 => 'AP00G19080',
(int) 1 => 'AP00G35250'
),
'scp' => array(
(int) 0 => 'SPAC1002.03c',
(int) 1 => 'SPAC1039.11c',
(int) 2 => 'SPAC30D11.01c',
(int) 3 => 'SPAPB24D3.10c'
),
'gsu' => array(
(int) 0 => 'gsu126010',
(int) 1 => 'gsu139510',
(int) 2 => 'gsu63580',
(int) 3 => 'gsu137050',
(int) 4 => 'gsu133460'
),
'cme' => array(
(int) 0 => 'CM13G00820',
(int) 1 => 'CM06G01210',
(int) 2 => 'CM13G02020'
),
'sac' => array(
(int) 0 => 'YBR229C'
),
'esi' => array(
(int) 0 => 'ES0080G00420'
),
'orcc809' => array(
(int) 0 => 'ORCC809_08G02600',
(int) 1 => 'ORCC809_04G02780',
(int) 2 => 'ORCC809_12G00530',
(int) 3 => 'ORCC809_05G02990'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_025G00750',
(int) 1 => 'CNC64A_008G02740',
(int) 2 => 'CNC64A_019G00790',
(int) 3 => 'CNC64A_034G00570',
(int) 4 => 'CNC64A_034G00560'
),
'pte' => array(
(int) 0 => 'pte388210',
(int) 1 => 'pte323710',
(int) 2 => 'pte374950',
(int) 3 => 'pte268290',
(int) 4 => 'pte186640',
(int) 5 => 'pte70280',
(int) 6 => 'pte180100',
(int) 7 => 'pte584840'
)
),
'gene_id' => 'AT5G63840',
'all_species_index' => array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'all_species' => array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'gene_family_types_information' => array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
),
'gene_family_types_configuration' => array(),
'data_identifier' => 'AT5G63840',
'data_type' => 'gene_id',
'allow_async_use' => true,
'gene_placeholder' => 'ES0116G00040',
'gf_placeholder' => 'HOM03P017607',
'title_for_layout' => 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
)
$allowed_extra_sequences_types = array(
'aa' => 'Protein',
'dna' => 'DNA'
)
$allowed_editing_methods = array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
)
$allowed_tree_programs = array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
)
$similarity_hits_genes = array(
'AT5G63840' => array(
'gene_id' => 'AT5G63840',
'e_value' => '0.0',
'bit_score' => '1909',
'alignment_length' => '922',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ATR_00065G01570' => array(
'gene_id' => 'ATR_00065G01570',
'e_value' => '0.0',
'bit_score' => '1308',
'alignment_length' => '909',
'identity_percentage' => '67.88',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OS03G11720' => array(
'gene_id' => 'OS03G11720',
'e_value' => '0.0',
'bit_score' => '1258',
'alignment_length' => '920',
'identity_percentage' => '66.52',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PP00109G00830' => array(
'gene_id' => 'PP00109G00830',
'e_value' => '0.0',
'bit_score' => '1146',
'alignment_length' => '945',
'identity_percentage' => '59.15',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AC00G77390' => array(
'gene_id' => 'AC00G77390',
'e_value' => '0.0',
'bit_score' => '879',
'alignment_length' => '925',
'identity_percentage' => '48.54',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'VC00G110660' => array(
'gene_id' => 'VC00G110660',
'e_value' => '0.0',
'bit_score' => '865',
'alignment_length' => '939',
'identity_percentage' => '48.78',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CV00G24690' => array(
'gene_id' => 'CV00G24690',
'e_value' => '0.0',
'bit_score' => '856',
'alignment_length' => '933',
'identity_percentage' => '48.77',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PI00G24040' => array(
'gene_id' => 'PI00G24040',
'e_value' => '0.0',
'bit_score' => '852',
'alignment_length' => '938',
'identity_percentage' => '47.33',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'DDB_G0269154' => array(
'gene_id' => 'DDB_G0269154',
'e_value' => '0.0',
'bit_score' => '847',
'alignment_length' => '979',
'identity_percentage' => '45.45',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'RCC4223.04g01620' => array(
'gene_id' => 'RCC4223.04g01620',
'e_value' => '0.0',
'bit_score' => '845',
'alignment_length' => '942',
'identity_percentage' => '46.92',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'MRCC299_08G05390' => array(
'gene_id' => 'MRCC299_08G05390',
'e_value' => '0.0',
'bit_score' => '833',
'alignment_length' => '949',
'identity_percentage' => '46.58',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CR03G10710' => array(
'gene_id' => 'CR03G10710',
'e_value' => '0.0',
'bit_score' => '831',
'alignment_length' => '920',
'identity_percentage' => '49.13',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OM_16G01380' => array(
'gene_id' => 'OM_16G01380',
'e_value' => '0.0',
'bit_score' => '822',
'alignment_length' => '983',
'identity_percentage' => '44.25',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OT_08G02830' => array(
'gene_id' => 'OT_08G02830',
'e_value' => '0.0',
'bit_score' => '818',
'alignment_length' => '957',
'identity_percentage' => '44.62',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'OL08G02650' => array(
'gene_id' => 'OL08G02650',
'e_value' => '0.0',
'bit_score' => '806',
'alignment_length' => '845',
'identity_percentage' => '48.52',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSMUSG00000071650' => array(
'gene_id' => 'ENSMUSG00000071650',
'e_value' => '0.0',
'bit_score' => '798',
'alignment_length' => '976',
'identity_percentage' => '43.24',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'Naga_100017g38' => array(
'gene_id' => 'Naga_100017g38',
'e_value' => '0.0',
'bit_score' => '797',
'alignment_length' => '738',
'identity_percentage' => '52.03',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'MP05G06760' => array(
'gene_id' => 'MP05G06760',
'e_value' => '0.0',
'bit_score' => '796',
'alignment_length' => '1019',
'identity_percentage' => '43.47',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'FC002G01800' => array(
'gene_id' => 'FC002G01800',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '801',
'identity_percentage' => '48.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSMUSG00000062646' => array(
'gene_id' => 'ENSMUSG00000062646',
'e_value' => '0.0',
'bit_score' => '771',
'alignment_length' => '935',
'identity_percentage' => '42.14',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ENSG00000214013' => array(
'gene_id' => 'ENSG00000214013',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '937',
'identity_percentage' => '42.90',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'BPRRCC1105_01G07160' => array(
'gene_id' => 'BPRRCC1105_01G07160',
'e_value' => '0.0',
'bit_score' => '767',
'alignment_length' => '941',
'identity_percentage' => '45.16',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ccr158380' => array(
'gene_id' => 'ccr158380',
'e_value' => '0.0',
'bit_score' => '751',
'alignment_length' => '763',
'identity_percentage' => '49.41',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'WBGene00009583' => array(
'gene_id' => 'WBGene00009583',
'e_value' => '0.0',
'bit_score' => '736',
'alignment_length' => '945',
'identity_percentage' => '41.16',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PTI_05G01610' => array(
'gene_id' => 'PTI_05G01610',
'e_value' => '0.0',
'bit_score' => '741',
'alignment_length' => '786',
'identity_percentage' => '47.07',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'TP07G02080' => array(
'gene_id' => 'TP07G02080',
'e_value' => '0.0',
'bit_score' => '733',
'alignment_length' => '748',
'identity_percentage' => '49.33',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'FBgn0027588' => array(
'gene_id' => 'FBgn0027588',
'e_value' => '0.0',
'bit_score' => '725',
'alignment_length' => '971',
'identity_percentage' => '39.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh160400' => array(
'gene_id' => 'emh160400',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh626580' => array(
'gene_id' => 'emh626580',
'e_value' => '0.0',
'bit_score' => '717',
'alignment_length' => '723',
'identity_percentage' => '48.82',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'WBGene00018682' => array(
'gene_id' => 'WBGene00018682',
'e_value' => '0.0',
'bit_score' => '722',
'alignment_length' => '880',
'identity_percentage' => '42.84',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'phs303660' => array(
'gene_id' => 'phs303660',
'e_value' => '0.0',
'bit_score' => '724',
'alignment_length' => '990',
'identity_percentage' => '42.42',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'HE0000G07800' => array(
'gene_id' => 'HE0000G07800',
'e_value' => '0.0',
'bit_score' => '685',
'alignment_length' => '791',
'identity_percentage' => '46.65',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AA0001G01930' => array(
'gene_id' => 'AA0001G01930',
'e_value' => '0.0',
'bit_score' => '701',
'alignment_length' => '668',
'identity_percentage' => '51.65',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'AP00G19080' => array(
'gene_id' => 'AP00G19080',
'e_value' => '0.0',
'bit_score' => '669',
'alignment_length' => '660',
'identity_percentage' => '51.82',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'SPAC1002.03c' => array(
'gene_id' => 'SPAC1002.03c',
'e_value' => '0.0',
'bit_score' => '650',
'alignment_length' => '880',
'identity_percentage' => '39.66',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'gsu126010' => array(
'gene_id' => 'gsu126010',
'e_value' => '0.0',
'bit_score' => '637',
'alignment_length' => '922',
'identity_percentage' => '38.07',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'CM13G00820' => array(
'gene_id' => 'CM13G00820',
'e_value' => '0.0',
'bit_score' => '600',
'alignment_length' => '987',
'identity_percentage' => '37.18',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'YBR229C' => array(
'gene_id' => 'YBR229C',
'e_value' => '0.0',
'bit_score' => '560',
'alignment_length' => '980',
'identity_percentage' => '34.08',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ES0080G00420' => array(
'gene_id' => 'ES0080G00420',
'e_value' => '9e-177',
'bit_score' => '530',
'alignment_length' => '572',
'identity_percentage' => '46.68',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'ORCC809_08G02600' => array(
'gene_id' => 'ORCC809_08G02600',
'e_value' => '4e-152',
'bit_score' => '484',
'alignment_length' => '406',
'identity_percentage' => '57.39',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'emh472720' => array(
'gene_id' => 'emh472720',
'e_value' => '1e-131',
'bit_score' => '427',
'alignment_length' => '642',
'identity_percentage' => '38.63',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P209776'
)
),
'PP00242G00250' => array(
'gene_id' => 'PP00242G00250',
'e_value' => '5e-107',
'bit_score' => '361',
'alignment_length' => '496',
'identity_percentage' => '39.72',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00005G01250' => array(
'gene_id' => 'PP00005G01250',
'e_value' => '2e-102',
'bit_score' => '350',
'alignment_length' => '581',
'identity_percentage' => '36.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00041G01080' => array(
'gene_id' => 'PP00041G01080',
'e_value' => '5e-102',
'bit_score' => '349',
'alignment_length' => '496',
'identity_percentage' => '38.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00140G00390' => array(
'gene_id' => 'PP00140G00390',
'e_value' => '1e-101',
'bit_score' => '346',
'alignment_length' => '496',
'identity_percentage' => '37.90',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'AT3G23640' => array(
'gene_id' => 'AT3G23640',
'e_value' => '1e-97',
'bit_score' => '335',
'alignment_length' => '586',
'identity_percentage' => '34.98',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'OS06G46340' => array(
'gene_id' => 'OS06G46340',
'e_value' => '3e-95',
'bit_score' => '326',
'alignment_length' => '608',
'identity_percentage' => '35.20',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'DDB_G0269790' => array(
'gene_id' => 'DDB_G0269790',
'e_value' => '1e-94',
'bit_score' => '324',
'alignment_length' => '772',
'identity_percentage' => '29.79',
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00060G00720' => array(
'gene_id' => 'PP00060G00720',
'e_value' => '2e-94',
'bit_score' => '326',
'alignment_length' => '522',
'identity_percentage' => '36.02',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'OS07G23944' => array(
'gene_id' => 'OS07G23944',
'e_value' => '5e-93',
'bit_score' => '322',
'alignment_length' => '615',
'identity_percentage' => '33.82',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'ATR_00048G01310' => array(
'gene_id' => 'ATR_00048G01310',
'e_value' => '6e-93',
'bit_score' => '323',
'alignment_length' => '495',
'identity_percentage' => '36.36',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'PP00157G00350' => array(
'gene_id' => 'PP00157G00350',
'e_value' => '2e-92',
'bit_score' => '319',
'alignment_length' => '726',
'identity_percentage' => '31.82',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS07G23880' => array(
'gene_id' => 'OS07G23880',
'e_value' => '3e-92',
'bit_score' => '321',
'alignment_length' => '572',
'identity_percentage' => '35.14',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P009259'
)
),
'AT5G11720' => array(
'gene_id' => 'AT5G11720',
'e_value' => '1e-90',
'bit_score' => '314',
'alignment_length' => '859',
'identity_percentage' => '29.57',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS06G46284' => array(
'gene_id' => 'OS06G46284',
'e_value' => '1e-90',
'bit_score' => '313',
'alignment_length' => '607',
'identity_percentage' => '34.27',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs293220' => array(
'gene_id' => 'phs293220',
'e_value' => '8e-90',
'bit_score' => '311',
'alignment_length' => '667',
'identity_percentage' => '31.33',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00092G00960' => array(
'gene_id' => 'ATR_00092G00960',
'e_value' => '2e-89',
'bit_score' => '310',
'alignment_length' => '657',
'identity_percentage' => '31.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs293240' => array(
'gene_id' => 'phs293240',
'e_value' => '2e-89',
'bit_score' => '314',
'alignment_length' => '682',
'identity_percentage' => '31.09',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00079G00110' => array(
'gene_id' => 'ATR_00079G00110',
'e_value' => '2e-89',
'bit_score' => '307',
'alignment_length' => '705',
'identity_percentage' => '31.91',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00264G00160' => array(
'gene_id' => 'PP00264G00160',
'e_value' => '9e-87',
'bit_score' => '303',
'alignment_length' => '736',
'identity_percentage' => '30.71',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00011G01860' => array(
'gene_id' => 'PP00011G01860',
'e_value' => '1e-86',
'bit_score' => '303',
'alignment_length' => '760',
'identity_percentage' => '30.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AT3G45940' => array(
'gene_id' => 'AT3G45940',
'e_value' => '1e-86',
'bit_score' => '302',
'alignment_length' => '862',
'identity_percentage' => '28.89',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00013G02430' => array(
'gene_id' => 'PP00013G02430',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '716',
'identity_percentage' => '30.31',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00264G00120' => array(
'gene_id' => 'PP00264G00120',
'e_value' => '2e-85',
'bit_score' => '300',
'alignment_length' => '746',
'identity_percentage' => '29.62',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00080G01120' => array(
'gene_id' => 'PP00080G01120',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '765',
'identity_percentage' => '30.07',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00025G00520' => array(
'gene_id' => 'PP00025G00520',
'e_value' => '7e-84',
'bit_score' => '295',
'alignment_length' => '740',
'identity_percentage' => '29.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'OS01G03950' => array(
'gene_id' => 'OS01G03950',
'e_value' => '1e-83',
'bit_score' => '295',
'alignment_length' => '706',
'identity_percentage' => '30.74',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00086G00660' => array(
'gene_id' => 'PP00086G00660',
'e_value' => '1e-83',
'bit_score' => '293',
'alignment_length' => '706',
'identity_percentage' => '30.03',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00119G00640' => array(
'gene_id' => 'PP00119G00640',
'e_value' => '2e-82',
'bit_score' => '291',
'alignment_length' => '729',
'identity_percentage' => '29.36',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AT1G68560' => array(
'gene_id' => 'AT1G68560',
'e_value' => '2e-81',
'bit_score' => '288',
'alignment_length' => '903',
'identity_percentage' => '27.13',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00006G00120' => array(
'gene_id' => 'PP00006G00120',
'e_value' => '2e-80',
'bit_score' => '285',
'alignment_length' => '723',
'identity_percentage' => '28.49',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CNC64A_025G00750' => array(
'gene_id' => 'CNC64A_025G00750',
'e_value' => '2e-80',
'bit_score' => '276',
'alignment_length' => '384',
'identity_percentage' => '44.53',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P001010'
)
),
'PP00245G00510' => array(
'gene_id' => 'PP00245G00510',
'e_value' => '4e-79',
'bit_score' => '281',
'alignment_length' => '747',
'identity_percentage' => '28.78',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00043G00100' => array(
'gene_id' => 'PP00043G00100',
'e_value' => '5e-78',
'bit_score' => '278',
'alignment_length' => '655',
'identity_percentage' => '30.69',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AC00G97780' => array(
'gene_id' => 'AC00G97780',
'e_value' => '9e-78',
'bit_score' => '277',
'alignment_length' => '586',
'identity_percentage' => '33.28',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AP00G35250' => array(
'gene_id' => 'AP00G35250',
'e_value' => '1e-77',
'bit_score' => '279',
'alignment_length' => '519',
'identity_percentage' => '34.87',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSMUSG00000068587' => array(
'gene_id' => 'ENSMUSG00000068587',
'e_value' => '2e-77',
'bit_score' => '282',
'alignment_length' => '935',
'identity_percentage' => '28.02',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ATR_00079G00080' => array(
'gene_id' => 'ATR_00079G00080',
'e_value' => '1e-76',
'bit_score' => '269',
'alignment_length' => '565',
'identity_percentage' => '32.57',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'AC00G02390' => array(
'gene_id' => 'AC00G02390',
'e_value' => '2e-75',
'bit_score' => '265',
'alignment_length' => '555',
'identity_percentage' => '31.17',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSMUSG00000027790' => array(
'gene_id' => 'ENSMUSG00000027790',
'e_value' => '8e-75',
'bit_score' => '274',
'alignment_length' => '650',
'identity_percentage' => '31.38',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000257335' => array(
'gene_id' => 'ENSG00000257335',
'e_value' => '4e-74',
'bit_score' => '273',
'alignment_length' => '846',
'identity_percentage' => '28.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000090402' => array(
'gene_id' => 'ENSG00000090402',
'e_value' => '4e-70',
'bit_score' => '260',
'alignment_length' => '836',
'identity_percentage' => '29.19',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000278563' => array(
'gene_id' => 'ENSG00000278563',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'ENSG00000257743' => array(
'gene_id' => 'ENSG00000257743',
'e_value' => '2e-67',
'bit_score' => '252',
'alignment_length' => '694',
'identity_percentage' => '29.25',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte388210' => array(
'gene_id' => 'pte388210',
'e_value' => '3e-67',
'bit_score' => '245',
'alignment_length' => '645',
'identity_percentage' => '27.60',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte323710' => array(
'gene_id' => 'pte323710',
'e_value' => '3e-66',
'bit_score' => '243',
'alignment_length' => '655',
'identity_percentage' => '26.72',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte374950' => array(
'gene_id' => 'pte374950',
'e_value' => '2e-65',
'bit_score' => '240',
'alignment_length' => '648',
'identity_percentage' => '27.47',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CNC64A_008G02740' => array(
'gene_id' => 'CNC64A_008G02740',
'e_value' => '2e-65',
'bit_score' => '244',
'alignment_length' => '634',
'identity_percentage' => '30.91',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G66180' => array(
'gene_id' => 'CV00G66180',
'e_value' => '5e-64',
'bit_score' => '237',
'alignment_length' => '743',
'identity_percentage' => '25.57',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G87890' => array(
'gene_id' => 'CV00G87890',
'e_value' => '3e-62',
'bit_score' => '231',
'alignment_length' => '629',
'identity_percentage' => '26.55',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'WBGene00017071' => array(
'gene_id' => 'WBGene00017071',
'e_value' => '5e-62',
'bit_score' => '231',
'alignment_length' => '684',
'identity_percentage' => '28.22',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte268290' => array(
'gene_id' => 'pte268290',
'e_value' => '2e-60',
'bit_score' => '225',
'alignment_length' => '593',
'identity_percentage' => '28.16',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte186640' => array(
'gene_id' => 'pte186640',
'e_value' => '1e-57',
'bit_score' => '217',
'alignment_length' => '598',
'identity_percentage' => '27.26',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'RCC4223.199g00040' => array(
'gene_id' => 'RCC4223.199g00040',
'e_value' => '3e-56',
'bit_score' => '212',
'alignment_length' => '497',
'identity_percentage' => '30.18',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'CV00G66200' => array(
'gene_id' => 'CV00G66200',
'e_value' => '6e-56',
'bit_score' => '209',
'alignment_length' => '659',
'identity_percentage' => '27.01',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte70280' => array(
'gene_id' => 'pte70280',
'e_value' => '3e-50',
'bit_score' => '194',
'alignment_length' => '678',
'identity_percentage' => '26.55',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P050433'
)
),
'CNC64A_019G00790' => array(
'gene_id' => 'CNC64A_019G00790',
'e_value' => '2e-49',
'bit_score' => '183',
'alignment_length' => '345',
'identity_percentage' => '33.33',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P080455'
)
),
'SPAC1039.11c' => array(
'gene_id' => 'SPAC1039.11c',
'e_value' => '3e-49',
'bit_score' => '193',
'alignment_length' => '298',
'identity_percentage' => '37.58',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'SPAC30D11.01c' => array(
'gene_id' => 'SPAC30D11.01c',
'e_value' => '9e-48',
'bit_score' => '188',
'alignment_length' => '352',
'identity_percentage' => '33.81',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'PP00281G00070' => array(
'gene_id' => 'PP00281G00070',
'e_value' => '3e-47',
'bit_score' => '181',
'alignment_length' => '501',
'identity_percentage' => '28.54',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'SPAPB24D3.10c' => array(
'gene_id' => 'SPAPB24D3.10c',
'e_value' => '3e-47',
'bit_score' => '187',
'alignment_length' => '360',
'identity_percentage' => '33.06',
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'pte180100' => array(
'gene_id' => 'pte180100',
'e_value' => '6e-47',
'bit_score' => '185',
'alignment_length' => '734',
'identity_percentage' => '26.57',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P050433'
)
),
'WBGene00019895' => array(
'gene_id' => 'WBGene00019895',
'e_value' => '2e-45',
'bit_score' => '181',
'alignment_length' => '683',
'identity_percentage' => '25.92',
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'phs92320' => array(
'gene_id' => 'phs92320',
'e_value' => '8e-45',
'bit_score' => '179',
'alignment_length' => '332',
'identity_percentage' => '34.34',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P174336'
)
),
'gsu139510' => array(
'gene_id' => 'gsu139510',
'e_value' => '2e-42',
'bit_score' => '171',
'alignment_length' => '475',
'identity_percentage' => '27.16',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'CV00G74030' => array(
'gene_id' => 'CV00G74030',
'e_value' => '2e-41',
'bit_score' => '169',
'alignment_length' => '291',
'identity_percentage' => '34.71',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'HE0000G25410' => array(
'gene_id' => 'HE0000G25410',
'e_value' => '9e-41',
'bit_score' => '164',
'alignment_length' => '451',
'identity_percentage' => '27.94',
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CV00G33310' => array(
'gene_id' => 'CV00G33310',
'e_value' => '3e-39',
'bit_score' => '162',
'alignment_length' => '359',
'identity_percentage' => '30.92',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'emh746930' => array(
'gene_id' => 'emh746930',
'e_value' => '2e-38',
'bit_score' => '159',
'alignment_length' => '352',
'identity_percentage' => '32.39',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'emh564800' => array(
'gene_id' => 'emh564800',
'e_value' => '3e-37',
'bit_score' => '155',
'alignment_length' => '352',
'identity_percentage' => '32.10',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P024786'
)
),
'emh552990' => array(
'gene_id' => 'emh552990',
'e_value' => '4e-37',
'bit_score' => '154',
'alignment_length' => '511',
'identity_percentage' => '27.79',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P201802'
)
),
'phs71110' => array(
'gene_id' => 'phs71110',
'e_value' => '6e-33',
'bit_score' => '141',
'alignment_length' => '398',
'identity_percentage' => '29.90',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P051673'
)
),
'CR03G11570' => array(
'gene_id' => 'CR03G11570',
'e_value' => '1e-32',
'bit_score' => '141',
'alignment_length' => '263',
'identity_percentage' => '33.46',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P000377'
)
),
'CM06G01210' => array(
'gene_id' => 'CM06G01210',
'e_value' => '1e-27',
'bit_score' => '125',
'alignment_length' => '470',
'identity_percentage' => '26.38',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'gsu63580' => array(
'gene_id' => 'gsu63580',
'e_value' => '4e-27',
'bit_score' => '122',
'alignment_length' => '561',
'identity_percentage' => '22.82',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'Naga_100114g11' => array(
'gene_id' => 'Naga_100114g11',
'e_value' => '2e-24',
'bit_score' => '114',
'alignment_length' => '434',
'identity_percentage' => '25.81',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_288G00010' => array(
'gene_id' => 'CNC64A_288G00010',
'e_value' => '7e-24',
'bit_score' => '106',
'alignment_length' => '193',
'identity_percentage' => '36.27',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P079153'
)
),
'phs71090' => array(
'gene_id' => 'phs71090',
'e_value' => '4e-23',
'bit_score' => '107',
'alignment_length' => '260',
'identity_percentage' => '26.92',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P104467'
)
),
'MP05G04870' => array(
'gene_id' => 'MP05G04870',
'e_value' => '2e-22',
'bit_score' => '107',
'alignment_length' => '398',
'identity_percentage' => '25.63',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OT_04G02420' => array(
'gene_id' => 'OT_04G02420',
'e_value' => '1e-21',
'bit_score' => '104',
'alignment_length' => '372',
'identity_percentage' => '26.61',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MP08G03280' => array(
'gene_id' => 'MP08G03280',
'e_value' => '7e-21',
'bit_score' => '102',
'alignment_length' => '440',
'identity_percentage' => '25.91',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ORCC809_04G02780' => array(
'gene_id' => 'ORCC809_04G02780',
'e_value' => '9e-21',
'bit_score' => '100',
'alignment_length' => '408',
'identity_percentage' => '25.25',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OT_08G03880' => array(
'gene_id' => 'OT_08G03880',
'e_value' => '2e-20',
'bit_score' => '101',
'alignment_length' => '357',
'identity_percentage' => '24.65',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OM_16G02430' => array(
'gene_id' => 'OM_16G02430',
'e_value' => '3e-20',
'bit_score' => '100',
'alignment_length' => '362',
'identity_percentage' => '25.97',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'OL04G02410' => array(
'gene_id' => 'OL04G02410',
'e_value' => '6e-20',
'bit_score' => '97.4',
'alignment_length' => '405',
'identity_percentage' => '24.69',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MRCC299_11G02870' => array(
'gene_id' => 'MRCC299_11G02870',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '413',
'identity_percentage' => '27.60',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'emh123040' => array(
'gene_id' => 'emh123040',
'e_value' => '1e-19',
'bit_score' => '99.0',
'alignment_length' => '216',
'identity_percentage' => '31.94',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P048023'
)
),
'emh362880' => array(
'gene_id' => 'emh362880',
'e_value' => '2e-19',
'bit_score' => '98.2',
'alignment_length' => '190',
'identity_percentage' => '33.16',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P048023'
)
),
'gsu137050' => array(
'gene_id' => 'gsu137050',
'e_value' => '2e-19',
'bit_score' => '97.8',
'alignment_length' => '390',
'identity_percentage' => '24.62',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'gsu133460' => array(
'gene_id' => 'gsu133460',
'e_value' => '2e-18',
'bit_score' => '91.7',
'alignment_length' => '255',
'identity_percentage' => '27.84',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'PP00041G01100' => array(
'gene_id' => 'PP00041G01100',
'e_value' => '6e-18',
'bit_score' => '93.6',
'alignment_length' => '499',
'identity_percentage' => '24.05',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'BPRRCC1105_06G04670' => array(
'gene_id' => 'BPRRCC1105_06G04670',
'e_value' => '7e-18',
'bit_score' => '93.2',
'alignment_length' => '398',
'identity_percentage' => '24.87',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'MRCC299_08G03350' => array(
'gene_id' => 'MRCC299_08G03350',
'e_value' => '1e-17',
'bit_score' => '92.0',
'alignment_length' => '403',
'identity_percentage' => '25.56',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'ORCC809_12G00530' => array(
'gene_id' => 'ORCC809_12G00530',
'e_value' => '1e-17',
'bit_score' => '92.4',
'alignment_length' => '368',
'identity_percentage' => '26.36',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_034G00570' => array(
'gene_id' => 'CNC64A_034G00570',
'e_value' => '1e-17',
'bit_score' => '84.7',
'alignment_length' => '79',
'identity_percentage' => '49.37',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P113797'
)
),
'OL08G03830' => array(
'gene_id' => 'OL08G03830',
'e_value' => '2e-17',
'bit_score' => '90.9',
'alignment_length' => '572',
'identity_percentage' => '22.73',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'FBgn0261575' => array(
'gene_id' => 'FBgn0261575',
'e_value' => '5e-17',
'bit_score' => '90.1',
'alignment_length' => '379',
'identity_percentage' => '24.80',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ORCC809_05G02990' => array(
'gene_id' => 'ORCC809_05G02990',
'e_value' => '5e-17',
'bit_score' => '90.5',
'alignment_length' => '213',
'identity_percentage' => '31.92',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OL05G03060' => array(
'gene_id' => 'OL05G03060',
'e_value' => '6e-17',
'bit_score' => '89.4',
'alignment_length' => '387',
'identity_percentage' => '28.68',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'CV00G34570' => array(
'gene_id' => 'CV00G34570',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OM_02G02640' => array(
'gene_id' => 'OM_02G02640',
'e_value' => '6e-17',
'bit_score' => '89.7',
'alignment_length' => '368',
'identity_percentage' => '25.00',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ENSMUSG00000046312' => array(
'gene_id' => 'ENSMUSG00000046312',
'e_value' => '8e-17',
'bit_score' => '89.4',
'alignment_length' => '398',
'identity_percentage' => '24.12',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'RCC4223.09g03870' => array(
'gene_id' => 'RCC4223.09g03870',
'e_value' => '4e-16',
'bit_score' => '87.4',
'alignment_length' => '198',
'identity_percentage' => '33.33',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ENSG00000164976' => array(
'gene_id' => 'ENSG00000164976',
'e_value' => '5e-16',
'bit_score' => '87.0',
'alignment_length' => '395',
'identity_percentage' => '23.80',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'OM_03G03260' => array(
'gene_id' => 'OM_03G03260',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '207',
'identity_percentage' => '31.40',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'BPRRCC1105_01G05990' => array(
'gene_id' => 'BPRRCC1105_01G05990',
'e_value' => '1e-15',
'bit_score' => '85.9',
'alignment_length' => '353',
'identity_percentage' => '23.51',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'PI00G61580' => array(
'gene_id' => 'PI00G61580',
'e_value' => '3e-15',
'bit_score' => '84.7',
'alignment_length' => '198',
'identity_percentage' => '32.83',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'ATR_00095G00110' => array(
'gene_id' => 'ATR_00095G00110',
'e_value' => '5e-14',
'bit_score' => '80.5',
'alignment_length' => '461',
'identity_percentage' => '22.34',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
),
'CNC64A_034G00560' => array(
'gene_id' => 'CNC64A_034G00560',
'e_value' => '5e-13',
'bit_score' => '76.6',
'alignment_length' => '343',
'identity_percentage' => '23.03',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P158659'
)
),
'PP00065G00350' => array(
'gene_id' => 'PP00065G00350',
'e_value' => '1e-12',
'bit_score' => '75.1',
'alignment_length' => '311',
'identity_percentage' => '21.86',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P159804'
)
),
'FC006G00220' => array(
'gene_id' => 'FC006G00220',
'e_value' => '1e-12',
'bit_score' => '76.3',
'alignment_length' => '314',
'identity_percentage' => '25.16',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'CNC64A_529G00010' => array(
'gene_id' => 'CNC64A_529G00010',
'e_value' => '2e-12',
'bit_score' => '70.5',
'alignment_length' => '89',
'identity_percentage' => '41.57',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P106179'
)
),
'OT_05G03110' => array(
'gene_id' => 'OT_05G03110',
'e_value' => '2e-11',
'bit_score' => '72.0',
'alignment_length' => '216',
'identity_percentage' => '29.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'CM13G02020' => array(
'gene_id' => 'CM13G02020',
'e_value' => '8e-10',
'bit_score' => '67.0',
'alignment_length' => '218',
'identity_percentage' => '26.61',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P093918'
)
),
'FBgn0053080' => array(
'gene_id' => 'FBgn0053080',
'e_value' => '1e-09',
'bit_score' => '66.6',
'alignment_length' => '400',
'identity_percentage' => '22.50',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P200983'
)
),
'emh755690' => array(
'gene_id' => 'emh755690',
'e_value' => '2e-09',
'bit_score' => '65.5',
'alignment_length' => '232',
'identity_percentage' => '26.29',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P144442'
)
),
'MP02G01920' => array(
'gene_id' => 'MP02G01920',
'e_value' => '3e-09',
'bit_score' => '65.1',
'alignment_length' => '223',
'identity_percentage' => '26.46',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'pte584840' => array(
'gene_id' => 'pte584840',
'e_value' => '2e-08',
'bit_score' => '62.4',
'alignment_length' => '495',
'identity_percentage' => '18.59',
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P110780'
)
),
'emh344740' => array(
'gene_id' => 'emh344740',
'e_value' => '4e-08',
'bit_score' => '61.2',
'alignment_length' => '304',
'identity_percentage' => '23.68',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P009893',
'ORTHOFAM' => 'ORTHO03P020542'
)
),
'ccr117820' => array(
'gene_id' => 'ccr117820',
'e_value' => '1e-07',
'bit_score' => '59.7',
'alignment_length' => '423',
'identity_percentage' => '23.64',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P003722',
'ORTHOFAM' => 'ORTHO03P003860'
)
),
'AA0007G01760' => array(
'gene_id' => 'AA0007G01760',
'e_value' => '4e-07',
'bit_score' => '58.2',
'alignment_length' => '411',
'identity_percentage' => '23.36',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P005572',
'ORTHOFAM' => 'ORTHO03P005276'
)
)
)
$similarity_hits_species = array(
'ath' => array(
(int) 0 => 'AT5G63840',
(int) 1 => 'AT3G23640',
(int) 2 => 'AT5G11720',
(int) 3 => 'AT3G45940',
(int) 4 => 'AT1G68560'
),
'atr' => array(
(int) 0 => 'ATR_00065G01570',
(int) 1 => 'ATR_00048G01310',
(int) 2 => 'ATR_00092G00960',
(int) 3 => 'ATR_00079G00110',
(int) 4 => 'ATR_00079G00080',
(int) 5 => 'ATR_00095G00110'
),
'osa' => array(
(int) 0 => 'OS03G11720',
(int) 1 => 'OS06G46340',
(int) 2 => 'OS07G23944',
(int) 3 => 'OS07G23880',
(int) 4 => 'OS06G46284',
(int) 5 => 'OS01G03950'
),
'ppa' => array(
(int) 0 => 'PP00109G00830',
(int) 1 => 'PP00242G00250',
(int) 2 => 'PP00005G01250',
(int) 3 => 'PP00041G01080',
(int) 4 => 'PP00140G00390',
(int) 5 => 'PP00060G00720',
(int) 6 => 'PP00157G00350',
(int) 7 => 'PP00264G00160',
(int) 8 => 'PP00011G01860',
(int) 9 => 'PP00013G02430',
(int) 10 => 'PP00264G00120',
(int) 11 => 'PP00080G01120',
(int) 12 => 'PP00025G00520',
(int) 13 => 'PP00086G00660',
(int) 14 => 'PP00119G00640',
(int) 15 => 'PP00006G00120',
(int) 16 => 'PP00245G00510',
(int) 17 => 'PP00043G00100',
(int) 18 => 'PP00281G00070',
(int) 19 => 'PP00041G01100',
(int) 20 => 'PP00065G00350'
),
'acg' => array(
(int) 0 => 'AC00G77390',
(int) 1 => 'AC00G97780',
(int) 2 => 'AC00G02390'
),
'vca' => array(
(int) 0 => 'VC00G110660'
),
'cvu' => array(
(int) 0 => 'CV00G24690',
(int) 1 => 'CV00G66180',
(int) 2 => 'CV00G87890',
(int) 3 => 'CV00G66200',
(int) 4 => 'CV00G74030',
(int) 5 => 'CV00G33310',
(int) 6 => 'CV00G34570'
),
'pse3' => array(
(int) 0 => 'PI00G24040',
(int) 1 => 'PI00G61580'
),
'ddi' => array(
(int) 0 => 'DDB_G0269154',
(int) 1 => 'DDB_G0269790'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.04g01620',
(int) 1 => 'RCC4223.199g00040',
(int) 2 => 'RCC4223.09g03870'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_08G05390',
(int) 1 => 'MRCC299_11G02870',
(int) 2 => 'MRCC299_08G03350'
),
'cre' => array(
(int) 0 => 'CR03G10710',
(int) 1 => 'CR03G11570'
),
'ome' => array(
(int) 0 => 'OM_16G01380',
(int) 1 => 'OM_16G02430',
(int) 2 => 'OM_02G02640',
(int) 3 => 'OM_03G03260'
),
'ota' => array(
(int) 0 => 'OT_08G02830',
(int) 1 => 'OT_04G02420',
(int) 2 => 'OT_08G03880',
(int) 3 => 'OT_05G03110'
),
'olu' => array(
(int) 0 => 'OL08G02650',
(int) 1 => 'OL04G02410',
(int) 2 => 'OL08G03830',
(int) 3 => 'OL05G03060'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000071650',
(int) 1 => 'ENSMUSG00000062646',
(int) 2 => 'ENSMUSG00000068587',
(int) 3 => 'ENSMUSG00000027790',
(int) 4 => 'ENSMUSG00000046312'
),
'nga' => array(
(int) 0 => 'Naga_100017g38',
(int) 1 => 'Naga_100114g11'
),
'mpu' => array(
(int) 0 => 'MP05G06760',
(int) 1 => 'MP05G04870',
(int) 2 => 'MP08G03280',
(int) 3 => 'MP02G01920'
),
'fcy' => array(
(int) 0 => 'FC002G01800',
(int) 1 => 'FC006G00220'
),
'hom' => array(
(int) 0 => 'ENSG00000214013',
(int) 1 => 'ENSG00000257335',
(int) 2 => 'ENSG00000090402',
(int) 3 => 'ENSG00000278563',
(int) 4 => 'ENSG00000257743',
(int) 5 => 'ENSG00000164976'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_01G07160',
(int) 1 => 'BPRRCC1105_06G04670',
(int) 2 => 'BPRRCC1105_01G05990'
),
'ccr' => array(
(int) 0 => 'ccr158380',
(int) 1 => 'ccr117820'
),
'cel' => array(
(int) 0 => 'WBGene00009583',
(int) 1 => 'WBGene00018682',
(int) 2 => 'WBGene00017071',
(int) 3 => 'WBGene00019895'
),
'ptri' => array(
(int) 0 => 'PTI_05G01610'
),
'tps' => array(
(int) 0 => 'TP07G02080'
),
'drm' => array(
(int) 0 => 'FBgn0027588',
(int) 1 => 'FBgn0261575',
(int) 2 => 'FBgn0053080'
),
'emh' => array(
(int) 0 => 'emh160400',
(int) 1 => 'emh626580',
(int) 2 => 'emh472720',
(int) 3 => 'emh746930',
(int) 4 => 'emh564800',
(int) 5 => 'emh552990',
(int) 6 => 'emh123040',
(int) 7 => 'emh362880',
(int) 8 => 'emh755690',
(int) 9 => 'emh344740'
),
'phs' => array(
(int) 0 => 'phs303660',
(int) 1 => 'phs293220',
(int) 2 => 'phs293240',
(int) 3 => 'phs92320',
(int) 4 => 'phs71110',
(int) 5 => 'phs71090'
),
'hsp' => array(
(int) 0 => 'HE0000G07800',
(int) 1 => 'HE0000G25410'
),
'aan' => array(
(int) 0 => 'AA0001G01930',
(int) 1 => 'AA0007G01760'
),
'apr' => array(
(int) 0 => 'AP00G19080',
(int) 1 => 'AP00G35250'
),
'scp' => array(
(int) 0 => 'SPAC1002.03c',
(int) 1 => 'SPAC1039.11c',
(int) 2 => 'SPAC30D11.01c',
(int) 3 => 'SPAPB24D3.10c'
),
'gsu' => array(
(int) 0 => 'gsu126010',
(int) 1 => 'gsu139510',
(int) 2 => 'gsu63580',
(int) 3 => 'gsu137050',
(int) 4 => 'gsu133460'
),
'cme' => array(
(int) 0 => 'CM13G00820',
(int) 1 => 'CM06G01210',
(int) 2 => 'CM13G02020'
),
'sac' => array(
(int) 0 => 'YBR229C'
),
'esi' => array(
(int) 0 => 'ES0080G00420'
),
'orcc809' => array(
(int) 0 => 'ORCC809_08G02600',
(int) 1 => 'ORCC809_04G02780',
(int) 2 => 'ORCC809_12G00530',
(int) 3 => 'ORCC809_05G02990'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_025G00750',
(int) 1 => 'CNC64A_008G02740',
(int) 2 => 'CNC64A_019G00790',
(int) 3 => 'CNC64A_034G00570',
(int) 4 => 'CNC64A_034G00560'
),
'pte' => array(
(int) 0 => 'pte388210',
(int) 1 => 'pte323710',
(int) 2 => 'pte374950',
(int) 3 => 'pte268290',
(int) 4 => 'pte186640',
(int) 5 => 'pte70280',
(int) 6 => 'pte180100',
(int) 7 => 'pte584840'
)
)
$gene_id = 'AT5G63840'
$all_species_index = array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$all_species = array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$gene_family_types_information = array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
)
$gene_family_types_configuration = array()
$data_identifier = 'AT5G63840'
$data_type = 'gene_id'
$allow_async_use = true
$gene_placeholder = 'ES0116G00040'
$gf_placeholder = 'HOM03P017607'
$title_for_layout = 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
$collapse1 = ''
$collapse2 = 'collapse in'
$similarity_hit = array(
'gene_id' => 'CNC64A_529G00010',
'e_value' => '2e-12',
'bit_score' => '70.5',
'alignment_length' => '89',
'identity_percentage' => '41.57',
'gf' => array(
'HOMFAM' => 'HOM03P000322',
'ORTHOFAM' => 'ORTHO03P106179'
)
)
$checked = null
$similarity_hit_gene = 'CNC64A_529G00010'
include - APP/View/Analysis/custom_tree_creation.ctp, line 169
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::render() - CORE/Cake/View/View.php, line 473
Controller::render() - CORE/Cake/Controller/Controller.php, line 963
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167
[main] - APP/webroot/index.php, line 146
|
2e-12 |
70.5 |
89 |
41.57 |