Functional clusters

Information

  • Type Gene Ontology
  • Description positive regulation of syringal lignin biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr1 3 CH_acertr_387 2 2 0.000211491
Amborella trichopoda AmTr_v1.0_scaffold00007 3 CH_atr_256 2 2 0.000238322
Davidia involucrata GWHABJS00000009 3 CH_din_354 2 3 0.000450094
Medicago truncatula chr3 3 CH_mtr_660 2 3 0.000369764
Nicotiana tabacum Nitab4.5_0000263 3 CH_nta_115 2 2 0.000329182
Trifolium pratense Tp57577_TGAC_v2_LG3 3 CH_tpr_72 3 3 0.0000000343818
Zea mays 4 3 CH_zma_235 2 2 0.000153394
Acer truncatum chr1 4 CH_acertr_387 2 2 0.000211491
Amborella trichopoda AmTr_v1.0_scaffold00007 4 CH_atr_256 2 2 0.000238322
Davidia involucrata GWHABJS00000009 4 CH_din_354 2 3 0.000450094
Medicago truncatula chr3 4 CH_mtr_660 2 3 0.000369764
Nicotiana tabacum Nitab4.5_0000263 4 CH_nta_115 2 2 0.000329182
Trifolium pratense Tp57577_TGAC_v2_LG3 4 CH_tpr_72 3 3 0.0000000343818
Zea mays 4 4 CH_zma_235 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001