Functional clusters

Information

  • Type Gene Ontology
  • Description rRNA (pseudouridine) methyltransferase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 3 CH_arhy_354 3 5 0.00000221792
Camellia sinensis var. sinensis Chr10 3 CH_camsi_306 3 11 0.000000520324
Cucumis melo chr06 3 CH_cme_236 2 2 0.000400267
Chenopodium quinoa C_Quinoa_Scaffold_3163 3 CH_cqu_232 3 4 0.00000296301
Durio zibethinus NW_019167937.1 3 CH_dzi_265 2 2 0.000278093
Glycine max Gm17 3 CH_gma_425 2 2 0.000379557
Lupinus albus Lalb_Chr02 3 CH_lal_231 2 2 0.0000524824
Lonicera japonica GWHAAZE00000001 3 CH_lonja_543 2 2 0.000598874
Malus domestica Chr02 3 CH_mdo_700 2 2 0.000796344
Malus domestica Chr03 3 CH_mdo_701 2 2 0.000796344
Prunus persica Pp01 3 CH_ppe_199 3 4 0.000000133547
Rhododendron simsii chr09 3 CH_rsi_497 2 2 0.000645307
Salix brachista GWHAAZH00000016 3 CH_sbr_171 3 6 0.0000023818
Selenicereus undatus Scaffold_33678 3 CH_sun_142 2 2 0.000217992
Theobroma cacao Chromosome_7 3 CH_tca_184 3 4 0.00000112629
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 4 CH_arhy_354 3 5 0.00000221792
Camellia sinensis var. sinensis Chr10 4 CH_camsi_306 3 11 0.000000520324
Cucumis melo chr06 4 CH_cme_236 2 2 0.000400267
Chenopodium quinoa C_Quinoa_Scaffold_3163 4 CH_cqu_232 3 4 0.00000296301
Durio zibethinus NW_019167937.1 4 CH_dzi_265 2 2 0.000278093
Glycine max Gm17 4 CH_gma_425 2 2 0.000379557
Lupinus albus Lalb_Chr02 4 CH_lal_231 2 2 0.0000524824
Lonicera japonica GWHAAZE00000001 4 CH_lonja_543 2 2 0.000598874
Malus domestica Chr02 4 CH_mdo_700 2 2 0.000796344
Malus domestica Chr03 4 CH_mdo_701 2 2 0.000796344
Prunus persica Pp01 4 CH_ppe_199 3 4 0.000000133547
Rhododendron simsii chr09 4 CH_rsi_497 2 2 0.000645307
Salix brachista GWHAAZH00000016 4 CH_sbr_171 3 6 0.0000023818
Selenicereus undatus Scaffold_33678 4 CH_sun_142 2 2 0.000217992
Theobroma cacao Chromosome_7 4 CH_tca_184 3 4 0.00000112629

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001