Functional clusters
Information
- Type Gene Ontology
- Description toxin catabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 3 | CH_aar_130 | 3 | 3 | 0.0000252709 |
| Arabidopsis lyrata | scaffold_1 | 3 | CH_aly_194 | 3 | 3 | 0.00005513 |
| Arabidopsis lyrata | scaffold_1 | 3 | CH_aly_86 | 4 | 4 | 0.0000000636837 |
| Avicennia marina | ScioBoG_18782_HRSCAF_18867 | 3 | CH_ama_37 | 3 | 3 | 0.00000624499 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_136 | 5 | 15 | 0.0000000206954 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_325 | 3 | 3 | 0.0000186893 |
| Arabidopsis thaliana | Chr2 | 3 | CH_ath_35 | 7 | 14 | 0.0000000000000079724 |
| Arabidopsis thaliana | Chr5 | 3 | CH_ath_404 | 3 | 5 | 0.0000747218 |
| Brassica carinata | ChrB06 | 3 | CH_bca_523 | 3 | 4 | 0.0000504946 |
| Brassica oleracea | C6 | 3 | CH_bol_103 | 4 | 6 | 0.000000047851 |
| Brassica oleracea | C5 | 3 | CH_bol_221 | 3 | 3 | 0.0000158337 |
| Brassica rapa | A04 | 3 | CH_bra_230 | 3 | 5 | 0.000252363 |
| Brassica rapa | A07 | 3 | CH_bra_66 | 4 | 4 | 0.000000019526 |
| Camellia sinensis var. sinensis | Chr4 | 3 | CH_camsi_384 | 3 | 3 | 0.0000041949 |
| Camellia sinensis var. sinensis | Chr14 | 3 | CH_camsi_450 | 3 | 4 | 0.000016774 |
| Cannabis sativa | NC_044371.1 | 3 | CH_cansat_172 | 3 | 3 | 0.0000148762 |
| Cannabis sativa | NC_044378.1 | 3 | CH_cansat_30 | 7 | 13 | 0.00000000000000519271 |
| Citrus clementina | scaffold_3 | 3 | CH_ccl_431 | 3 | 10 | 0.000984939 |
| Cardamine hirsuta | Chr1 | 3 | CH_chi_208 | 3 | 3 | 0.0000511702 |
| Cucumis melo | chr01 | 3 | CH_cme_62 | 4 | 4 | 0.00000000431572 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2244 | 3 | CH_cqu_138 | 5 | 21 | 0.000000061656 |
| Capsella rubella | scaffold_1 | 3 | CH_cru_117 | 4 | 4 | 0.0000000964578 |
| Daucus carota | DCARv2_Chr3 | 3 | CH_dca_19 | 6 | 6 | 4.40891e-16 |
| Durio zibethinus | NW_019167993.1 | 3 | CH_dzi_186 | 3 | 4 | 0.000022819 |
| Durio zibethinus | NW_019168492.1 | 3 | CH_dzi_215 | 3 | 5 | 0.0000570264 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_191 | 3 | 4 | 0.00000439671 |
| Erythranthe guttata | scaffold_4 | 3 | CH_egut_208 | 3 | 3 | 0.00000445382 |
| Helianthus annuus | HanXRQChr13 | 3 | CH_han_386 | 3 | 3 | 0.0000090942 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_339 | 3 | 3 | 0.0000139878 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 3 | CH_lsa_10 | 10 | 11 | 6.80318e-26 |
| Magnolia biondii | Chr19 | 3 | CH_mbi_277 | 4 | 10 | 0.00000126305 |
| Malus domestica | Chr04 | 3 | CH_mdo_319 | 3 | 3 | 0.00000496124 |
| Manihot esculenta | Chromosome09 | 3 | CH_mes_23 | 9 | 9 | 2.74648e-24 |
| Prunus persica | Pp02 | 3 | CH_ppe_264 | 3 | 3 | 0.0000111018 |
| Papaver somniferum | NC_039361.1 | 3 | CH_pso_34 | 7 | 8 | 1.53565e-18 |
| Papaver somniferum | NC_039365.1 | 3 | CH_pso_68 | 6 | 9 | 0.000000000000042069 |
| Schrenkiella parvula | ch1-1 | 3 | CH_spa_101 | 3 | 3 | 0.0000304633 |
| Schrenkiella parvula | ch1-1 | 3 | CH_spa_102 | 3 | 3 | 0.0000304633 |
| Schrenkiella parvula | ch5-7 | 3 | CH_spa_135 | 3 | 4 | 0.000121758 |
| Theobroma cacao | Chromosome_2 | 3 | CH_tca_228 | 3 | 4 | 0.0000180162 |
| Tarenaya hassleriana | NW_010969548.1 | 3 | CH_tha_84 | 3 | 3 | 0.0000214056 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 3 | CH_tpr_141 | 3 | 3 | 0.00000584491 |
| Tripterygium wilfordii | NC_052237.1 | 3 | CH_twi_173 | 3 | 3 | 0.0000121383 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_43 | 5 | 5 | 0.0000000000147302 |
| Aethionema arabicum | LG-1 | 4 | CH_aar_130 | 3 | 3 | 0.0000252709 |
| Arabidopsis lyrata | scaffold_1 | 4 | CH_aly_194 | 3 | 3 | 0.00005513 |
| Arabidopsis lyrata | scaffold_1 | 4 | CH_aly_86 | 4 | 4 | 0.0000000636837 |
| Avicennia marina | ScioBoG_18782_HRSCAF_18867 | 4 | CH_ama_37 | 3 | 3 | 0.00000624499 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_136 | 5 | 15 | 0.0000000206954 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_325 | 3 | 3 | 0.0000186893 |
| Arabidopsis thaliana | Chr2 | 4 | CH_ath_35 | 7 | 14 | 0.0000000000000079724 |
| Arabidopsis thaliana | Chr5 | 4 | CH_ath_404 | 3 | 5 | 0.0000747218 |
| Brassica carinata | ChrB06 | 4 | CH_bca_523 | 3 | 4 | 0.0000504946 |
| Brassica oleracea | C6 | 4 | CH_bol_103 | 4 | 6 | 0.000000047851 |
| Brassica oleracea | C5 | 4 | CH_bol_221 | 3 | 3 | 0.0000158337 |
| Brassica rapa | A04 | 4 | CH_bra_230 | 3 | 5 | 0.000252363 |
| Brassica rapa | A07 | 4 | CH_bra_66 | 4 | 4 | 0.000000019526 |
| Camellia sinensis var. sinensis | Chr4 | 4 | CH_camsi_384 | 3 | 3 | 0.0000041949 |
| Camellia sinensis var. sinensis | Chr14 | 4 | CH_camsi_450 | 3 | 4 | 0.000016774 |
| Cannabis sativa | NC_044371.1 | 4 | CH_cansat_172 | 3 | 3 | 0.0000148762 |
| Cannabis sativa | NC_044378.1 | 4 | CH_cansat_30 | 7 | 13 | 0.00000000000000519271 |
| Citrus clementina | scaffold_3 | 4 | CH_ccl_431 | 3 | 10 | 0.000984939 |
| Cardamine hirsuta | Chr1 | 4 | CH_chi_208 | 3 | 3 | 0.0000511702 |
| Cucumis melo | chr01 | 4 | CH_cme_62 | 4 | 4 | 0.00000000431572 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2244 | 4 | CH_cqu_138 | 5 | 21 | 0.000000061656 |
| Capsella rubella | scaffold_1 | 4 | CH_cru_117 | 4 | 4 | 0.0000000964578 |
| Daucus carota | DCARv2_Chr3 | 4 | CH_dca_19 | 6 | 6 | 4.40891e-16 |
| Durio zibethinus | NW_019167993.1 | 4 | CH_dzi_186 | 3 | 4 | 0.000022819 |
| Durio zibethinus | NW_019168492.1 | 4 | CH_dzi_215 | 3 | 5 | 0.0000570264 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_191 | 3 | 4 | 0.00000439671 |
| Erythranthe guttata | scaffold_4 | 4 | CH_egut_208 | 3 | 3 | 0.00000445382 |
| Helianthus annuus | HanXRQChr13 | 4 | CH_han_386 | 3 | 3 | 0.0000090942 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_339 | 3 | 3 | 0.0000139878 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 4 | CH_lsa_10 | 10 | 11 | 6.80318e-26 |
| Magnolia biondii | Chr19 | 4 | CH_mbi_277 | 4 | 10 | 0.00000126305 |
| Malus domestica | Chr04 | 4 | CH_mdo_319 | 3 | 3 | 0.00000496124 |
| Manihot esculenta | Chromosome09 | 4 | CH_mes_23 | 9 | 9 | 2.74648e-24 |
| Prunus persica | Pp02 | 4 | CH_ppe_264 | 3 | 3 | 0.0000111018 |
| Papaver somniferum | NC_039361.1 | 4 | CH_pso_34 | 7 | 8 | 1.53565e-18 |
| Papaver somniferum | NC_039365.1 | 4 | CH_pso_68 | 6 | 9 | 0.000000000000042069 |
| Schrenkiella parvula | ch1-1 | 4 | CH_spa_101 | 3 | 3 | 0.0000304633 |
| Schrenkiella parvula | ch1-1 | 4 | CH_spa_102 | 3 | 3 | 0.0000304633 |
| Schrenkiella parvula | ch5-7 | 4 | CH_spa_135 | 3 | 4 | 0.000121758 |
| Theobroma cacao | Chromosome_2 | 4 | CH_tca_228 | 3 | 4 | 0.0000180162 |
| Tarenaya hassleriana | NW_010969548.1 | 4 | CH_tha_84 | 3 | 3 | 0.0000214056 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 4 | CH_tpr_141 | 3 | 3 | 0.00000584491 |
| Tripterygium wilfordii | NC_052237.1 | 4 | CH_twi_173 | 3 | 3 | 0.0000121383 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_43 | 5 | 5 | 0.0000000000147302 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |