Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT2G35630	Arabidopsis thaliana	0.0	4045	1979	100.00
ATR_00077G02330	Amborella trichopoda	0.0	2738	2038	69.53
PP00131G00120	Physcomitrella patens	0.0	2226	2053	58.06
PP00066G00920	Physcomitrella patens	0.0	2211	2045	57.80
AC00G28480	Asterochloris sp. Cgr-DA1pho v2.0	0.0	951	2072	33.49
MP01G03750	Micromonas pusilla strain CCMP1545	0.0	883	1852	35.26
MRCC299_07G04460	Micromonas sp RCC299	0.0	869	1838	34.44
ORCC809_12G01780	Ostreococcus sp RCC809	0.0	831	1941	32.97
OL12G01300	Ostreococcus lucimarinus	0.0	814	1929	32.35
OT_12G01200	Ostreococcus tauri	0.0	776	2031	29.74
OM_07G01260	Ostreococcus mediterraneus	0.0	634	1477	32.43
ENSG00000175216	Homo sapiens	0.0	610	1431	30.40
PI00G44280	Picochlorum sp. SENEW3 (SE3)	2e-180	606	1992	27.56
ENSMUSG00000040549	Mus musculus	1e-179	605	1439	31.06
FBgn0027948	Drosophila melanogaster	9e-138	481	1440	30.14
OS01G60050	Oryza sativa	4e-129	416	383	58.75
DDB_G0268616	Dictyostelium discoideum	4e-103	373	1071	27.64
ES0172G00180	Ectocarpus siliculosus	3e-100	364	1455	26.39
CR03G01950	Chlamydomonas reinhardtii	6e-99	360	862	30.63
pte101920	Paramecium tetraurelia	1e-86	320	1341	24.68
VC00G48160	Volvox carteri	3e-85	315	504	37.30
OS01G60040	Oryza sativa	3e-80	272	216	67.59
pte154810	Paramecium tetraurelia	8e-79	294	1332	24.62
PP00130G00060	Physcomitrella patens	3e-73	261	279	54.84
ATR_00221G00060	Amborella trichopoda	7e-73	257	277	58.48
AP00G65580	Auxenochlorella protothecoides	2e-69	253	524	36.45
AP00G65590	Auxenochlorella protothecoides	6e-68	256	753	29.88
gsu119150	Galdieria sulphuraria	3e-66	254	517	32.88
ccr186560	Chondrus crispus	5e-55	217	785	26.75
ATR_00092G01570	Amborella trichopoda	1e-51	188	179	55.31
SPCC895.07	Schizosaccharomyces pombe	2e-51	201	528	30.30
RCC4223.02g02400	Picochlorum_RCC4223	8e-42	174	402	31.84
BPRRCC1105_07G03510	Bathycoccus prasinos	3e-38	161	566	27.92
SPCC736.14	Schizosaccharomyces pombe	5e-38	159	520	25.77
CNC64A_022G01240	Chlorella sp NC64A	7e-34	147	262	32.82
phs266590	Phytophtora sojae	1e-33	147	529	25.90
ATR_00965G00010	Amborella trichopoda	2e-32	128	82	73.17
FC013G01520	Fragilariopsis cylindrus	7e-32	141	1483	22.12
YLR045C	Saccharomyces cerevisiae strain S288C	7e-32	139	740	24.86
PTI_15G02300	Phaeodactylum tricornutum	3e-31	139	1547	21.72
ATR_00016G03750	Amborella trichopoda	8e-30	124	122	61.48
HE0000G14900	Helicosporidium sp.	2e-28	120	164	44.51
CM15G01950	Cyanidioschyzon merolae	2e-28	129	580	27.24
pte723480	Paramecium tetraurelia	3e-28	129	478	24.06
pte618840	Paramecium tetraurelia	3e-27	125	465	25.81
pte789780	Paramecium tetraurelia	1e-25	120	590	22.37
ATR_00015G01250	Amborella trichopoda	3e-25	107	66	80.30
pte778820	Paramecium tetraurelia	2e-24	116	473	24.95
ATR_00015G01260	Amborella trichopoda	9e-23	100	61	78.69
WBGene00006994	Caenorhabditis elegans	1e-22	110	266	26.32
ATR_00069G00050	Amborella trichopoda	1e-16	83.6	65	60.00
AT3G28155	Arabidopsis thaliana	9e-14	75.5	94	47.87
TP07G05940	Thalassiosira pseudonana	2e-13	80.9	489	23.52
DDB_G0276805	Dictyostelium discoideum	5e-10	69.3	222	23.87
WBGene00018781	Caenorhabditis elegans	2e-09	67.0	243	27.57

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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