Gene: BNapus_Darmor_BZH_scaffold_253p00080

General Information

Structural Information

  • Species Brassica napus
  • Gene Identifier BNapus_Darmor_BZH_scaffold_253p00080
  • Transcript Identifier BNapus_Darmor_BZH_scaffold_253p00080
  • Gene Type Coding gene
  • Location BNapus_Darmor_BZH_scaffold_253 : 12038-15271 : negative

Gene Family Information

  • ID HOM05D000216
  • #Genes/#Species 1874/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid BNapus_Darmor_BZH_scaffold_253p00080.1_BnaDAR
  • v5 BnaC03g23920D
  • single_cell_id BNapus-Darmor-BZH-scaffold-253p00080.1-BnaDAR
  • ensembl GSBRNA2T00075494001

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006354
ISO
PLAZA Integrative OrthologyDNA-templated transcription, elongation ATCG00190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0032549
IEA
InterProribonucleoside binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00190
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00190
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid ATCG00190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007642 RNA polymerase Rpb2, domain 2
IPR015712 DNA-directed RNA polymerase, subunit 2
IPR014724 RNA polymerase Rpb2, OB-fold
IPR007641 RNA polymerase Rpb2, domain 7
IPR007644 RNA polymerase, beta subunit, protrusion
IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR037034 RNA polymerase Rpb2, domain 2 superfamily
IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily
IPR007645 RNA polymerase Rpb2, domain 3
Mapman id Description
15.6.1.2.1.2 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoB