Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.phytosterol biosynthesis.phytosterol C4-demethylation complex.scaffold protein component ERG28

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000001 1 CH_cpu_247 4 8 0.0000000240288
Cenchrus purpureus GWHAORA00000001 1 CH_cpu_61 6 12 0.0000000000000159103
Digitaria exilis Dexi_CM05836_chr09B 1 CH_dex_113 4 6 0.00000000168099
Digitaria exilis Dexi_CM05836_chr09A 1 CH_dex_59 5 8 0.0000000000010486
Eragrostis curvula 5 1 CH_ecu_298 3 7 0.000000315657
Magnolia biondii Chr16 1 CH_mbi_428 2 3 0.000145695
Setaria italica scaffold_8 1 CH_sit_202 3 5 0.00000176838
Setaria viridis Chr_09 1 CH_svi_475 2 2 0.000782677
Zoysia japonica ssp. nagirizaki Zjn_sc00019.1 1 CH_zjn_32 3 4 0.000000164231
Zea mays B73 3 1 CH_zma_172 3 15 0.0000997797
Cenchrus purpureus GWHAORA00000001 2 CH_cpu_247 4 8 0.0000000240288
Cenchrus purpureus GWHAORA00000001 2 CH_cpu_61 6 12 0.0000000000000159103
Digitaria exilis Dexi_CM05836_chr09B 2 CH_dex_113 4 6 0.00000000168099
Digitaria exilis Dexi_CM05836_chr09A 2 CH_dex_59 5 8 0.0000000000010486
Eragrostis curvula 5 2 CH_ecu_298 3 7 0.000000315657
Magnolia biondii Chr16 2 CH_mbi_428 2 3 0.000145695
Setaria italica scaffold_8 2 CH_sit_202 3 5 0.00000176838
Setaria viridis Chr_09 2 CH_svi_475 2 2 0.000782677
Zoysia japonica ssp. nagirizaki Zjn_sc00019.1 2 CH_zjn_32 3 4 0.000000164231
Zea mays B73 3 2 CH_zma_172 3 15 0.0000997797

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001