Gene: ATR0427G001

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0427G001
  • Transcript Identifier ATR0427G001.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00626 : 7875-9410 : positive

Gene Family Information

  • ID HOM05D000216
  • #Genes/#Species 1874/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00626.1.v1.0
  • pacid 31564676

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006354
ISO
PLAZA Integrative OrthologyDNA-templated transcription, elongation ATCG00190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0032549
IEA
InterProribonucleoside binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00190
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00190
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid ATCG00190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
IPR007645 RNA polymerase Rpb2, domain 3
IPR007642 RNA polymerase Rpb2, domain 2
IPR014724 RNA polymerase Rpb2, OB-fold
IPR015712 DNA-directed RNA polymerase, subunit 2
IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
Mapman id Description
35.1 not assigned.annotated