Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.phytosterol biosynthesis

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 5D 1 CH_ata_22 10 55 0.0000000000000373808
Lolium perenne Lp_chr5_0 1 CH_lpe_402 4 23 0.000584606
Triticum aestivum Chr5A 1 CH_tae_191 8 19 0.000000000000458815
Triticum aestivum Chr5D 1 CH_tae_204 10 63 0.00000000000183621
Triticum dicoccoides 5B 1 CH_tdi_346 4 8 0.000026133
Triticum dicoccoides 5A 1 CH_tdi_53 8 17 0.0000000000000428798
Triticum turgidum chr5A 1 CH_ttu_134 7 24 0.00000000109445
Aegilops tauschii 5D 2 CH_ata_22 10 55 0.0000000000000373808
Lolium perenne Lp_chr5_0 2 CH_lpe_402 4 23 0.000584606
Triticum aestivum Chr5A 2 CH_tae_191 8 19 0.000000000000458815
Triticum aestivum Chr5D 2 CH_tae_204 10 63 0.00000000000183621
Triticum dicoccoides 5B 2 CH_tdi_346 4 8 0.000026133
Triticum dicoccoides 5A 2 CH_tdi_53 8 17 0.0000000000000428798
Triticum turgidum chr5A 2 CH_ttu_134 7 24 0.00000000109445

Available child term results

Ontology identifier Description Number of clusters
5.5.1 Lipid metabolism.phytosterol biosynthesis.plant sterol pathway 4
5.5.1.1 Lipid metabolism.phytosterol biosynthesis.plant sterol pathway.sterol C-24 methyltransferase 16
5.5.1.2 Lipid metabolism.phytosterol biosynthesis.plant sterol pathway.obtusifoliol 14-alpha demethylase 46
5.5.1.4 Lipid metabolism.phytosterol biosynthesis.plant sterol pathway.sterol delta8-delta7 isomerase 30
5.5.1.5 Lipid metabolism.phytosterol biosynthesis.plant sterol pathway.delta7-sterol C-5 desaturase 6
5.5.1.7 Lipid metabolism.phytosterol biosynthesis.plant sterol pathway.sterol delta24 reductase 6
5.5.1.8 Lipid metabolism.phytosterol biosynthesis.plant sterol pathway.cyclopropylsterol isomerase (CPI) 4
5.5.1.9 Lipid metabolism.phytosterol biosynthesis.plant sterol pathway.sterol C-22 desaturase 16
5.5.2.1 Lipid metabolism.phytosterol biosynthesis.phytosterol C4-demethylation complex.methylsterol monooxygenase component SMO1 14
5.5.2.2 Lipid metabolism.phytosterol biosynthesis.phytosterol C4-demethylation complex.methylsterol monooxygenase component SMO2 4
5.5.2.3 Lipid metabolism.phytosterol biosynthesis.phytosterol C4-demethylation complex.3-beta hydroxysteroid dehydrogenase component CSD 34
5.5.2.4 Lipid metabolism.phytosterol biosynthesis.phytosterol C4-demethylation complex.sterone ketoreductase component SKR 42
5.5.2.5 Lipid metabolism.phytosterol biosynthesis.phytosterol C4-demethylation complex.scaffold protein component ERG28 20
5.5.3.1 Lipid metabolism.phytosterol biosynthesis.phytosterol glycosylation.UDP-glucose:sterol glucosyltransferase 6
5.5.4.1 Lipid metabolism.phytosterol biosynthesis.phytosterol esterification.phospholipid:sterol acyltransferase 2
5.5.4.2 Lipid metabolism.phytosterol biosynthesis.phytosterol esterification.acyl-CoA:cholesterol acyltransferase 38
5.5.5.1 Lipid metabolism.phytosterol biosynthesis.phytosterol homeostasis.regulatory protein (HISE1) 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001