Functional clusters

Information

  • Type Gene Ontology
  • Description ribonuclease T2 activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-1 3 CH_aar_243 2 2 0.000547395
Actinidia chinensis Lachesis_group16 3 CH_ach_101 3 4 0.0000144427
Actinidia chinensis Lachesis_group11 3 CH_ach_80 3 3 0.00000361188
Arabidopsis lyrata scaffold_1 3 CH_aly_290 2 2 0.000396027
Avicennia marina ScioBoG_102831_HRSCAF_103044 3 CH_ama_112 2 2 0.000517331
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 3 CH_amhyb_8 6 7 5.59236e-17
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 3 CH_arhy_325 4 16 0.000000874621
Amborella trichopoda AmTr_v1.0_scaffold00064 3 CH_atr_47 4 4 0.0000000000225629
Brassica napus A09 3 CH_bna_204 3 3 0.000000235147
Brassica oleracea C8 3 CH_bol_383 2 2 0.000686409
Brassica rapa A09 3 CH_bra_83 3 3 0.000000232236
Beta vulgaris Chr6_EL10_PGA_scaffold0 3 CH_bvu_15 6 6 1.83872e-17
Cannabis sativa NC_044370.1 3 CH_cansat_188 3 13 0.0000369569
Cannabis sativa NC_044379.1 3 CH_cansat_370 2 2 0.000984963
Capsicum annuum PGAv.1.6.scaffold567 3 CH_can_473 3 17 0.000832338
Capsicum annuum PGAv.1.6.scaffold584 3 CH_can_60 5 5 0.0000000000000880461
Cicer arietinum L. Ca_LG2_v3 3 CH_car_44 3 4 0.00000036343
Coffea canephora chr11 3 CH_ccan_6 5 12 0.00000000000000391196
Coffea canephora chr5 3 CH_ccan_78 4 52 0.0000000627451
Carya illinoinensis Chr05 3 CH_cil_132 4 4 0.0000000000900215
Citrullus lanatus CG_Chr10 3 CH_cla_9 6 9 0.0000000000000311641
Corchorus olitorius AWUE01018132.1 3 CH_col_90 2 2 0.000292099
Carica papaya supercontig_128 3 CH_cpa_18 4 4 0.0000000000386679
Chenopodium quinoa C_Quinoa_Scaffold_1214 3 CH_cqu_10 10 10 1.67467e-29
Chenopodium quinoa C_Quinoa_Scaffold_3751 3 CH_cqu_15 9 9 4.71163e-26
Capsella rubella scaffold_1 3 CH_cru_332 2 2 0.000731154
Cucumis sativus L. chr3 3 CH_csa_151 4 24 0.0000131693
Davidia involucrata GWHABJS00000008 3 CH_din_152 3 3 0.00000107306
Durio zibethinus NW_019167926.1 3 CH_dzi_136 3 3 0.00000146619
Durio zibethinus NW_019167882.1 3 CH_dzi_38 5 6 0.000000000000623578
Erigeron canadensis Conyza_canadensis_scaffold:7 3 CH_eca_364 2 2 0.000269233
Eucalyptus grandis Chr07 3 CH_egr_406 3 3 0.0000000205534
Erythranthe guttata scaffold_12 3 CH_egut_411 2 2 0.000728147
Gossypium hirsutum D10 3 CH_ghi_236 5 40 0.000000200717
Gossypium hirsutum A06 3 CH_ghi_309 3 3 0.00000312821
Glycine max Gm02 3 CH_gma_74 4 4 0.000000000223929
Gossypium raimondii Chr11 3 CH_gra_31 9 79 0.00000000000000201808
Helianthus annuus HanXRQChr08 3 CH_han_144 5 25 0.000000000111769
Hydrangea macrophylla Hma1.2p1_0795F.1 3 CH_hma_48 3 3 0.0000000185113
Lupinus albus Lalb_Chr10 3 CH_lal_68 4 4 0.000000000434141
Lotus japonicus chr2 3 CH_lja_325 2 2 0.000429046
Lonicera japonica GWHAAZE00000006 3 CH_lonja_591 2 2 0.000898311
Lactuca sativa Lsat_1_v8_lg_8 3 CH_lsa_168 3 3 0.0000000396314
Magnolia biondii Chr04 3 CH_mbi_136 4 4 0.00000000205692
Magnolia biondii Chr07 3 CH_mbi_221 4 9 0.000000258712
Magnolia biondii Chr07 3 CH_mbi_235 4 11 0.000000431034
Magnolia biondii Chr05 3 CH_mbi_324 4 18 0.00000626299
Magnolia biondii Chr01 3 CH_mbi_78 5 7 0.0000000000178204
Malus domestica Chr13 3 CH_mdo_279 3 3 0.00000120796
Malus domestica Chr15 3 CH_mdo_439 3 8 0.0000675766
Manihot esculenta Chromosome04 3 CH_mes_296 3 18 0.0000911456
Manihot esculenta Chromosome05 3 CH_mes_427 2 2 0.000915947
Medicago truncatula chr5 3 CH_mtr_100 6 9 0.000000000000513667
Medicago truncatula chr2 3 CH_mtr_273 5 17 0.0000000572631
Medicago truncatula chr2 3 CH_mtr_721 3 7 0.000687128
Nelumbo nucifera chr4 3 CH_nnu_47 6 36 0.000000000610676
Oryza sativa ssp. japonica chr07 3 CH_osa_187 3 4 0.00000140556
Petunia axillaris Peaxi162Scf00457 3 CH_pax_148 3 3 0.00000719496
Petunia axillaris Peaxi162Scf00023 3 CH_pax_31 5 6 0.0000000000128177
Petunia axillaris Peaxi162Scf00222 3 CH_pax_50 4 4 0.00000000404993
Punica granatum NC_045132.1 3 CH_pgr_369 2 3 0.000675279
Pisum sativum chr2LG1 3 CH_psa_34 5 6 0.00000000000206145
Papaver somniferum NW_020622713.1 3 CH_pso_220 4 9 0.000000031593
Papaver somniferum NC_039368.1 3 CH_pso_380 3 5 0.000011721
Papaver somniferum NC_039359.1 3 CH_pso_431 3 7 0.0000410095
Phaseolus vulgaris Chr04 3 CH_pvu_153 5 58 0.00000127004
Phaseolus vulgaris Chr06 3 CH_pvu_162 3 3 0.00000231593
Quercus lobata 3 3 CH_qlo_664 3 5 0.0000223787
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_252 4 6 0.0000000425933
Salvia bowleyana GWHASIU00000007 3 CH_sbo_377 2 2 0.000136494
Salix brachista GWHAAZH00000010 3 CH_sbr_361 2 2 0.00063014
Salix brachista GWHAAZH00000008 3 CH_sbr_362 2 2 0.00063014
Sechium edule LG06 3 CH_sed_191 3 6 0.000124436
Sechium edule LG08 3 CH_sed_223 3 8 0.000348117
Sequoiadendron giganteum chr5 3 CH_sgi_1327 2 2 0.000730727
Solanum lycopersicum SL4.0ch07 3 CH_sly_214 3 3 0.000000852661
Selaginella moellendorffii scaffold_6 3 CH_smo_154 2 2 0.000280112
Schrenkiella parvula ch1-1 3 CH_spa_214 2 2 0.00078734
Solanum pennellii Spenn-ch07 3 CH_spe_153 3 3 0.000000249282
Solanum tuberosum ST4.03ch07 3 CH_stu_99 5 7 0.00000000000474262
Trochodendron aralioides group16 3 CH_tar_493 2 2 0.000900549
Theobroma cacao Chromosome_10 3 CH_tca_9 10 15 2.50941e-26
Tarenaya hassleriana NW_010961290.1 3 CH_tha_164 2 2 0.000419082
Trifolium pratense Tp57577_TGAC_v2_LG3 3 CH_tpr_135 3 4 0.00000412485
Tripterygium wilfordii NC_052253.1 3 CH_twi_13 10 21 1.16413e-18
Tripterygium wilfordii NC_052254.1 3 CH_twi_214 4 10 0.0000566448
Tripterygium wilfordii NC_052243.1 3 CH_twi_251 3 3 0.000168022
Tripterygium wilfordii NC_052233.1 3 CH_twi_252 3 3 0.000168022
Tripterygium wilfordii NC_052237.1 3 CH_twi_253 3 3 0.000168022
Tripterygium wilfordii NC_052251.1 3 CH_twi_54 5 5 0.000000000432267
Utricularia gibba unitig_26 3 CH_ugi_127 2 2 0.000492287
Zea mays 3 3 CH_zma_334 2 2 0.000766969
Aethionema arabicum LG-1 4 CH_aar_243 2 2 0.000547395
Actinidia chinensis Lachesis_group16 4 CH_ach_101 3 4 0.0000144427
Actinidia chinensis Lachesis_group11 4 CH_ach_80 3 3 0.00000361188
Arabidopsis lyrata scaffold_1 4 CH_aly_290 2 2 0.000396027
Avicennia marina ScioBoG_102831_HRSCAF_103044 4 CH_ama_112 2 2 0.000517331
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 4 CH_amhyb_8 6 7 5.59236e-17
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 4 CH_arhy_325 4 16 0.000000874621
Amborella trichopoda AmTr_v1.0_scaffold00064 4 CH_atr_47 4 4 0.0000000000225629
Brassica napus A09 4 CH_bna_204 3 3 0.000000235147
Brassica oleracea C8 4 CH_bol_383 2 2 0.000686409
Brassica rapa A09 4 CH_bra_83 3 3 0.000000232236
Beta vulgaris Chr6_EL10_PGA_scaffold0 4 CH_bvu_15 6 6 1.83872e-17
Cannabis sativa NC_044370.1 4 CH_cansat_188 3 13 0.0000369569
Cannabis sativa NC_044379.1 4 CH_cansat_370 2 2 0.000984963
Capsicum annuum PGAv.1.6.scaffold567 4 CH_can_473 3 17 0.000832338
Capsicum annuum PGAv.1.6.scaffold584 4 CH_can_60 5 5 0.0000000000000880461
Cicer arietinum L. Ca_LG2_v3 4 CH_car_44 3 4 0.00000036343
Coffea canephora chr11 4 CH_ccan_6 5 12 0.00000000000000391196
Coffea canephora chr5 4 CH_ccan_78 4 52 0.0000000627451
Carya illinoinensis Chr05 4 CH_cil_132 4 4 0.0000000000900215
Citrullus lanatus CG_Chr10 4 CH_cla_9 6 9 0.0000000000000311641
Corchorus olitorius AWUE01018132.1 4 CH_col_90 2 2 0.000292099
Carica papaya supercontig_128 4 CH_cpa_18 4 4 0.0000000000386679
Chenopodium quinoa C_Quinoa_Scaffold_1214 4 CH_cqu_10 10 10 1.67467e-29
Chenopodium quinoa C_Quinoa_Scaffold_3751 4 CH_cqu_15 9 9 4.71163e-26
Capsella rubella scaffold_1 4 CH_cru_332 2 2 0.000731154
Cucumis sativus L. chr3 4 CH_csa_151 4 24 0.0000131693
Davidia involucrata GWHABJS00000008 4 CH_din_152 3 3 0.00000107306
Durio zibethinus NW_019167926.1 4 CH_dzi_136 3 3 0.00000146619
Durio zibethinus NW_019167882.1 4 CH_dzi_38 5 6 0.000000000000623578
Erigeron canadensis Conyza_canadensis_scaffold:7 4 CH_eca_364 2 2 0.000269233
Eucalyptus grandis Chr07 4 CH_egr_406 3 3 0.0000000205534
Erythranthe guttata scaffold_12 4 CH_egut_411 2 2 0.000728147
Gossypium hirsutum D10 4 CH_ghi_236 5 40 0.000000200717
Gossypium hirsutum A06 4 CH_ghi_309 3 3 0.00000312821
Glycine max Gm02 4 CH_gma_74 4 4 0.000000000223929
Gossypium raimondii Chr11 4 CH_gra_31 9 79 0.00000000000000201808
Helianthus annuus HanXRQChr08 4 CH_han_144 5 25 0.000000000111769
Hydrangea macrophylla Hma1.2p1_0795F.1 4 CH_hma_48 3 3 0.0000000185113
Lupinus albus Lalb_Chr10 4 CH_lal_68 4 4 0.000000000434141
Lotus japonicus chr2 4 CH_lja_325 2 2 0.000429046
Lonicera japonica GWHAAZE00000006 4 CH_lonja_591 2 2 0.000898311
Lactuca sativa Lsat_1_v8_lg_8 4 CH_lsa_168 3 3 0.0000000396314
Magnolia biondii Chr04 4 CH_mbi_136 4 4 0.00000000205692
Magnolia biondii Chr07 4 CH_mbi_221 4 9 0.000000258712
Magnolia biondii Chr07 4 CH_mbi_235 4 11 0.000000431034
Magnolia biondii Chr05 4 CH_mbi_324 4 18 0.00000626299
Magnolia biondii Chr01 4 CH_mbi_78 5 7 0.0000000000178204
Malus domestica Chr13 4 CH_mdo_279 3 3 0.00000120796
Malus domestica Chr15 4 CH_mdo_439 3 8 0.0000675766
Manihot esculenta Chromosome04 4 CH_mes_296 3 18 0.0000911456
Manihot esculenta Chromosome05 4 CH_mes_427 2 2 0.000915947
Medicago truncatula chr5 4 CH_mtr_100 6 9 0.000000000000513667
Medicago truncatula chr2 4 CH_mtr_273 5 17 0.0000000572631
Medicago truncatula chr2 4 CH_mtr_721 3 7 0.000687128
Nelumbo nucifera chr4 4 CH_nnu_47 6 36 0.000000000610676
Oryza sativa ssp. japonica chr07 4 CH_osa_187 3 4 0.00000140556
Petunia axillaris Peaxi162Scf00457 4 CH_pax_148 3 3 0.00000719496
Petunia axillaris Peaxi162Scf00023 4 CH_pax_31 5 6 0.0000000000128177
Petunia axillaris Peaxi162Scf00222 4 CH_pax_50 4 4 0.00000000404993
Punica granatum NC_045132.1 4 CH_pgr_369 2 3 0.000675279
Pisum sativum chr2LG1 4 CH_psa_34 5 6 0.00000000000206145
Papaver somniferum NW_020622713.1 4 CH_pso_220 4 9 0.000000031593
Papaver somniferum NC_039368.1 4 CH_pso_380 3 5 0.000011721
Papaver somniferum NC_039359.1 4 CH_pso_431 3 7 0.0000410095
Phaseolus vulgaris Chr04 4 CH_pvu_153 5 58 0.00000127004
Phaseolus vulgaris Chr06 4 CH_pvu_162 3 3 0.00000231593
Quercus lobata 3 4 CH_qlo_664 3 5 0.0000223787
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_252 4 6 0.0000000425933
Salvia bowleyana GWHASIU00000007 4 CH_sbo_377 2 2 0.000136494
Salix brachista GWHAAZH00000010 4 CH_sbr_361 2 2 0.00063014
Salix brachista GWHAAZH00000008 4 CH_sbr_362 2 2 0.00063014
Sechium edule LG06 4 CH_sed_191 3 6 0.000124436
Sechium edule LG08 4 CH_sed_223 3 8 0.000348117
Sequoiadendron giganteum chr5 4 CH_sgi_1327 2 2 0.000730727
Solanum lycopersicum SL4.0ch07 4 CH_sly_214 3 3 0.000000852661
Selaginella moellendorffii scaffold_6 4 CH_smo_154 2 2 0.000280112
Schrenkiella parvula ch1-1 4 CH_spa_214 2 2 0.00078734
Solanum pennellii Spenn-ch07 4 CH_spe_153 3 3 0.000000249282
Solanum tuberosum ST4.03ch07 4 CH_stu_99 5 7 0.00000000000474262
Trochodendron aralioides group16 4 CH_tar_493 2 2 0.000900549
Theobroma cacao Chromosome_10 4 CH_tca_9 10 15 2.50941e-26
Tarenaya hassleriana NW_010961290.1 4 CH_tha_164 2 2 0.000419082
Trifolium pratense Tp57577_TGAC_v2_LG3 4 CH_tpr_135 3 4 0.00000412485
Tripterygium wilfordii NC_052253.1 4 CH_twi_13 10 21 1.16413e-18
Tripterygium wilfordii NC_052254.1 4 CH_twi_214 4 10 0.0000566448
Tripterygium wilfordii NC_052243.1 4 CH_twi_251 3 3 0.000168022
Tripterygium wilfordii NC_052233.1 4 CH_twi_252 3 3 0.000168022
Tripterygium wilfordii NC_052237.1 4 CH_twi_253 3 3 0.000168022
Tripterygium wilfordii NC_052251.1 4 CH_twi_54 5 5 0.000000000432267
Utricularia gibba unitig_26 4 CH_ugi_127 2 2 0.000492287
Zea mays 3 4 CH_zma_334 2 2 0.000766969

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001