Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G27250	Arabidopsis thaliana	3e-96	280	138	100.00
AT1G27220	Arabidopsis thaliana	5e-43	146	101	65.35
PP00363G00060	Physcomitrella patens	1e-20	92.8	84	52.38
AT1G24190	Arabidopsis thaliana	2e-20	92.4	88	51.14
PP00403G00290	Physcomitrella patens	8e-20	90.5	73	57.53
PP00212G00120	Physcomitrella patens	1e-19	89.7	73	57.53
PP00101G00880	Physcomitrella patens	3e-19	89.0	73	56.16
CNC64A_032G00370	Chlorella sp NC64A	4e-19	83.6	79	49.37
AT1G70060	Arabidopsis thaliana	8e-19	87.4	88	50.00
AT1G24200	Arabidopsis thaliana	3e-18	81.6	83	45.78
ATR_00036G01080	Amborella trichopoda	1e-17	79.0	87	47.13
CV00G13480	Coccomyxa subellipsoidea C-169	4e-17	82.4	73	49.32
PP00178G00660	Physcomitrella patens	5e-17	79.0	73	57.53
RCC4223.04g02910	Picochlorum_RCC4223	5e-17	82.0	76	50.00
PI00G68970	Picochlorum sp. SENEW3 (SE3)	5e-17	82.0	76	50.00
BPRRCC1105_01G03950	Bathycoccus prasinos	9e-17	81.6	73	49.32
ATR_00090G01090	Amborella trichopoda	2e-16	80.1	73	53.42
AT3G01320	Arabidopsis thaliana	5e-16	79.3	73	50.68
CR03G08780	Chlamydomonas reinhardtii	5e-16	79.3	74	50.00
OS05G01020	Oryza sativa	7e-16	79.0	80	48.75
MP02G03020	Micromonas pusilla strain CCMP1545	8e-16	78.6	71	49.30
MRCC299_01G02440	Micromonas sp RCC299	1e-15	78.2	70	50.00
HE0000G60260	Helicosporidium sp.	1e-15	74.3	71	46.48
AT5G15020	Arabidopsis thaliana	1e-15	78.2	73	49.32
VC00G147530	Volvox carteri	1e-15	78.2	74	48.65
AT1G24210	Arabidopsis thaliana	3e-15	72.8	77	40.26
AT1G10450	Arabidopsis thaliana	5e-15	76.3	80	47.50
OM_01G02760	Ostreococcus mediterraneus	7e-15	75.9	73	45.21
ORCC809_01G02570	Ostreococcus sp RCC809	1e-14	75.1	75	42.67
OT_01G04000	Ostreococcus tauri	1e-14	75.1	90	40.00
AT5G15030	Arabidopsis thaliana	2e-14	72.0	88	44.32
AT1G59890	Arabidopsis thaliana	2e-14	74.3	68	48.53
OL01G04190	Ostreococcus lucimarinus	3e-14	73.9	73	43.84
AT1G23810	Arabidopsis thaliana	2e-13	68.2	70	41.43
AT1G27260	Arabidopsis thaliana	3e-13	67.8	80	36.25
ENSG00000169375	Homo sapiens	4e-13	70.9	80	42.50
ENSMUSG00000042557	Mus musculus	4e-13	70.9	80	42.50
AT1G24250	Arabidopsis thaliana	4e-13	67.8	70	42.86
CM17G01250	Cyanidioschyzon merolae	1e-12	69.3	80	42.50
AA0022G00920	Aureococcus anophagefferens	1e-12	63.5	64	43.75
AA0018G00030	Aureococcus anophagefferens	2e-12	63.5	69	40.58
BPRRCC1105_03G02470	Bathycoccus prasinos	2e-12	67.4	79	44.30
gsu57580	Galdieria sulphuraria	5e-12	67.4	81	39.51
FBgn0022764	Drosophila melanogaster	9e-12	66.6	103	35.92
AT1G27280	Arabidopsis thaliana	1e-11	63.5	69	42.03
ccr107580	Chondrus crispus	2e-11	65.9	70	44.29
AT5G35610	Arabidopsis thaliana	2e-11	62.0	74	43.24
ENSG00000127511	Homo sapiens	2e-11	65.5	64	46.88
ENSMUSG00000031622	Mus musculus	3e-11	65.1	64	46.88
OL05G01930	Ostreococcus lucimarinus	4e-11	63.9	72	41.67
AT4G12020	Arabidopsis thaliana	4e-11	64.7	79	43.04
MP03G06980	Micromonas pusilla strain CCMP1545	2e-10	62.0	79	43.04
AT5G15040	Arabidopsis thaliana	2e-10	58.2	65	41.54
TP03G03670	Thalassiosira pseudonana	4e-10	58.5	70	37.14
PTI_29G00720	Phaeodactylum tricornutum	4e-10	61.6	92	36.96
AT1G70030	Arabidopsis thaliana	4e-10	58.5	73	35.62
AA0039G00150	Aureococcus anophagefferens	4e-10	61.6	70	41.43
FC015G01010	Fragilariopsis cylindrus	6e-10	60.8	69	40.58
PTI_10G03700	Phaeodactylum tricornutum	9e-10	60.5	70	38.57
ES0042G00150	Ectocarpus siliculosus	1e-09	60.5	70	41.43
ccr54500	Chondrus crispus	1e-09	60.5	100	33.00
DDB_G0281045	Dictyostelium discoideum	1e-09	60.5	64	42.19
FC008G06010	Fragilariopsis cylindrus	1e-09	59.7	70	38.57
WBGene00004117	Caenorhabditis elegans	2e-09	59.7	79	39.24
MRCC299_05G02560	Micromonas sp RCC299	2e-09	59.3	74	40.54
PP00122G00540	Physcomitrella patens	2e-09	59.3	76	42.11
AT1G27240	Arabidopsis thaliana	3e-09	56.2	69	31.88
AT1G24230	Arabidopsis thaliana	3e-09	57.0	76	38.16
ccr11660	Chondrus crispus	3e-09	56.2	69	40.58
phs105200	Phytophtora sojae	3e-09	58.9	82	39.02
OM_03G02080	Ostreococcus mediterraneus	3e-09	58.2	68	36.76
AP00G33310	Auxenochlorella protothecoides	4e-09	55.5	43	58.14
SPBC12C2.10c	Schizosaccharomyces pombe	7e-09	57.8	69	37.68
YOL004W	Saccharomyces cerevisiae strain S288C	1e-08	57.4	69	39.13
MRCC299_01G02450	Micromonas sp RCC299	1e-08	57.0	38	65.79
TP07G04750	Thalassiosira pseudonana	1e-08	57.0	70	38.57
AT1G24220	Arabidopsis thaliana	2e-08	55.8	56	41.07
SPBC1734.16c	Schizosaccharomyces pombe	4e-08	55.5	70	37.14
ES0055G00610	Ectocarpus siliculosus	8e-08	54.3	72	37.50
OS08G25200	Oryza sativa	9e-08	50.8	72	31.94
AC00G27900	Asterochloris sp. Cgr-DA1pho v2.0	3e-07	52.8	42	57.14
emh682350	Emiliania huxleyi	5e-07	48.9	41	53.66
Naga_100390g3	Nannochloropsis gaditana	7e-07	51.6	80	36.25
AT1G27270	Arabidopsis thaliana	8e-07	50.1	80	41.25
OT_05G01970	Ostreococcus tauri	1e-06	50.1	64	42.19
ORCC809_05G01930	Ostreococcus sp RCC809	3e-06	49.3	61	40.98
emh754380	Emiliania huxleyi	8e-06	48.1	43	53.49

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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