Functional clusters
Information
- Type Gene Ontology
- Description proanthocyanidin biosynthetic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Medicago truncatula | chr3 | 3 | CH_mtr_714 | 2 | 2 | 0.000616295 |
| Populus trichocarpa | Chr18 | 3 | CH_ptr_269 | 3 | 5 | 0.00000826551 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 3 | CH_rch_771 | 2 | 2 | 0.00083717 |
| Salix brachista | GWHAAZH00000005 | 3 | CH_sbr_292 | 2 | 2 | 0.000189042 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_114 | 9 | 13 | 1.12375e-20 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_632 | 4 | 5 | 0.000000175498 |
| Medicago truncatula | chr3 | 4 | CH_mtr_714 | 2 | 2 | 0.000616295 |
| Populus trichocarpa | Chr18 | 4 | CH_ptr_269 | 3 | 5 | 0.00000826551 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 4 | CH_rch_771 | 2 | 2 | 0.00083717 |
| Salix brachista | GWHAAZH00000005 | 4 | CH_sbr_292 | 2 | 2 | 0.000189042 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_114 | 9 | 13 | 1.12375e-20 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_632 | 4 | 5 | 0.000000175498 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:2000029 | regulation of proanthocyanidin biosynthetic process | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |