Gene: Cpa.g.sc1931.1
General Information
Structural Information
- Species Carica papaya
- Gene Identifier Cpa.g.sc1931.1
- Transcript Identifier Cpa.t.sc1931.1
- Gene Type Coding gene
- Location supercontig_1931 : 7136-8932 : negative
Gene Family Information
- ID HOM05D002168
- #Genes/#Species 309/100
- Phylogenetic origin
- ID ORTHO05D002277
- #Genes/#Species 301/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 16412232
- tid PAC:16412232
- id evm.TU.supercontig_1931.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006402 | IEA | InterPro | mRNA catabolic process | |
| GO:0006396 | ISO | PLAZA Homology (enrichment) | RNA processing | HOM05D002168 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0004654 | IEA | InterPro | polyribonucleotide nucleotidyltransferase activity | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D002168 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015847 | Exoribonuclease, phosphorolytic domain 2 |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR001247 | Exoribonuclease, phosphorolytic domain 1 |
| IPR036345 | Exoribonuclease, PH domain 2 superfamily |
| IPR027408 | PNPase/RNase PH domain superfamily |
| IPR012162 | Polyribonucleotide nucleotidyltransferase |
| Mapman id | Description |
|---|---|
| 16.11.1.1 | RNA processing.organelle machinery.ribonuclease activities.polynucleotide phosphorylase (PNP) |