Gene: SEGI_05748

General Information

Structural Information

  • Species Sequoiadendron giganteum
  • Gene Identifier SEGI_05748
  • Transcript Identifier SEGI_05748.1
  • Gene Type Coding gene
  • Location chr3 : 595784154-595814908 : negative

Gene Family Information

  • ID HOM05D000216
  • #Genes/#Species 1874/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SEGI_05748.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006354
ISO
PLAZA Integrative OrthologyDNA-templated transcription, elongation ATCG00190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0016651
IEA
InterProoxidoreductase activity, acting on NAD(P)H
GO:0048038
IEA
InterProquinone binding
GO:0051287
IEA
InterProNAD binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
InterProATP binding
GO:0016491
IEA
InterProoxidoreductase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00190
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00190
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid ATCG00190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014724 RNA polymerase Rpb2, OB-fold
IPR001135 NADH-quinone oxidoreductase, subunit D
IPR029014 [NiFe]-hydrogenase, large subunit
IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR007645 RNA polymerase Rpb2, domain 3
IPR000392 NifH/frxC family
IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H
IPR007642 RNA polymerase Rpb2, domain 2
Mapman id Description
35.1 not assigned.annotated