Gene: Nitab4.5_0007104g0040
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0007104g0040
- Transcript Identifier Nitab4.5_0007104g0040.1
- Gene Type Coding gene
- Location Nitab4.5_0007104 : 133790-137794 : positive
Gene Family Information
- ID HOM05D000216
- #Genes/#Species 1874/88
- Phylogenetic origin
- ID ORTHO05D001131
- #Genes/#Species 478/75
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0007104g0040.1
Descriptions
- Description RNA polymerase Rpb2, OB-fold, DNA-directed RNA polymerase, subunit 2, RNA polymerase Rpb2, domain 3, RNA polymerase Rpb2, domain 2, Photosystem antenna protein-like, DNA-directed RNA polymerase, subunit 2, domain 6
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009767 | IEA | InterPro | photosynthetic electron transport chain | |
| GO:0019684 | IEA | InterPro | photosynthesis, light reaction | |
| GO:0006351 | IEA | InterPro | transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016168 | IEA | InterPro | chlorophyll binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0032549 | IEA | InterPro | ribonucleoside binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009521 | IEA | InterPro | photosystem | |
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036001 | Photosystem antenna protein-like superfamily |
| IPR037034 | RNA polymerase Rpb2, domain 2 superfamily |
| IPR014724 | RNA polymerase Rpb2, OB-fold |
| IPR007120 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain |
| IPR037033 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily |
| IPR015712 | DNA-directed RNA polymerase, subunit 2 |
| IPR007642 | RNA polymerase Rpb2, domain 2 |
| IPR007645 | RNA polymerase Rpb2, domain 3 |
| IPR000932 | Photosystem antenna protein-like |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |