Gene: Sc16g0003290

General Information

Structural Information

  • Species Simmondsia chinensis
  • Gene Identifier Sc16g0003290
  • Transcript Identifier Sc16g0003290.01
  • Gene Type Coding gene
  • Location GWHAASQ00000016 : 6740384-6756586 : negative

Gene Family Information

  • ID HOM05D002168
  • #Genes/#Species 309/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sc16g0003290.01

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0006402
IEA
InterPromRNA catabolic process
GO:0000957
ISO
PLAZA Integrative Orthologymitochondrial RNA catabolic process AT5G14580
GO:0000963
ISO
PLAZA Integrative Orthologymitochondrial RNA processing AT5G14580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0004654
IEA
InterPropolyribonucleotide nucleotidyltransferase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0000175
ISO
PLAZA Integrative Orthology3'-5'-exoribonuclease activity AT5G14580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022967 RNA-binding domain, S1
IPR012340 Nucleic acid-binding, OB-fold
IPR036345 Exoribonuclease, PH domain 2 superfamily
IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain
IPR012162 Polyribonucleotide nucleotidyltransferase
IPR036612 K Homology domain, type 1 superfamily
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR015847 Exoribonuclease, phosphorolytic domain 2
IPR003029 S1 domain
IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily
IPR027408 PNPase/RNase PH domain superfamily
IPR001247 Exoribonuclease, phosphorolytic domain 1
Mapman id Description
16.11.1.1 RNA processing.organelle machinery.ribonuclease activities.polynucleotide phosphorylase (PNP)