Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Ah.01g011550 Amaranthus hybridus
Ah.05g176830 Amaranthus hybridus
Ah.06g193280 Amaranthus hybridus
Ah.09g227320 Amaranthus hybridus
Ah.10g027590 Amaranthus hybridus
Ah.10g027890 Amaranthus hybridus
Ah.10g028290 Amaranthus hybridus
AL2G20930 Arabidopsis lyrata
Aqoxy2G02023 Aquilegia oxysepala
Aqoxy2G03127 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06L9FM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0VTC5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BDU9B8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C0PF0R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D45LZI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HTJ4F6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J2QZCX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L2XNS6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJ9S15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SF5CDY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V1C6S4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WNC9JI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XEUA7Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YHLY7F Arachis hypogaea
ATCG00190 Arabidopsis thaliana
ATR0033G020 Amborella trichopoda
ATR0227G001 Amborella trichopoda
ATR0329G029 Amborella trichopoda
ATR0427G001 Amborella trichopoda
ATR0624G114 Amborella trichopoda
Atru.chr13.1915 Acer truncatum
Atru.chr13.1916 Acer truncatum
Atru.chr13.1917 Acer truncatum
Atru.chr9.571 Acer truncatum
AUR62024083 Chenopodium quinoa
AUR62030124 Chenopodium quinoa
AUR62039622 Chenopodium quinoa
AUR62041878 Chenopodium quinoa
AUR62042492 Chenopodium quinoa
AUR62044461 Chenopodium quinoa
BcaC02g10983 Brassica carinata
BcaC05g28800 Brassica carinata
BcaC09g49582 Brassica carinata
BNapus_Darmor_BZH_scaffold_234p00040 Brassica napus
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus
BolC1t03450H Brassica oleracea
BolC1t03451H Brassica oleracea
BolC7t41731H Brassica oleracea
BolC7t41732H Brassica oleracea
BolSC28t60417H Brassica oleracea
BolSC37t60764H Brassica oleracea
BolSC37t60765H Brassica oleracea
BolSC44t60849H Brassica oleracea
BolSC44t60850H Brassica oleracea
BolSC45t60873H Brassica oleracea
BolSC45t60874H Brassica oleracea
BolSC45t60940H Brassica oleracea
BolSC46t60987H Brassica oleracea
BolSC49t61196H Brassica oleracea
BraSC140t45585Z Brassica rapa
BraSC140t45600Z Brassica rapa
BraSC140t45606Z Brassica rapa
BraSC151t45701Z Brassica rapa
BraSC151t45704Z Brassica rapa
BraSC151t45705Z Brassica rapa
BraSC177t45754Z Brassica rapa
BraSC179t45794Z Brassica rapa
BraSC224t45816Z Brassica rapa
BraSC25t45880Z Brassica rapa
BraSC48t46253Z Brassica rapa
BraSC58t46408Z Brassica rapa
BraSC58t46409Z Brassica rapa
BraSC58t46479Z Brassica rapa
C01p34840 Brassica napus
C01p34920 Brassica napus
C04p22650 Brassica napus
C04p22660 Brassica napus
CAN.G100.43 Capsicum annuum
CAN.G1082.2 Capsicum annuum
CAN.G1185.15 Capsicum annuum
CAN.G1243.1 Capsicum annuum
CAN.G1288.12 Capsicum annuum
CAN.G1439.2 Capsicum annuum
CAN.G156.7 Capsicum annuum
CAN.G1576.2 Capsicum annuum
CAN.G1648.7 Capsicum annuum
CAN.G1648.8 Capsicum annuum
CAN.G1738.7 Capsicum annuum
CAN.G219.19 Capsicum annuum
CAN.G219.20 Capsicum annuum
CAN.G2251.2 Capsicum annuum
CAN.G358.145 Capsicum annuum
CAN.G386.8 Capsicum annuum
CAN.G398.13 Capsicum annuum
CAN.G43.1 Capsicum annuum
CAN.G511.5 Capsicum annuum
CAN.G511.6 Capsicum annuum
CAN.G552.5 Capsicum annuum
CAN.G566.29 Capsicum annuum
CAN.G8.5 Capsicum annuum
CAN.G892.2 Capsicum annuum
CAN.G939.16 Capsicum annuum
CAN.G939.17 Capsicum annuum
CARHR152830 Cardamine hirsuta
CARHR181330 Cardamine hirsuta
CARHR281930 Cardamine hirsuta
Ca_05611_v3 Cicer arietinum L.
CBR_g85198 Chara braunii
CDE02G0866 Ceratophyllum demersum
Cfa023022 Carpinus fangiana
ClCG01G011250 Citrullus lanatus
ClCG07G004170 Citrullus lanatus
ClCG07G006760 Citrullus lanatus
ClCG07G012030 Citrullus lanatus
ClCG10G006060 Citrullus lanatus
ClCG11G013030 Citrullus lanatus
COL.COLO4_00519 Corchorus olitorius
COL.COLO4_00592 Corchorus olitorius
COL.COLO4_00654 Corchorus olitorius
COL.COLO4_00815 Corchorus olitorius
COL.COLO4_01277 Corchorus olitorius
COL.COLO4_01626 Corchorus olitorius
COL.COLO4_01673 Corchorus olitorius
COL.COLO4_02269 Corchorus olitorius
COL.COLO4_02629 Corchorus olitorius
COL.COLO4_02988 Corchorus olitorius
COL.COLO4_03105 Corchorus olitorius
COL.COLO4_03123 Corchorus olitorius
COL.COLO4_03179 Corchorus olitorius
COL.COLO4_19556 Corchorus olitorius
Cpa.g.c45563 Carica papaya
Cpa.g.sc3766.2 Carica papaya
CsaV3_UNG208330 Cucumis sativus L.
CsaV3_UNG208340 Cucumis sativus L.
CSS0046430 Camellia sinensis var. sinensis
CSS0049631 Camellia sinensis var. sinensis
DCAR_010289 Daucus carota
DCAR_010535 Daucus carota
DCAR_026656 Daucus carota
DCAR_032476 Daucus carota
ECA054G0003 Erigeron canadensis
ECA169G0009 Erigeron canadensis
EL10Ac1g01786 Beta vulgaris
EL10Ac1g01787 Beta vulgaris
EL10Ac4g08686 Beta vulgaris
EL10Ac4g09240 Beta vulgaris
EL10Ac5g12023 Beta vulgaris
EL10Ac6g14625 Beta vulgaris
EL10Ac7g17222 Beta vulgaris
EL10Ac9g20735 Beta vulgaris
EL10As12g24016 Beta vulgaris
EL10As4g23395 Beta vulgaris
Eucgr.B02475 Eucalyptus grandis
Eucgr.C02946 Eucalyptus grandis
Eucgr.E02520 Eucalyptus grandis
Eucgr.H04258 Eucalyptus grandis
Gohir.A01G160850 Gossypium hirsutum
Gohir.A04G053721 Gossypium hirsutum
Gohir.A04G065185 Gossypium hirsutum
Gohir.A04G065470 Gossypium hirsutum
Gohir.A07G155805 Gossypium hirsutum
Gohir.D01G029500 Gossypium hirsutum
Gohir.D01G151850 Gossypium hirsutum
Gohir.D02G042933 Gossypium hirsutum
Gohir.D02G109701 Gossypium hirsutum
Gohir.D05G027450 Gossypium hirsutum
Gohir.D07G007250 Gossypium hirsutum
Gohir.D07G126525 Gossypium hirsutum
Gohir.D08G095620 Gossypium hirsutum
Gohir.D12G077902 Gossypium hirsutum
Gohir.D12G085301 Gossypium hirsutum
Gorai.001G006900 Gossypium raimondii
Gorai.001G136600 Gossypium raimondii
Gorai.002G152500 Gossypium raimondii
Gorai.002G188200 Gossypium raimondii
Gorai.004G101400 Gossypium raimondii
Gorai.004G252200 Gossypium raimondii
Gorai.005G047300 Gossypium raimondii
Gorai.005G123700 Gossypium raimondii
Gorai.005G167700 Gossypium raimondii
Gorai.005G236000 Gossypium raimondii
Gorai.007G168000 Gossypium raimondii
Gorai.008G086500 Gossypium raimondii
Gorai.008G095600 Gossypium raimondii
Gorai.009G027600 Gossypium raimondii
Gorai.011G273200 Gossypium raimondii
GSVIVG01035251001 Vitis vinifera
HanXRQChr00c0165g0572151 Helianthus annuus
HanXRQChr00c0165g0572161 Helianthus annuus
HanXRQChr00c0994g0578201 Helianthus annuus
HanXRQChr00c0994g0578211 Helianthus annuus
HanXRQChr05g0139691 Helianthus annuus
HanXRQChr05g0139701 Helianthus annuus
HanXRQChr11g0326591 Helianthus annuus
HanXRQChr11g0326601 Helianthus annuus
HanXRQChr11g0340031 Helianthus annuus
HanXRQChr11g0340041 Helianthus annuus
HanXRQChr11g0340051 Helianthus annuus
HanXRQChr13g0417241 Helianthus annuus
HanXRQChr13g0417251 Helianthus annuus
HanXRQChr16g0503971 Helianthus annuus
HanXRQCPg0579801 Helianthus annuus
Haze_26635 Corylus avellana
Hma1.2p1_0033F.1_g020700 Hydrangea macrophylla
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla
Hma1.2p1_0191F.1_g083380 Hydrangea macrophylla
HPP92_028444 Vanilla planifolia
Hund04027 Selenicereus undatus
Hund08566 Selenicereus undatus
Hund18042 Selenicereus undatus
Hund19314 Selenicereus undatus
Hund23975 Selenicereus undatus
Hund25935 Selenicereus undatus
Hund27452 Selenicereus undatus
Hund27562 Selenicereus undatus
Hund27608 Selenicereus undatus
Hund27642 Selenicereus undatus
Hund27656 Selenicereus undatus
Hund27670 Selenicereus undatus
Hund27699 Selenicereus undatus
Hund27744 Selenicereus undatus
Hund27763 Selenicereus undatus
Hund27764 Selenicereus undatus
Hund27805 Selenicereus undatus
Hund27822 Selenicereus undatus
Hund27840 Selenicereus undatus
Hund27867 Selenicereus undatus
Hund27916 Selenicereus undatus
Hund27928 Selenicereus undatus
Hund27929 Selenicereus undatus
Hund27944 Selenicereus undatus
Hund27998 Selenicereus undatus
Hund28018 Selenicereus undatus
Hund28026 Selenicereus undatus
Hund28058 Selenicereus undatus
Hund28085 Selenicereus undatus
Hund28123 Selenicereus undatus
Hund28131 Selenicereus undatus
Hund28139 Selenicereus undatus
Hund28140 Selenicereus undatus
Hund28154 Selenicereus undatus
Hund28163 Selenicereus undatus
Hund28189 Selenicereus undatus
Hund28208 Selenicereus undatus
Hund28237 Selenicereus undatus
Hund28247 Selenicereus undatus
Hund28260 Selenicereus undatus
Hund28279 Selenicereus undatus
Hund28280 Selenicereus undatus
Hund28292 Selenicereus undatus
Hund28336 Selenicereus undatus
Hund28351 Selenicereus undatus
Hund28353 Selenicereus undatus
Hund28372 Selenicereus undatus
Hund28385 Selenicereus undatus
Hund28398 Selenicereus undatus
Hund28413 Selenicereus undatus
Hund28500 Selenicereus undatus
Hund28555 Selenicereus undatus
Hund28556 Selenicereus undatus
Hund28557 Selenicereus undatus
Hund28577 Selenicereus undatus
Hund28578 Selenicereus undatus
Hund28618 Selenicereus undatus
Hund28642 Selenicereus undatus
Hund28686 Selenicereus undatus
Hund28697 Selenicereus undatus
Hund28702 Selenicereus undatus
Hund28715 Selenicereus undatus
Hund28806 Selenicereus undatus
Hund28824 Selenicereus undatus
Hund28835 Selenicereus undatus
Hund28904 Selenicereus undatus
Hund28914 Selenicereus undatus
Hund28984 Selenicereus undatus
Hund29113 Selenicereus undatus
Hund29197 Selenicereus undatus
Hund29207 Selenicereus undatus
Hund29340 Selenicereus undatus
Hund29354 Selenicereus undatus
Hund29389 Selenicereus undatus
Hund29478 Selenicereus undatus
Hund29486 Selenicereus undatus
Hund29645 Selenicereus undatus
Hund29738 Selenicereus undatus
Hund29745 Selenicereus undatus
Hund29775 Selenicereus undatus
Hund29988 Selenicereus undatus
Hund30018 Selenicereus undatus
Hund30063 Selenicereus undatus
Hund30538 Selenicereus undatus
Hund30961 Selenicereus undatus
Hund31448 Selenicereus undatus
Hund31454 Selenicereus undatus
Lalb_Chr07g0192491 Lupinus albus
Lalb_Chr07g0192501 Lupinus albus
Lalb_Chr07g0192511 Lupinus albus
Lalb_Chr07g0192761 Lupinus albus
Lalb_Chr07g0192771 Lupinus albus
Lalb_Chr07g0192781 Lupinus albus
Lalb_Chr07g0192791 Lupinus albus
Lalb_Chr09g0335411 Lupinus albus
Lalb_Chr24g0400911 Lupinus albus
Lj2A1224G98 Lonicera japonica
Lj2A1227T104 Lonicera japonica
Lj2A1238G119 Lonicera japonica
Lj2A1239T191 Lonicera japonica
Lj2A1239T199 Lonicera japonica
Lj2C1237G9 Lonicera japonica
Lj2C1239G18 Lonicera japonica
LjContig00318g0016482 Lotus japonicus
LjContig00489g0016354 Lotus japonicus
Lsat_1_v5_gn_0_38241 Lactuca sativa
Lsat_1_v5_gn_1_118620 Lactuca sativa
Lsat_1_v5_gn_1_92840 Lactuca sativa
Lsat_1_v5_gn_2_89900 Lactuca sativa
Lsat_1_v5_gn_5_145160 Lactuca sativa
Lsat_1_v5_gn_7_76941 Lactuca sativa
Lsat_1_v5_gn_7_95881 Lactuca sativa
Lsat_1_v5_gn_8_1800 Lactuca sativa
Lsat_1_v5_gn_8_76561 Lactuca sativa
Manes.01G031001 Manihot esculenta
Manes.04G060056 Manihot esculenta
Mapoly0019s0087 Marchantia polymorpha
Mapoly0091s0005 Marchantia polymorpha
Mapoly0091s0006 Marchantia polymorpha
MD01G1093300 Malus domestica
MD16G1169300 Malus domestica
Medtr0002s0510 Medicago truncatula
Medtr0265s0030 Medicago truncatula
Medtr0552s0020 Medicago truncatula
Medtr1g058960 Medicago truncatula
Medtr2g040120 Medicago truncatula
Medtr4g021033 Medicago truncatula
Medtr4g039510 Medicago truncatula
Medtr4g051130 Medicago truncatula
Medtr4g055180 Medicago truncatula
Medtr5g005060 Medicago truncatula
Medtr5g085695 Medicago truncatula
Medtr5g088810 Medicago truncatula
Medtr6g042920 Medicago truncatula
Medtr6g061700 Medicago truncatula
Medtr7g052900 Medicago truncatula
Medtr7g052990 Medicago truncatula
Medtr7g077330 Medicago truncatula
MELO3C000332.2 Cucumis melo
MELO3C027101.2 Cucumis melo
Migut.D01344 Erythranthe guttata
Migut.D01417 Erythranthe guttata
Migut.E00860 Erythranthe guttata
Migut.H02461 Erythranthe guttata
Nitab4.5_0000007g0290 Nicotiana tabacum
Nitab4.5_0000029g0010 Nicotiana tabacum
Nitab4.5_0000095g0040 Nicotiana tabacum
Nitab4.5_0000172g0250 Nicotiana tabacum
Nitab4.5_0000428g0240 Nicotiana tabacum
Nitab4.5_0000611g0230 Nicotiana tabacum
Nitab4.5_0000774g0020 Nicotiana tabacum
Nitab4.5_0001034g0040 Nicotiana tabacum
Nitab4.5_0001468g0040 Nicotiana tabacum
Nitab4.5_0001715g0110 Nicotiana tabacum
Nitab4.5_0001715g0120 Nicotiana tabacum
Nitab4.5_0001715g0130 Nicotiana tabacum
Nitab4.5_0002474g0010 Nicotiana tabacum
Nitab4.5_0003241g0020 Nicotiana tabacum
Nitab4.5_0004372g0010 Nicotiana tabacum
Nitab4.5_0007104g0040 Nicotiana tabacum
Nn020s41502 Nelumbo nucifera
Nn082s42674 Nelumbo nucifera
Nn1g02826 Nelumbo nucifera
Oeu010678.1 Olea europaea
Oeu012828.1 Olea europaea
Oeu041189.1 Olea europaea
Oeu054046.1 Olea europaea
Peaxi162Scf00348g00126 Petunia axillaris
Peaxi162Scf00465g00043 Petunia axillaris
Peaxi162Scf00608g00014 Petunia axillaris
Peaxi162Scf00921g00231 Petunia axillaris
Peaxi162Scf03779g00016 Petunia axillaris
PGR111G0080 Punica granatum
PGSC0003DMG401017663 Solanum tuberosum
PGSC0003DMG402017663 Solanum tuberosum
Phvul.005G048600 Phaseolus vulgaris
Phvul.009G188333 Phaseolus vulgaris
Phvul.010G056233 Phaseolus vulgaris
Potri.013G142232 Populus trichocarpa
Pp3c19_1080 Physcomitrium patens
Pp3c19_13000 Physcomitrium patens
Psat0s1150g0040 Pisum sativum
Psat0s4841g0080 Pisum sativum
Psat0s5655g0160 Pisum sativum
Psat0s6357g0040 Pisum sativum
Psat0s6638g0160 Pisum sativum
Psat1g084320 Pisum sativum
Psat1g084360 Pisum sativum
Psat3g095080 Pisum sativum
Psat3g186440 Pisum sativum
Psat4g147960 Pisum sativum
Psat5g173400 Pisum sativum
Psat6g035440 Pisum sativum
Psat7g026840 Pisum sativum
Psat7g064800 Pisum sativum
Psat7g064840 Pisum sativum
Psat7g176880 Pisum sativum
Psat7g199200 Pisum sativum
PSO548G0026 Papaver somniferum
QL11p015550 Quercus lobata
RcHm_v2.0_CPg0502401 Rosa chinensis
RhsimPtG0004700 Rhododendron simsii
Sabra11G0094200 Salix brachista
Sabra11G0094400 Salix brachista
Sabra11G0094700 Salix brachista
SabraPtG0001100 Salix brachista
SalBow1G4778 Salvia bowleyana
SalBow2G3505 Salvia bowleyana
SalBow7G2811 Salvia bowleyana
Sc07g0006600 Simmondsia chinensis
Sc12g0007870 Simmondsia chinensis
Sc13g0006970 Simmondsia chinensis
Sc13g0007500 Simmondsia chinensis
Sc15g0001760 Simmondsia chinensis
Sc25g0001960 Simmondsia chinensis
Sed0002232 Sechium edule
Sed0007596 Sechium edule
Sed0025233 Sechium edule
SEGI_03653 Sequoiadendron giganteum
SEGI_03722 Sequoiadendron giganteum
SEGI_05748 Sequoiadendron giganteum
SEGI_05822 Sequoiadendron giganteum
SEGI_06599 Sequoiadendron giganteum
SEGI_08469 Sequoiadendron giganteum
SEGI_15504 Sequoiadendron giganteum
SEGI_16956 Sequoiadendron giganteum
SEGI_17161 Sequoiadendron giganteum
SEGI_17353 Sequoiadendron giganteum
SEGI_22877 Sequoiadendron giganteum
SEGI_27193 Sequoiadendron giganteum
SEGI_32358 Sequoiadendron giganteum
SEGI_34500 Sequoiadendron giganteum
SEGI_35563 Sequoiadendron giganteum
SEGI_40022 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32686 Striga asiatica
SGA_v2.0_scaffold12G06131 Striga asiatica
SGA_v2.0_scaffold89G27534 Striga asiatica
SMO086G0059 Selaginella moellendorffii
SMO113G0001 Selaginella moellendorffii
SMO161G0001 Selaginella moellendorffii
SMO168G0001 Selaginella moellendorffii
SMO237G0001 Selaginella moellendorffii
SMO299G0001 Selaginella moellendorffii
Solyc00g500053.1 Solanum lycopersicum
Solyc01g017360.3 Solanum lycopersicum
Solyc01g095950.1 Solanum lycopersicum
Solyc02g067590.2 Solanum lycopersicum
Solyc04g026310.1 Solanum lycopersicum
Solyc08g028740.1 Solanum lycopersicum
Solyc08g028750.1 Solanum lycopersicum
Solyc10g017920.1 Solanum lycopersicum
Solyc12g035870.3 Solanum lycopersicum
Solyc12g035940.1 Solanum lycopersicum
Solyc12g035950.1 Solanum lycopersicum
Sopen12g016150 Solanum pennellii
Thecc.07G188500 Theobroma cacao
TPR.G32479 Trifolium pratense
TPR.G40736 Trifolium pratense
TPR.G4503 Trifolium pratense
TPR.G8281 Trifolium pratense
TWI14G1056 Tripterygium wilfordii
unitig_91.g26498 Utricularia gibba
vmacro22402 Vaccinium macrocarpon
VMungo0647G1325 Vigna mungo
VMungo1015G0001 Vigna mungo
Zm00001eb434940 Zea mays
Zm00001eb435280 Zea mays
Zm00001eb435760 Zea mays
Zm00001eb436840 Zea mays

User provided reference genes

Program Settings