Functional clusters

Information

  • Type Gene Ontology
  • Description secondary metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Prasinoderma coloniale Chr14 3 CH_pco_7 4 6 0.0004103
Solanum pennellii Spenn-ch01 3 CH_spe_359 8 56 0.000182026
Vigna mungo CM024069.1 3 CH_vmu_324 4 5 0.000909754
Prasinoderma coloniale Chr14 4 CH_pco_7 4 6 0.0004103
Solanum pennellii Spenn-ch01 4 CH_spe_359 8 56 0.000182026
Vigna mungo CM024069.1 4 CH_vmu_324 4 5 0.000909754

Available child term results

Ontology identifier Description Number of clusters
GO:0009407 toxin catabolic process 88
GO:0009759 indole glucosinolate biosynthetic process 20
GO:0009805 coumarin biosynthetic process 6
GO:0009807 lignan biosynthetic process 14
GO:0009808 lignin metabolic process 6
GO:0009809 lignin biosynthetic process 24
GO:0010023 proanthocyanidin biosynthetic process 12
GO:0010115 regulation of abscisic acid biosynthetic process 12
GO:0010116 positive regulation of abscisic acid biosynthetic process 6
GO:0010371 regulation of gibberellin biosynthetic process 32
GO:0010372 positive regulation of gibberellin biosynthetic process 2
GO:0019760 glucosinolate metabolic process 4
GO:0019761 glucosinolate biosynthetic process 2
GO:0019762 glucosinolate catabolic process 12
GO:0030639 polyketide biosynthetic process 6
GO:0033506 glucosinolate biosynthetic process from homomethionine 4
GO:0042343 indole glucosinolate metabolic process 8
GO:0042344 indole glucosinolate catabolic process 2
GO:0043386 mycotoxin biosynthetic process 2
GO:0045122 aflatoxin biosynthetic process 10
GO:0046274 lignin catabolic process 2
GO:0046938 phytochelatin biosynthetic process 52
GO:0051502 diterpene phytoalexin biosynthetic process 16
GO:0090359 negative regulation of abscisic acid biosynthetic process 4
GO:0090431 alkyl caffeate ester biosynthetic process 6
GO:0106146 sideretin biosynthesis 14
GO:0106147 fraxetin biosynthesis 10
GO:1900706 positive regulation of siderophore biosynthetic process 96
GO:1901430 positive regulation of syringal lignin biosynthetic process 14
GO:1901599 (-)-pinoresinol biosynthetic process 70
GO:2000029 regulation of proanthocyanidin biosynthetic process 2
GO:2000762 regulation of phenylpropanoid metabolic process 28

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001