Functional clusters
Information
- Type Gene Ontology
- Description lignin metabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Chara braunii | BFEA01000155 | 3 | CH_cbr_42 | 5 | 19 | 0.000000227132 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_705 | 4 | 5 | 0.000069316 |
| Zea mays | 7 | 3 | CH_zma_348 | 4 | 11 | 0.000900389 |
| Chara braunii | BFEA01000155 | 4 | CH_cbr_42 | 5 | 19 | 0.000000227132 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_705 | 4 | 5 | 0.000069316 |
| Zea mays | 7 | 4 | CH_zma_348 | 4 | 11 | 0.000900389 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0009809 | lignin biosynthetic process | 24 |
| GO:0046274 | lignin catabolic process | 2 |
| GO:1901430 | positive regulation of syringal lignin biosynthetic process | 14 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |