Functional clusters

Information

  • Type Gene Ontology
  • Description catalytic activity, acting on RNA

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Utricularia gibba unitig_46 3 CH_ugi_135 5 11 0.00070507
Utricularia gibba unitig_46 4 CH_ugi_135 5 11 0.00070507

Available child term results

Ontology identifier Description Number of clusters
GO:0000175 3'-5'-exoribonuclease activity 2
GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity 6
GO:0000213 tRNA-intron endonuclease activity 10
GO:0000215 tRNA 2'-phosphotransferase activity 4
GO:0001054 RNA polymerase I activity 2
GO:0001055 RNA polymerase II activity 8
GO:0002161 aminoacyl-tRNA editing activity 4
GO:0003724 RNA helicase activity 4
GO:0003896 DNA primase activity 4
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 112
GO:0003968 RNA-directed 5'-3' RNA polymerase activity 126
GO:0003972 RNA ligase (ATP) activity 32
GO:0004045 aminoacyl-tRNA hydrolase activity 12
GO:0004482 mRNA (guanine-N7-)-methyltransferase activity 10
GO:0004521 endoribonuclease activity 8
GO:0004523 RNA-DNA hybrid ribonuclease activity 56
GO:0004525 ribonuclease III activity 60
GO:0004534 5'-3' exoribonuclease activity 2
GO:0004535 poly(A)-specific ribonuclease activity 80
GO:0004540 ribonuclease activity 32
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity 24
GO:0004813 alanine-tRNA ligase activity 2
GO:0004814 arginine-tRNA ligase activity 2
GO:0004815 aspartate-tRNA ligase activity 4
GO:0004820 glycine-tRNA ligase activity 4
GO:0004821 histidine-tRNA ligase activity 2
GO:0004822 isoleucine-tRNA ligase activity 18
GO:0004823 leucine-tRNA ligase activity 4
GO:0004824 lysine-tRNA ligase activity 2
GO:0004826 phenylalanine-tRNA ligase activity 4
GO:0004828 serine-tRNA ligase activity 4
GO:0004829 threonine-tRNA ligase activity 2
GO:0004831 tyrosine-tRNA ligase activity 8
GO:0004832 valine-tRNA ligase activity 6
GO:0008173 RNA methyltransferase activity 2
GO:0008176 tRNA (guanine-N7-)-methyltransferase activity 20
GO:0008419 RNA lariat debranching enzyme activity 2
GO:0008883 glutamyl-tRNA reductase activity 12
GO:0016423 tRNA (guanine) methyltransferase activity 2
GO:0016428 tRNA (cytosine-5-)-methyltransferase activity 4
GO:0016429 tRNA (adenine-N1-)-methyltransferase activity 12
GO:0016435 rRNA (guanine) methyltransferase activity 8
GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters 4
GO:0030598 rRNA N-glycosylase activity 46
GO:0032574 5'-3' RNA helicase activity 4
GO:0033897 ribonuclease T2 activity 184
GO:0044748 3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing 4
GO:0050265 RNA uridylyltransferase activity 2
GO:0051499 D-aminoacyl-tRNA deacylase activity 20
GO:0052381 tRNA dimethylallyltransferase activity 20
GO:0052907 23S rRNA (adenine(1618)-N(6))-methyltransferase activity 2
GO:0070037 rRNA (pseudouridine) methyltransferase activity 30
GO:0070042 rRNA (uridine-N3-)-methyltransferase activity 6
GO:0071164 RNA trimethylguanosine synthase activity 6
GO:0102521 tRNA-4-demethylwyosine synthase activity 4
GO:0106050 tRNA 2'-O-methyltransferase activity 4
GO:0140102 catalytic activity, acting on a rRNA 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001