Gene: Sed0025233

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0025233
  • Transcript Identifier Sed0025233.1
  • Gene Type Coding gene
  • Location LG13 : 18652975-18666070 : positive

Gene Family Information

  • ID HOM05D000216
  • #Genes/#Species 1874/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0025233.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006412
IEA
InterProtranslation
GO:0015986
IEA
InterProATP synthesis coupled proton transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0015078
IEA
InterProproton transmembrane transporter activity
GO:0032549
IEA
InterProribonucleoside binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0045263
IEA
InterProproton-transporting ATP synthase complex, coupling factor F(o)
GO:0015935
IEA
InterProsmall ribosomal subunit

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007066 RNA polymerase Rpb1, domain 3
IPR007080 RNA polymerase Rpb1, domain 1
IPR014724 RNA polymerase Rpb2, OB-fold
IPR000722 RNA polymerase, alpha subunit
IPR001865 Ribosomal protein S2
IPR007645 RNA polymerase Rpb2, domain 3
IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
IPR000568 ATP synthase, F0 complex, subunit A
IPR007083 RNA polymerase Rpb1, domain 4
IPR038120 RNA polymerase Rpb1, funnel domain superfamily
IPR007641 RNA polymerase Rpb2, domain 7
IPR012756 DNA-directed RNA polymerase, subunit beta''
IPR037034 RNA polymerase Rpb2, domain 2 superfamily
IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid
IPR015712 DNA-directed RNA polymerase, subunit 2
IPR007642 RNA polymerase Rpb2, domain 2
IPR035908 ATP synthase, F0 complex, subunit A superfamily
IPR007081 RNA polymerase Rpb1, domain 5
IPR006592 RNA polymerase, N-terminal
IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily
IPR042102 RNA polymerase Rpb1, domain 3 superfamily
IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
Mapman id Description
1.1.9.1.1 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit a
15.6.1.2.1.2 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoB
15.6.1.2.1.3 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC1
15.6.1.2.1.4 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC2
17.7.2.2.2 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS2