Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p06680 Brassica napus
A03p33360 Brassica napus
A05p43660 Brassica napus
A08p18690 Brassica napus
A10p24050 Brassica napus
Aa31LG5G13840 Aethionema arabicum
Aa31LG5G14220 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.482 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2242__2243 Anthoceros agrestis
Actinidia03921 Actinidia chinensis
Actinidia35760 Actinidia chinensis
Actinidia37819 Actinidia chinensis
Ah.04g153620 Amaranthus hybridus
Ah.09g232220 Amaranthus hybridus
AL3G13510 Arabidopsis lyrata
AL6G25340 Arabidopsis lyrata
Aqoxy1G00512 Aquilegia oxysepala
Aqoxy3G02862 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B3FMDE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P30KPE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SUJ4K6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0KP8I Arachis hypogaea
AT3G03710 Arabidopsis thaliana
AT5G14580 Arabidopsis thaliana
ATR0078G007 Amborella trichopoda
ATR0697G078 Amborella trichopoda
Atru.chr2.1515 Acer truncatum
Atru.chr2.1516 Acer truncatum
Atru.chr2.1517 Acer truncatum
Atru.chr6.2257 Acer truncatum
Atru.chr6.2348 Acer truncatum
AUR62018085 Chenopodium quinoa
AUR62018086 Chenopodium quinoa
AUR62032008 Chenopodium quinoa
AUR62033083 Chenopodium quinoa
AUR62041598 Chenopodium quinoa
BcaB01g05104 Brassica carinata
BcaB01g05105 Brassica carinata
BcaB03g12690 Brassica carinata
BcaB03g12698 Brassica carinata
BcaB04g19361 Brassica carinata
BcaC01g01085 Brassica carinata
BcaC01g01096 Brassica carinata
BcaC01g04394 Brassica carinata
BcaC04g19027 Brassica carinata
BcaC05g29911 Brassica carinata
BcaC05g30255 Brassica carinata
BcaC05g30538 Brassica carinata
BcaNung05498 Brassica carinata
BcaNung06921 Brassica carinata
BolC3t13271H Brassica oleracea
BolC3t16325H Brassica oleracea
BolC3t21116H Brassica oleracea
BolC5t34986H Brassica oleracea
BolC9t59092H Brassica oleracea
BolC9t59104H Brassica oleracea
BraA03t10002Z Brassica rapa
BraA03t12507Z Brassica rapa
BraA05t23104Z Brassica rapa
BraA08t33830Z Brassica rapa
BraA10t44468Z Brassica rapa
C03p07710 Brassica napus
C03p40600 Brassica napus
C03p88050 Brassica napus
C03p88070 Brassica napus
C05p63240 Brassica napus
C09p62520 Brassica napus
C09p62660 Brassica napus
CAN.G206.5 Capsicum annuum
CAN.G9.1 Capsicum annuum
CANSAT64G2333 Cannabis sativa
CARHR077770 Cardamine hirsuta
CARHR198740 Cardamine hirsuta
Carub.0003s0287 Capsella rubella
Carub.0006s1275 Capsella rubella
Ca_04173_v3 Cicer arietinum L.
Ca_08312_v3 Cicer arietinum L.
CBR_g30163 Chara braunii
CBR_g55864 Chara braunii
CBR_g5744 Chara braunii
Cc06_g21470 Coffea canephora
Cc07_g01920 Coffea canephora
CDE04G2132 Ceratophyllum demersum
CDE05G1018 Ceratophyllum demersum
CDE05G1403 Ceratophyllum demersum
CDE05G1995 Ceratophyllum demersum
CDE06G2728 Ceratophyllum demersum
CDE07G0416 Ceratophyllum demersum
Cfa007400 Carpinus fangiana
Cfa017714 Carpinus fangiana
Ciclev10014159m.g Citrus clementina
Ciclev10019242m.g Citrus clementina
Ciclev10024655m.g Citrus clementina
CiPaw.03G041400 Carya illinoinensis
CiPaw.03G041500 Carya illinoinensis
CiPaw.09G166700 Carya illinoinensis
ClCG10G014020 Citrullus lanatus
ClCG10G015830 Citrullus lanatus
COL.COLO4_28638 Corchorus olitorius
COL.COLO4_28639 Corchorus olitorius
COL.COLO4_29057 Corchorus olitorius
Cpa.g.c42620 Carica papaya
Cpa.g.sc108.35 Carica papaya
Cpa.g.sc161.36 Carica papaya
Cpa.g.sc1931.1 Carica papaya
Cre04.g214501 Chlamydomonas reinhardtii
CsaV3_3G040620 Cucumis sativus L.
CsaV3_3G042650 Cucumis sativus L.
CSS0003504 Camellia sinensis var. sinensis
CSS0007089 Camellia sinensis var. sinensis
CSS0007819 Camellia sinensis var. sinensis
CSS0008485 Camellia sinensis var. sinensis
CSS0011286 Camellia sinensis var. sinensis
CSS0018850 Camellia sinensis var. sinensis
CSS0021143 Camellia sinensis var. sinensis
CSS0037663 Camellia sinensis var. sinensis
CSS0041842 Camellia sinensis var. sinensis
CSS0042221 Camellia sinensis var. sinensis
DCAR_016962 Daucus carota
DCAR_021710 Daucus carota
Dinv13788 Davidia involucrata
Dinv25043 Davidia involucrata
Dinv33468 Davidia involucrata
Duzib147G1710 Durio zibethinus
Duzib177G0738 Durio zibethinus
ECA238G2164 Erigeron canadensis
EL10Ac3g06617 Beta vulgaris
EL10Ac8g19521 Beta vulgaris
Eucgr.A02140 Eucalyptus grandis
Eucgr.J02224 Eucalyptus grandis
FAN02G2577 Fragaria x ananassa
FAN09G1917 Fragaria x ananassa
FAN09G4671 Fragaria x ananassa
FAN14G2665 Fragaria x ananassa
FAN19G2763 Fragaria x ananassa
FAN26G0197 Fragaria x ananassa
FAN28G1730 Fragaria x ananassa
FvH4_1g28580 Fragaria vesca
FvH4_6g51050 Fragaria vesca
Glyma.05G005200 Glycine max
Glyma.16G036100 Glycine max
Glyma.19G005800 Glycine max
Glyma.19G116700 Glycine max
Gohir.A09G028200 Gossypium hirsutum
Gohir.A11G229100 Gossypium hirsutum
Gohir.D09G027600 Gossypium hirsutum
Gohir.D11G241200 Gossypium hirsutum
Gorai.006G032100 Gossypium raimondii
Gorai.007G255300 Gossypium raimondii
GSVIVG01029958001 Vitis vinifera
GSVIVG01032436001 Vitis vinifera
HanXRQChr04g0097721 Helianthus annuus
HanXRQChr04g0117851 Helianthus annuus
HanXRQChr05g0138681 Helianthus annuus
HanXRQChr07g0196271 Helianthus annuus
HanXRQChr14g0453641 Helianthus annuus
HanXRQChr15g0496011 Helianthus annuus
HanXRQChr17g0548341 Helianthus annuus
Haze_14705 Corylus avellana
Haze_20409 Corylus avellana
Hma1.2p1_0214F.1_g090780 Hydrangea macrophylla
Hma1.2p1_0858F.1_g229210 Hydrangea macrophylla
HPP92_011646 Vanilla planifolia
HPP92_014137 Vanilla planifolia
HPP92_014138 Vanilla planifolia
HPP92_014245 Vanilla planifolia
HPP92_026507 Vanilla planifolia
HPP92_026508 Vanilla planifolia
Hund21260 Selenicereus undatus
Lalb_Chr06g0175871 Lupinus albus
Lalb_Chr14g0364831 Lupinus albus
Lj1A1072T23 Lonicera japonica
Lj1A1072T24 Lonicera japonica
Lj1g0016812 Lotus japonicus
Lj2g0027560 Lotus japonicus
Lj7C738T14 Lonicera japonica
Lsat_1_v5_gn_0_19560 Lactuca sativa
Lsat_1_v5_gn_0_46020 Lactuca sativa
Lsat_1_v5_gn_2_103701 Lactuca sativa
Manes.08G153100 Manihot esculenta
Manes.15G166700 Manihot esculenta
Mapoly0003s0246 Marchantia polymorpha
Mapoly0041s0034 Marchantia polymorpha
MBI11_g10545_MAGBIO Magnolia biondii
MBI16_g05474_MAGBIO Magnolia biondii
MCO09G785 Micromonas commoda
MCO10G297 Micromonas commoda
MD12G1011400 Malus domestica
MD14G1008000 Malus domestica
MD17G1031200 Malus domestica
Medtr6g005460 Medicago truncatula
Medtr7g086640 Medicago truncatula
MELO3C009794.2 Cucumis melo
MELO3C009975.2 Cucumis melo
MELO3C034840.2 Cucumis melo
Migut.A00069 Erythranthe guttata
Migut.H00092 Erythranthe guttata
Migut.J01542 Erythranthe guttata
MSTRG.24029 Avicennia marina
Nitab4.5_0000098g0260 Nicotiana tabacum
Nitab4.5_0000098g0270 Nicotiana tabacum
Nitab4.5_0000098g0280 Nicotiana tabacum
Nitab4.5_0002739g0020 Nicotiana tabacum
Nitab4.5_0005671g0040 Nicotiana tabacum
Nitab4.5_0005671g0050 Nicotiana tabacum
Nitab4.5_0011492g0010 Nicotiana tabacum
Nn2g14555 Nelumbo nucifera
Nn4g22702 Nelumbo nucifera
Oeu039243.2 Olea europaea
Oeu044206.2 Olea europaea
Oeu054614.1 Olea europaea
Os02g0617700 Oryza sativa ssp. japonica
Os07g0168000 Oryza sativa ssp. japonica
Peaxi162Scf00129g01334 Petunia axillaris
Peaxi162Scf01421g00011 Petunia axillaris
Peaxi162Scf01421g00012 Petunia axillaris
PGR042G1483 Punica granatum
PGR083G0169 Punica granatum
PGSC0003DMG400000516 Solanum tuberosum
PGSC0003DMG400006644 Solanum tuberosum
PGSC0003DMG401007628 Solanum tuberosum
Phvul.001G105633 Phaseolus vulgaris
Phvul.004G011100 Phaseolus vulgaris
Potri.001G347900 Populus trichocarpa
Potri.013G065700 Populus trichocarpa
Potri.019G040100 Populus trichocarpa
Pp3c1_22150 Physcomitrium patens
Pp3c2_19900 Physcomitrium patens
Pp3c6_15550 Physcomitrium patens
PRCOL_00002921 Prasinoderma coloniale
Prupe.3G288400 Prunus persica
Prupe.7G014600 Prunus persica
Psat0s2078g0040 Pisum sativum
Psat1g190960 Pisum sativum
Psat3g086960 Pisum sativum
PSO063G7027 Papaver somniferum
PSO135G0797 Papaver somniferum
PSO135G0917 Papaver somniferum
PSO339G1487 Papaver somniferum
PSO384G0879 Papaver somniferum
PSO384G2388 Papaver somniferum
PSO384G3331 Papaver somniferum
PSO585G0024 Papaver somniferum
PSO675G8743 Papaver somniferum
PSO832G0286 Papaver somniferum
PSO832G0633 Papaver somniferum
QL02p075394 Quercus lobata
QL07p017523 Quercus lobata
QL07p017571 Quercus lobata
RcHm_v2.0_Chr1g0348801 Rosa chinensis
RcHm_v2.0_Chr2g0172601 Rosa chinensis
RcHm_v2.0_Chr3g0496111 Rosa chinensis
RcHm_v2.0_Chr5g0066701 Rosa chinensis
RcHm_v2.0_Chr6g0274561 Rosa chinensis
Rhsim03G0049500 Rhododendron simsii
Rhsim08G0052300 Rhododendron simsii
Sabra13G0057400 Salix brachista
Sabra16G0227400 Salix brachista
Sabra19G0050400 Salix brachista
SalBow1G8403 Salvia bowleyana
SalBow6G0718 Salvia bowleyana
SalBow6G2962 Salvia bowleyana
Sc07g0007450 Simmondsia chinensis
Sc16g0003290 Simmondsia chinensis
Sed0008218 Sechium edule
Sed0013184 Sechium edule
SEGI_01031 Sequoiadendron giganteum
SEGI_03272 Sequoiadendron giganteum
SEGI_23097 Sequoiadendron giganteum
SEGI_26170 Sequoiadendron giganteum
SEGI_27929 Sequoiadendron giganteum
SEGI_31182 Sequoiadendron giganteum
SEGI_37668 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34895 Striga asiatica
SGA_v2.0_scaffold69G23217 Striga asiatica
SHI24542 Sapria himalayana
SMO351G0216 Selaginella moellendorffii
SMO364G0479 Selaginella moellendorffii
Solyc02g086600.3 Solanum lycopersicum
Solyc08g066120.4 Solanum lycopersicum
Solyc08g066140.3 Solanum lycopersicum
Sopen02g031360 Solanum pennellii
Sopen08g019820 Solanum pennellii
Sp2g03020 Schrenkiella parvula
Sp3g02680 Schrenkiella parvula
Sp6g29450 Schrenkiella parvula
Sp7g30470 Schrenkiella parvula
TAR629G1390 Trochodendron aralioides
TAR633G2049 Trochodendron aralioides
THA.LOC104802884 Tarenaya hassleriana
Thecc.04G014200 Theobroma cacao
Thecc.05G242400 Theobroma cacao
Thhalv10012572m.g Eutrema salsugineum
Thhalv10020014m.g Eutrema salsugineum
Thhalv10022162m.g Eutrema salsugineum
TPR.G33737 Trifolium pratense
TPR.G34788 Trifolium pratense
TPR.G8718 Trifolium pratense
TWI12G0035 Tripterygium wilfordii
TWI32G0897 Tripterygium wilfordii
TWI56G0079 Tripterygium wilfordii
unitig_52.g17662 Utricularia gibba
unitig_60.g25486 Utricularia gibba
vmacro07652 Vaccinium macrocarpon
vmacro18267 Vaccinium macrocarpon
VMungo0464G1155 Vigna mungo
VMungo1383G0989 Vigna mungo
Zm00001eb247190 Zea mays
Zm00001eb300920 Zea mays

User provided reference genes

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