Gene: Solyc12g035870.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc12g035870.3
Transcript Identifier Solyc12g035870.3.1
Gene Type Coding gene
Location SL4.0ch12 : 43201300-43203003 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000216
#Genes/#Species 1874/88
Phylogenetic origin

ID ORTHO05D001131
#Genes/#Species 478/75
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Solyc12g035870.3.1
uniprot A0A3Q7JUV2
gene_id Solyc12g035870

Descriptions

Short descriptions
Ortholog descriptions

Description DNA-directed RNA polymerase subunit beta (AHRD V3.3 *-* S8D4Z9_9LAMI)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006351	IEA	GOA Database	transcription, DNA-templated
GO:0006351	IEA	InterPro	transcription, DNA-templated

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	GOA Database	DNA binding
GO:0003677	IEA	InterPro	DNA binding
GO:0003899	IEA	GOA Database	DNA-directed 5'-3' RNA polymerase activity
GO:0003899	IEA	InterPro	DNA-directed 5'-3' RNA polymerase activity
GO:0032549	IEA	GOA Database	ribonucleoside binding
GO:0032549	IEA	InterPro	ribonucleoside binding
GO:0016779	IEA	GOA Database	nucleotidyltransferase activity
GO:0016740	IEA	GOA Database	transferase activity

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR007120	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR037033	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
IPR007641	RNA polymerase Rpb2, domain 7
IPR014724	RNA polymerase Rpb2, OB-fold
IPR015712	DNA-directed RNA polymerase, subunit 2

Mapman id	Description
35.1	not assigned.annotated