Gene: EL10As12g24016

General Information

Structural Information

  • Species Beta vulgaris
  • Gene Identifier EL10As12g24016
  • Transcript Identifier EL10As12g24016.1
  • Gene Type Coding gene
  • Location Scaffold_0012 : 306171-316500 : negative

Gene Family Information

  • ID HOM05D000216
  • #Genes/#Species 1874/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id EL10As12g24016.EL10_1.0
  • pacid 43412045

Descriptions

  • Description K03046 - DNA-directed RNA polymerase subunit beta' (rpoC)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006354
ISO
PLAZA Integrative OrthologyDNA-templated transcription, elongation ATCG00190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0032549
IEA
InterProribonucleoside binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00190
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00190
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid ATCG00190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000722 RNA polymerase, alpha subunit
IPR007644 RNA polymerase, beta subunit, protrusion
IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily
IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR014724 RNA polymerase Rpb2, OB-fold
IPR007081 RNA polymerase Rpb1, domain 5
IPR038120 RNA polymerase Rpb1, funnel domain superfamily
IPR015712 DNA-directed RNA polymerase, subunit 2
IPR042102 RNA polymerase Rpb1, domain 3 superfamily
IPR007641 RNA polymerase Rpb2, domain 7
IPR007645 RNA polymerase Rpb2, domain 3
IPR012756 DNA-directed RNA polymerase, subunit beta''
IPR007080 RNA polymerase Rpb1, domain 1
IPR006592 RNA polymerase, N-terminal
IPR007642 RNA polymerase Rpb2, domain 2
IPR044893 RNA polymerase Rpb1, clamp domain superfamily
IPR007066 RNA polymerase Rpb1, domain 3
IPR007083 RNA polymerase Rpb1, domain 4
IPR037034 RNA polymerase Rpb2, domain 2 superfamily
IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
Mapman id Description
15.6.1.2.1.2 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoB
15.6.1.2.1.3 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC1
15.6.1.2.1.4 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC2