Gene: Os02g0617700

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0617700
  • Transcript Identifier Os02t0617700-01
  • Gene Type Coding gene
  • Location chr02 : 24531531-24533642 : negative

Gene Family Information

  • ID HOM05D002168
  • #Genes/#Species 309/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0617700-01
  • MSU-ID LOC_Os02g40460.1
  • uniprot Q6KAI0

Descriptions

  • Description Nucleic acid-binding, OB-fold domain containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
GOA DatabasemRNA catabolic process
GO:0006402
IEA
InterPromRNA catabolic process
GO:0000965
IBA
GOA Databasemitochondrial RNA 3'-end processing
GO:0000958
IBA
GOA Databasemitochondrial mRNA catabolic process
GO:0006401
IBA
GOA DatabaseRNA catabolic process
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0090503
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, exonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004654
IBA
IEA
GOA Databasepolyribonucleotide nucleotidyltransferase activity
GO:0004654
IEA
InterPropolyribonucleotide nucleotidyltransferase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0000175
IBA
GOA Database3'-5'-exoribonuclease activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
GOA Databasecytosol
GO:0005739
IBA
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012162 Polyribonucleotide nucleotidyltransferase
IPR012340 Nucleic acid-binding, OB-fold
IPR022967 RNA-binding domain, S1
IPR003029 S1 domain
Mapman id Description
16.11.1.1 RNA processing.organelle machinery.ribonuclease activities.polynucleotide phosphorylase (PNP)