Functional clusters

Information

  • Type Gene Ontology
  • Description RNA ligase (ATP) activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 3 CH_aag_25 4 6 0.00000000011631
Acer truncatum chr3 3 CH_acertr_310 2 2 0.000070497
Arabidopsis lyrata scaffold_7 3 CH_aly_288 2 2 0.000396027
Aquilegia oxysepala CHR03 3 CH_aox_235 2 2 0.000240597
Capsicum annuum PGAv.1.6.scaffold352 3 CH_can_380 2 2 0.000247831
Ceratophyllum demersum 5 3 CH_cde_131 2 3 0.000236929
Carica papaya supercontig_139 3 CH_cpa_258 2 4 0.000570342
Davidia involucrata GWHABJS00000009 3 CH_din_353 2 3 0.000450094
Fragaria x ananassa Fvb4-2 3 CH_fan_462 2 2 0.000388576
Papaver somniferum NW_020632152.1 3 CH_pso_557 2 2 0.000225294
Quercus lobata 11 3 CH_qlo_743 3 29 0.0000583722
Sapria himalayana scaffold59_3208471 3 CH_shi_64 3 6 0.0000000980824
Trifolium pratense Tp57577_TGAC_v2_LG4 3 CH_tpr_329 2 2 0.000454184
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_106 3 3 0.000000129529
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_394 2 2 0.000929238
Vanilla planifolia CM028154.1 3 CH_vpl_205 2 2 0.000073888
Anthoceros agrestis Sc2ySwM_117 4 CH_aag_25 4 6 0.00000000011631
Acer truncatum chr3 4 CH_acertr_310 2 2 0.000070497
Arabidopsis lyrata scaffold_7 4 CH_aly_288 2 2 0.000396027
Aquilegia oxysepala CHR03 4 CH_aox_235 2 2 0.000240597
Capsicum annuum PGAv.1.6.scaffold352 4 CH_can_380 2 2 0.000247831
Ceratophyllum demersum 5 4 CH_cde_131 2 3 0.000236929
Carica papaya supercontig_139 4 CH_cpa_258 2 4 0.000570342
Davidia involucrata GWHABJS00000009 4 CH_din_353 2 3 0.000450094
Fragaria x ananassa Fvb4-2 4 CH_fan_462 2 2 0.000388576
Papaver somniferum NW_020632152.1 4 CH_pso_557 2 2 0.000225294
Quercus lobata 11 4 CH_qlo_743 3 29 0.0000583722
Sapria himalayana scaffold59_3208471 4 CH_shi_64 3 6 0.0000000980824
Trifolium pratense Tp57577_TGAC_v2_LG4 4 CH_tpr_329 2 2 0.000454184
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_106 3 3 0.000000129529
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_394 2 2 0.000929238
Vanilla planifolia CM028154.1 4 CH_vpl_205 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001