Gene: SEGI_17353
General Information
Structural Information
- Species Sequoiadendron giganteum
- Gene Identifier SEGI_17353
- Transcript Identifier SEGI_17353.1
- Gene Type Coding gene
- Location chr11 : 435135182-435138402 : positive
Gene Family Information
- ID HOM05D000216
- #Genes/#Species 1874/88
- Phylogenetic origin
- ID ORTHO05D001131
- #Genes/#Species 478/75
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid SEGI_17353.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0015986 | IEA | InterPro | ATP synthesis coupled proton transport | |
| GO:1902600 | IEA | InterPro | proton transmembrane transport | |
| GO:0006354 | ISO | PLAZA Integrative Orthology | DNA-templated transcription, elongation | ATCG00190 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0032549 | IEA | InterPro | ribonucleoside binding | |
| GO:0015078 | IEA | InterPro | proton transmembrane transporter activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | ATCG00190 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00190 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045263 | IEA | InterPro | proton-transporting ATP synthase complex, coupling factor F(o) | |
| GO:0033177 | IEA | InterPro | proton-transporting two-sector ATPase complex, proton-transporting domain | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00190 |
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | ATCG00190 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007120 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain |
| IPR015712 | DNA-directed RNA polymerase, subunit 2 |
| IPR000454 | ATP synthase, F0 complex, subunit C |
| IPR038662 | F1F0 ATP synthase subunit C superfamily |
| IPR035921 | F/V-ATP synthase subunit C superfamily |
| IPR037033 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily |
| IPR002379 | V-ATPase proteolipid subunit C-like domain |
| Mapman id | Description |
|---|---|
| 1.1.9.1.2 | Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit b |